RNA–Protein interactions for RNA: ENST00000489135.5

TMCO4-205, Transcript of transmembrane and coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene TMCO4, Length 1,150 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4-205ENST00000489135 NISCHQ9Y2I1 1504 aa36.38■■■■□ 3.41
TMCO4-205ENST00000489135 ABCC9O60706 1549 aa32.97■■■□□ 2.87
TMCO4-205ENST00000489135 CCDC180Q9P1Z9 1646 aa32.33■■■□□ 2.77
TMCO4-205ENST00000489135 DNAJC5BQ9UF47 199 aa32.05■■■□□ 2.72
TMCO4-205ENST00000489135 RB1CC1Q8TDY2 1594 aa30.82■■■□□ 2.52
TMCO4-205ENST00000489135 DNAJC5Q9H3Z4 198 aa30.43■■■□□ 2.46
TMCO4-205ENST00000489135 PABPN1Q86U42 306 aaKnown RBP eCLIP30.41■■■□□ 2.46
TMCO4-205ENST00000489135 ZCCHC6Q5VYS8 1495 aaKnown RBP30.36■■■□□ 2.45
TMCO4-205ENST00000489135 UNC13AQ9UPW8 1703 aa30.29■■■□□ 2.44
TMCO4-205ENST00000489135 NACADO15069 1562 aa30.26■■■□□ 2.43
TMCO4-205ENST00000489135 DCAF8L2P0C7V8 631 aa30.21■■■□□ 2.43
TMCO4-205ENST00000489135 MYO15BQ96JP2 1530 aa30.19■■■□□ 2.42
TMCO4-205ENST00000489135 DCAF1Q9Y4B6 1507 aa30.15■■■□□ 2.42
TMCO4-205ENST00000489135 BICRAQ9NZM4 1560 aa29.97■■■□□ 2.39
TMCO4-205ENST00000489135 CECR2Q9BXF3 1484 aa29.83■■■□□ 2.37
TMCO4-205ENST00000489135 CC2D2AQ9P2K1 1620 aa29.76■■■□□ 2.35
TMCO4-205ENST00000489135 SCRIBQ14160 1630 aa29.42■■■□□ 2.3
TMCO4-205ENST00000489135 SHROOM4Q9ULL8 1493 aa29.37■■■□□ 2.29
TMCO4-205ENST00000489135 EIF4G1Q04637 1599 aaKnown RBP29.35■■■□□ 2.29
TMCO4-205ENST00000489135 CUX2O14529 1486 aa28.97■■■□□ 2.23
TMCO4-205ENST00000489135 TRIM41Q8WV44 630 aa28.59■■■□□ 2.17
TMCO4-205ENST00000489135 ERCC6Q03468 1493 aa28.58■■■□□ 2.17
TMCO4-205ENST00000489135 SMARCA4P51532 1647 aa28.21■■■□□ 2.11
TMCO4-205ENST00000489135 BAZ1AQ9NRL2 1556 aaPredicted RBP28.16■■■□□ 2.1
TMCO4-205ENST00000489135 MROH2BQ7Z745 1585 aa28.03■■■□□ 2.08
TMCO4-205ENST00000489135 THOC2Q8NI27 1593 aaKnown RBP28■■■□□ 2.07
TMCO4-205ENST00000489135 PEG3Q9GZU2 1588 aa27.97■■■□□ 2.07
TMCO4-205ENST00000489135 NESP48681 1621 aa27.94■■■□□ 2.06
TMCO4-205ENST00000489135 ATAD2BQ9ULI0 1458 aa27.94■■■□□ 2.06
TMCO4-205ENST00000489135 SMARCA2P51531 1590 aa27.92■■■□□ 2.06
TMCO4-205ENST00000489135 NCAPD3P42695 1498 aa27.89■■■□□ 2.06
TMCO4-205ENST00000489135 HMGXB3Q12766 1538 aa27.82■■■□□ 2.04
TMCO4-205ENST00000489135 WIZO95785 1651 aa27.81■■■□□ 2.04
TMCO4-205ENST00000489135 RSF1Q96T23 1441 aaPredicted RBP27.76■■■□□ 2.04
TMCO4-205ENST00000489135 BAZ1BQ9UIG0 1483 aaKnown RBP27.69■■■□□ 2.02
TMCO4-205ENST00000489135 KIF21AQ7Z4S6 1674 aa27.67■■■□□ 2.02
TMCO4-205ENST00000489135 LAMC3Q9Y6N6 1575 aa27.56■■■□□ 2
TMCO4-205ENST00000489135 TOP2AP11388 1531 aaKnown RBP27.46■■□□□ 1.99
TMCO4-205ENST00000489135 PDS5BQ9NTI5 1447 aa27.36■■□□□ 1.97
TMCO4-205ENST00000489135 OSCARQ8IYS5 282 aa27.34■■□□□ 1.97
TMCO4-205ENST00000489135 RIMBP3CA6NJZ7 1639 aa27.3■■□□□ 1.96
TMCO4-205ENST00000489135 RIMBP3BA6NNM3 1639 aa27.3■■□□□ 1.96
TMCO4-205ENST00000489135 RIMBP3Q9UFD9 1639 aa27.3■■□□□ 1.96
TMCO4-205ENST00000489135 MRC2Q9UBG0 1479 aa27.25■■□□□ 1.95
TMCO4-205ENST00000489135 WDR62O43379 1518 aa27.25■■□□□ 1.95
TMCO4-205ENST00000489135 AEBP2Q6ZN18 517 aaPredicted RBP27.23■■□□□ 1.95
TMCO4-205ENST00000489135 CCDC88BA6NC98 1476 aa27.12■■□□□ 1.93
TMCO4-205ENST00000489135 SUPT5HO00267 1087 aaKnown RBP27.1■■□□□ 1.93
TMCO4-205ENST00000489135 CADPSQ9ULU8 1353 aa27.07■■□□□ 1.92
TMCO4-205ENST00000489135 ARHGEF11O15085 1522 aa27.01■■□□□ 1.91
TMCO4-205ENST00000489135 PRDM2Q13029 1718 aa27.01■■□□□ 1.91
TMCO4-205ENST00000489135 TRHP20396 242 aaPredicted RBP26.99■■□□□ 1.91
TMCO4-205ENST00000489135 CFTRP13569 1480 aa26.99■■□□□ 1.91
TMCO4-205ENST00000489135 CEP164Q9UPV0 1460 aa26.87■■□□□ 1.89
TMCO4-205ENST00000489135 CYB5RLQ6IPT4 315 aa26.81■■□□□ 1.88
TMCO4-205ENST00000489135 FANCD2Q9BXW9 1451 aa26.79■■□□□ 1.88
TMCO4-205ENST00000489135 ARAP1Q96P48 1450 aa26.64■■□□□ 1.86
TMCO4-205ENST00000489135 URB2Q14146 1524 aaKnown RBP26.59■■□□□ 1.85
TMCO4-205ENST00000489135 CHD1O14646 1710 aa26.48■■□□□ 1.83
TMCO4-205ENST00000489135 ZNF608Q9ULD9 1512 aaPredicted RBP26.47■■□□□ 1.83
TMCO4-205ENST00000489135 DNMBPQ6XZF7 1577 aa26.39■■□□□ 1.82
TMCO4-205ENST00000489135 TOPBP1Q92547 1522 aa26.39■■□□□ 1.81
TMCO4-205ENST00000489135 ABCC8Q09428 1581 aa26.37■■□□□ 1.81
TMCO4-205ENST00000489135 IFT140Q96RY7 1462 aa26.36■■□□□ 1.81
TMCO4-205ENST00000489135 EIF4G3O43432 1585 aaKnown RBP26.34■■□□□ 1.81
TMCO4-205ENST00000489135 CUX1P39880 1505 aa26.29■■□□□ 1.8
TMCO4-205ENST00000489135 ILDR1Q86SU0 546 aaPredicted RBP26.27■■□□□ 1.8
TMCO4-205ENST00000489135 BIVM-ERCC5R4GMW8 1640 aa26.2■■□□□ 1.78
TMCO4-205ENST00000489135 POLA1P09884 1462 aaPredicted RBP26.17■■□□□ 1.78
TMCO4-205ENST00000489135 TOP2BQ02880 1626 aa26.16■■□□□ 1.78
TMCO4-205ENST00000489135 SYNJ1O43426 1573 aa26.16■■□□□ 1.78
TMCO4-205ENST00000489135 TARBP1Q13395 1621 aaKnown RBP26.15■■□□□ 1.78
TMCO4-205ENST00000489135 WRNQ14191 1432 aaPredicted RBP eCLIP26.14■■□□□ 1.77
TMCO4-205ENST00000489135 FGD5Q6ZNL6 1462 aa26.13■■□□□ 1.77
TMCO4-205ENST00000489135 FBLN2P98095 1184 aa26.13■■□□□ 1.77
TMCO4-205ENST00000489135 WDR97A6NE52 1622 aa26.06■■□□□ 1.76
TMCO4-205ENST00000489135 AQRO60306 1485 aaKnown RBP eCLIP26.04■■□□□ 1.76
TMCO4-205ENST00000489135 RAD54L2Q9Y4B4 1467 aa26.03■■□□□ 1.76
TMCO4-205ENST00000489135 CLASP1Q7Z460 1538 aa26.03■■□□□ 1.76
TMCO4-205ENST00000489135 SOGA1O94964 1423 aa26.01■■□□□ 1.75
TMCO4-205ENST00000489135 ABCA10Q8WWZ4 1543 aa25.9■■□□□ 1.74
TMCO4-205ENST00000489135 TDRD9Q8NDG6 1382 aaKnown RBP25.86■■□□□ 1.73
TMCO4-205ENST00000489135 ABCA5Q8WWZ7 1642 aa25.85■■□□□ 1.73
TMCO4-205ENST00000489135 GAPVD1Q14C86 1478 aa25.82■■□□□ 1.72
TMCO4-205ENST00000489135 PBRM1Q86U86 1689 aa25.82■■□□□ 1.72
TMCO4-205ENST00000489135 KIF13AQ9H1H9 1805 aa25.78■■□□□ 1.72
TMCO4-205ENST00000489135 SNAPC4Q5SXM2 1469 aa25.77■■□□□ 1.72
TMCO4-205ENST00000489135 GRIN2BQ13224 1484 aa25.69■■□□□ 1.7
TMCO4-205ENST00000489135 CHMP7Q8WUX9 453 aaPredicted RBP25.69■■□□□ 1.7
TMCO4-205ENST00000489135 MAGI1Q96QZ7 1491 aaPredicted RBP25.66■■□□□ 1.7
TMCO4-205ENST00000489135 KDM4FA0A1W2PPD8 638 aa25.63■■□□□ 1.69
TMCO4-205ENST00000489135 ERICH3Q5RHP9 1530 aa25.61■■□□□ 1.69
TMCO4-205ENST00000489135 SYNJ2O15056 1496 aa25.59■■□□□ 1.69
TMCO4-205ENST00000489135 KIF27Q86VH2 1401 aa25.55■■□□□ 1.68
TMCO4-205ENST00000489135 ADAMTS12P58397 1594 aa25.55■■□□□ 1.68
TMCO4-205ENST00000489135 ERCC6L2Q5T890 1561 aa25.52■■□□□ 1.68
TMCO4-205ENST00000489135 CHIC1Q5VXU3 224 aa25.5■■□□□ 1.67
TMCO4-205ENST00000489135 RUSC2Q8N2Y8 1516 aa25.47■■□□□ 1.67
TMCO4-205ENST00000489135 CUL7Q14999 1698 aa25.46■■□□□ 1.67
TMCO4-205ENST00000489135 IGF1RP08069 1367 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms