RNA–Protein interactions for RNA: ENST00000489068.1

PABPC1L-215, Transcript of poly(A) binding protein cytoplasmic 1 like, humanhuman

TSL 3

Gene PABPC1L, Length 442 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1L-215ENST00000489068 NISCHQ9Y2I1 1504 aa30.15■■■□□ 2.42
PABPC1L-215ENST00000489068 ABCC9O60706 1549 aa27.62■■■□□ 2.01
PABPC1L-215ENST00000489068 CCDC180Q9P1Z9 1646 aa27.44■■□□□ 1.98
PABPC1L-215ENST00000489068 RB1CC1Q8TDY2 1594 aa26.24■■□□□ 1.79
PABPC1L-215ENST00000489068 DNAJC5BQ9UF47 199 aa26.06■■□□□ 1.76
PABPC1L-215ENST00000489068 NACADO15069 1562 aa25.91■■□□□ 1.74
PABPC1L-215ENST00000489068 UNC13AQ9UPW8 1703 aa25.77■■□□□ 1.72
PABPC1L-215ENST00000489068 DCAF8L2P0C7V8 631 aa25.54■■□□□ 1.68
PABPC1L-215ENST00000489068 PABPN1Q86U42 306 aaKnown RBP eCLIP25.53■■□□□ 1.682e-8■■□□□ 11.6
PABPC1L-215ENST00000489068 BICRAQ9NZM4 1560 aa25.39■■□□□ 1.66
PABPC1L-215ENST00000489068 MYO15BQ96JP2 1530 aa25.38■■□□□ 1.65
PABPC1L-215ENST00000489068 SHROOM4Q9ULL8 1493 aa25.09■■□□□ 1.61
PABPC1L-215ENST00000489068 CC2D2AQ9P2K1 1620 aa25.01■■□□□ 1.59
PABPC1L-215ENST00000489068 CECR2Q9BXF3 1484 aa24.93■■□□□ 1.58
PABPC1L-215ENST00000489068 ZCCHC6Q5VYS8 1495 aaKnown RBP24.92■■□□□ 1.58
PABPC1L-215ENST00000489068 DCAF1Q9Y4B6 1507 aa24.91■■□□□ 1.58
PABPC1L-215ENST00000489068 SCRIBQ14160 1630 aa24.88■■□□□ 1.57
PABPC1L-215ENST00000489068 EIF4G1Q04637 1599 aaKnown RBP24.84■■□□□ 1.57
PABPC1L-215ENST00000489068 DNAJC5Q9H3Z4 198 aa24.3■■□□□ 1.48
PABPC1L-215ENST00000489068 CUX2O14529 1486 aa24.02■■□□□ 1.44
PABPC1L-215ENST00000489068 ERCC6Q03468 1493 aa23.94■■□□□ 1.42
PABPC1L-215ENST00000489068 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
PABPC1L-215ENST00000489068 HMGXB3Q12766 1538 aa23.73■■□□□ 1.39
PABPC1L-215ENST00000489068 SMARCA2P51531 1590 aa23.72■■□□□ 1.39
PABPC1L-215ENST00000489068 ATAD2BQ9ULI0 1458 aa23.7■■□□□ 1.38
PABPC1L-215ENST00000489068 SMARCA4P51532 1647 aa23.7■■□□□ 1.38
PABPC1L-215ENST00000489068 NESP48681 1621 aa23.59■■□□□ 1.37
PABPC1L-215ENST00000489068 THOC2Q8NI27 1593 aaKnown RBP23.57■■□□□ 1.36
PABPC1L-215ENST00000489068 BAZ1BQ9UIG0 1483 aaKnown RBP23.52■■□□□ 1.36
PABPC1L-215ENST00000489068 BAZ1AQ9NRL2 1556 aaPredicted RBP23.51■■□□□ 1.35
PABPC1L-215ENST00000489068 LAMC3Q9Y6N6 1575 aa23.49■■□□□ 1.35
PABPC1L-215ENST00000489068 KIF21AQ7Z4S6 1674 aa23.48■■□□□ 1.35
PABPC1L-215ENST00000489068 PEG3Q9GZU2 1588 aa23.44■■□□□ 1.34
PABPC1L-215ENST00000489068 PDS5BQ9NTI5 1447 aa23.27■■□□□ 1.32
PABPC1L-215ENST00000489068 MROH2BQ7Z745 1585 aa23.2■■□□□ 1.3
PABPC1L-215ENST00000489068 TRIM41Q8WV44 630 aa23.14■■□□□ 1.29
PABPC1L-215ENST00000489068 MRC2Q9UBG0 1479 aa23.12■■□□□ 1.29
PABPC1L-215ENST00000489068 WDR62O43379 1518 aa23.11■■□□□ 1.29
PABPC1L-215ENST00000489068 CADPSQ9ULU8 1353 aa23.06■■□□□ 1.28
PABPC1L-215ENST00000489068 WIZO95785 1651 aa23.01■■□□□ 1.27
PABPC1L-215ENST00000489068 CEP164Q9UPV0 1460 aa22.98■■□□□ 1.27
PABPC1L-215ENST00000489068 FANCD2Q9BXW9 1451 aa22.86■■□□□ 1.25
PABPC1L-215ENST00000489068 PRDM2Q13029 1718 aa22.83■■□□□ 1.25
PABPC1L-215ENST00000489068 CFTRP13569 1480 aa22.74■■□□□ 1.23
PABPC1L-215ENST00000489068 OSCARQ8IYS5 282 aa22.74■■□□□ 1.23
PABPC1L-215ENST00000489068 URB2Q14146 1524 aaKnown RBP22.68■■□□□ 1.22
PABPC1L-215ENST00000489068 TOP2AP11388 1531 aaKnown RBP22.67■■□□□ 1.22
PABPC1L-215ENST00000489068 RIMBP3CA6NJZ7 1639 aa22.66■■□□□ 1.22
PABPC1L-215ENST00000489068 RIMBP3BA6NNM3 1639 aa22.66■■□□□ 1.22
PABPC1L-215ENST00000489068 RIMBP3Q9UFD9 1639 aa22.66■■□□□ 1.22
PABPC1L-215ENST00000489068 RSF1Q96T23 1441 aaPredicted RBP22.52■■□□□ 1.2
PABPC1L-215ENST00000489068 IFT140Q96RY7 1462 aa22.49■■□□□ 1.19
PABPC1L-215ENST00000489068 ARHGEF11O15085 1522 aa22.48■■□□□ 1.19
PABPC1L-215ENST00000489068 EIF4G3O43432 1585 aaKnown RBP22.46■■□□□ 1.19
PABPC1L-215ENST00000489068 CHD1O14646 1710 aa22.44■■□□□ 1.18
PABPC1L-215ENST00000489068 ZNF608Q9ULD9 1512 aaPredicted RBP22.44■■□□□ 1.18
PABPC1L-215ENST00000489068 TOPBP1Q92547 1522 aa22.4■■□□□ 1.18
PABPC1L-215ENST00000489068 ABCC8Q09428 1581 aa22.36■■□□□ 1.17
PABPC1L-215ENST00000489068 DNMBPQ6XZF7 1577 aa22.34■■□□□ 1.17
PABPC1L-215ENST00000489068 CCDC88BA6NC98 1476 aa22.32■■□□□ 1.16
PABPC1L-215ENST00000489068 TARBP1Q13395 1621 aaKnown RBP22.27■■□□□ 1.16
PABPC1L-215ENST00000489068 CYB5RLQ6IPT4 315 aa22.22■■□□□ 1.15
PABPC1L-215ENST00000489068 ARAP1Q96P48 1450 aa22.2■■□□□ 1.14
PABPC1L-215ENST00000489068 AQRO60306 1485 aaKnown RBP eCLIP22.17■■□□□ 1.146e-6■■■■□ 25.1
PABPC1L-215ENST00000489068 TRHP20396 242 aaPredicted RBP22.17■■□□□ 1.14
PABPC1L-215ENST00000489068 POLA1P09884 1462 aaPredicted RBP22.12■■□□□ 1.13
PABPC1L-215ENST00000489068 FBLN2P98095 1184 aa22.12■■□□□ 1.13
PABPC1L-215ENST00000489068 WDR97A6NE52 1622 aa22.1■■□□□ 1.13
PABPC1L-215ENST00000489068 SYNJ1O43426 1573 aa22.05■■□□□ 1.12
PABPC1L-215ENST00000489068 CLASP1Q7Z460 1538 aa22.03■■□□□ 1.12
PABPC1L-215ENST00000489068 SNAPC4Q5SXM2 1469 aa22.01■■□□□ 1.11
PABPC1L-215ENST00000489068 RAD54L2Q9Y4B4 1467 aa22.01■■□□□ 1.11
PABPC1L-215ENST00000489068 PBRM1Q86U86 1689 aa21.98■■□□□ 1.11
PABPC1L-215ENST00000489068 SOGA1O94964 1423 aa21.97■■□□□ 1.11
PABPC1L-215ENST00000489068 MAGI1Q96QZ7 1491 aaPredicted RBP21.96■■□□□ 1.11
PABPC1L-215ENST00000489068 TDRD9Q8NDG6 1382 aaKnown RBP21.95■■□□□ 1.1
PABPC1L-215ENST00000489068 FGD5Q6ZNL6 1462 aa21.95■■□□□ 1.1
PABPC1L-215ENST00000489068 CHMP7Q8WUX9 453 aaPredicted RBP21.88■■□□□ 1.09
PABPC1L-215ENST00000489068 GRIN2BQ13224 1484 aa21.88■■□□□ 1.09
PABPC1L-215ENST00000489068 AEBP2Q6ZN18 517 aaPredicted RBP21.87■■□□□ 1.09
PABPC1L-215ENST00000489068 SYNJ2O15056 1496 aa21.87■■□□□ 1.09
PABPC1L-215ENST00000489068 CUX1P39880 1505 aa21.85■■□□□ 1.09
PABPC1L-215ENST00000489068 GAPVD1Q14C86 1478 aa21.78■■□□□ 1.08
PABPC1L-215ENST00000489068 ABCA5Q8WWZ7 1642 aa21.76■■□□□ 1.07
PABPC1L-215ENST00000489068 ABCA10Q8WWZ4 1543 aa21.66■■□□□ 1.06
PABPC1L-215ENST00000489068 ADAMTS12P58397 1594 aa21.62■■□□□ 1.05
PABPC1L-215ENST00000489068 GRIN2AQ12879 1464 aa21.62■■□□□ 1.05
PABPC1L-215ENST00000489068 KIF13AQ9H1H9 1805 aa21.61■■□□□ 1.05
PABPC1L-215ENST00000489068 ERCC6L2Q5T890 1561 aa21.61■■□□□ 1.05
PABPC1L-215ENST00000489068 CEP170Q5SW79 1584 aa21.6■■□□□ 1.05
PABPC1L-215ENST00000489068 SHROOM2Q13796 1616 aa21.58■■□□□ 1.04
PABPC1L-215ENST00000489068 BIVM-ERCC5R4GMW8 1640 aa21.52■■□□□ 1.04
PABPC1L-215ENST00000489068 NUP160Q12769 1436 aa21.51■■□□□ 1.03
PABPC1L-215ENST00000489068 WRNQ14191 1432 aaPredicted RBP eCLIP21.48■■□□□ 1.03
PABPC1L-215ENST00000489068 TOP2BQ02880 1626 aa21.46■■□□□ 1.03
PABPC1L-215ENST00000489068 FHAD1B1AJZ9 1412 aa21.44■■□□□ 1.02
PABPC1L-215ENST00000489068 ERICH3Q5RHP9 1530 aa21.44■■□□□ 1.02
PABPC1L-215ENST00000489068 RUSC2Q8N2Y8 1516 aa21.34■■□□□ 1.01
PABPC1L-215ENST00000489068 PRG4Q92954 1404 aaPredicted RBP21.33■■□□□ 1.01
PABPC1L-215ENST00000489068 TSPOAP1O95153 1857 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms