RNA–Protein interactions for RNA: ENST00000488497.7

U2SURP-211, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 1 (best)

Gene U2SURP, Length 3,557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-211ENST00000488497 NISCHQ9Y2I1 1504 aa15.95■□□□□ 0.14
U2SURP-211ENST00000488497 ABCC9O60706 1549 aa14.53□□□□□ -0.08
U2SURP-211ENST00000488497 CCDC180Q9P1Z9 1646 aa14.43□□□□□ -0.1
U2SURP-211ENST00000488497 RB1CC1Q8TDY2 1594 aa13.87□□□□□ -0.19
U2SURP-211ENST00000488497 NACADO15069 1562 aa13.74□□□□□ -0.21
U2SURP-211ENST00000488497 DCAF8L2P0C7V8 631 aa13.65□□□□□ -0.23
U2SURP-211ENST00000488497 DNAJC5BQ9UF47 199 aa13.63□□□□□ -0.23
U2SURP-211ENST00000488497 MYO15BQ96JP2 1530 aa13.5□□□□□ -0.25
U2SURP-211ENST00000488497 PABPN1Q86U42 306 aaKnown RBP eCLIP13.5□□□□□ -0.25
U2SURP-211ENST00000488497 SHROOM4Q9ULL8 1493 aa13.37□□□□□ -0.27
U2SURP-211ENST00000488497 UNC13AQ9UPW8 1703 aa13.28□□□□□ -0.28
U2SURP-211ENST00000488497 BICRAQ9NZM4 1560 aa13.25□□□□□ -0.29
U2SURP-211ENST00000488497 DCAF1Q9Y4B6 1507 aa13.24□□□□□ -0.29
U2SURP-211ENST00000488497 CECR2Q9BXF3 1484 aa13.17□□□□□ -0.3
U2SURP-211ENST00000488497 ZCCHC6Q5VYS8 1495 aaKnown RBP13.17□□□□□ -0.3
U2SURP-211ENST00000488497 CC2D2AQ9P2K1 1620 aa13.1□□□□□ -0.31
U2SURP-211ENST00000488497 EIF4G1Q04637 1599 aaKnown RBP13.05□□□□□ -0.32
U2SURP-211ENST00000488497 SCRIBQ14160 1630 aa13.05□□□□□ -0.32
U2SURP-211ENST00000488497 DNAJC5Q9H3Z4 198 aa12.86□□□□□ -0.35
U2SURP-211ENST00000488497 CUX2O14529 1486 aa12.73□□□□□ -0.37
U2SURP-211ENST00000488497 ERCC6Q03468 1493 aa12.71□□□□□ -0.38
U2SURP-211ENST00000488497 NCAPD3P42695 1498 aa12.65□□□□□ -0.39
U2SURP-211ENST00000488497 SMARCA2P51531 1590 aa12.6□□□□□ -0.39
U2SURP-211ENST00000488497 HMGXB3Q12766 1538 aa12.54□□□□□ -0.4
U2SURP-211ENST00000488497 ATAD2BQ9ULI0 1458 aa12.54□□□□□ -0.4
U2SURP-211ENST00000488497 BAZ1BQ9UIG0 1483 aaKnown RBP12.48□□□□□ -0.41
U2SURP-211ENST00000488497 BAZ1AQ9NRL2 1556 aaPredicted RBP12.47□□□□□ -0.41
U2SURP-211ENST00000488497 SMARCA4P51532 1647 aa12.46□□□□□ -0.42
U2SURP-211ENST00000488497 PDS5BQ9NTI5 1447 aa12.43□□□□□ -0.42
U2SURP-211ENST00000488497 LAMC3Q9Y6N6 1575 aa12.41□□□□□ -0.42
U2SURP-211ENST00000488497 PEG3Q9GZU2 1588 aa12.35□□□□□ -0.43
U2SURP-211ENST00000488497 NESP48681 1621 aa12.35□□□□□ -0.43
U2SURP-211ENST00000488497 THOC2Q8NI27 1593 aaKnown RBP12.29□□□□□ -0.44
U2SURP-211ENST00000488497 CADPSQ9ULU8 1353 aa12.28□□□□□ -0.44
U2SURP-211ENST00000488497 MRC2Q9UBG0 1479 aa12.25□□□□□ -0.45
U2SURP-211ENST00000488497 TRIM41Q8WV44 630 aa12.24□□□□□ -0.45
U2SURP-211ENST00000488497 MROH2BQ7Z745 1585 aa12.2□□□□□ -0.46
U2SURP-211ENST00000488497 CEP164Q9UPV0 1460 aa12.18□□□□□ -0.46
U2SURP-211ENST00000488497 KIF21AQ7Z4S6 1674 aa12.18□□□□□ -0.46
U2SURP-211ENST00000488497 WDR62O43379 1518 aa12.16□□□□□ -0.46
U2SURP-211ENST00000488497 OSCARQ8IYS5 282 aa12.16□□□□□ -0.46
U2SURP-211ENST00000488497 FANCD2Q9BXW9 1451 aa12.11□□□□□ -0.47
U2SURP-211ENST00000488497 CFTRP13569 1480 aa12.05□□□□□ -0.48
U2SURP-211ENST00000488497 WIZO95785 1651 aa12.02□□□□□ -0.48
U2SURP-211ENST00000488497 TOP2AP11388 1531 aaKnown RBP11.99□□□□□ -0.49
U2SURP-211ENST00000488497 ABCC8Q09428 1581 aa11.98□□□□□ -0.49
U2SURP-211ENST00000488497 IFT140Q96RY7 1462 aa11.96□□□□□ -0.49
U2SURP-211ENST00000488497 RSF1Q96T23 1441 aaPredicted RBP11.95□□□□□ -0.5
U2SURP-211ENST00000488497 URB2Q14146 1524 aaKnown RBP11.92□□□□□ -0.5
U2SURP-211ENST00000488497 PRDM2Q13029 1718 aa11.86□□□□□ -0.51
U2SURP-211ENST00000488497 RIMBP3CA6NJZ7 1639 aa11.83□□□□□ -0.52
U2SURP-211ENST00000488497 RIMBP3BA6NNM3 1639 aa11.83□□□□□ -0.52
U2SURP-211ENST00000488497 RIMBP3Q9UFD9 1639 aa11.83□□□□□ -0.52
U2SURP-211ENST00000488497 TOPBP1Q92547 1522 aa11.83□□□□□ -0.52
U2SURP-211ENST00000488497 TRHP20396 242 aaPredicted RBP11.82□□□□□ -0.52
U2SURP-211ENST00000488497 ARHGEF11O15085 1522 aa11.82□□□□□ -0.52
U2SURP-211ENST00000488497 CCDC88BA6NC98 1476 aa11.81□□□□□ -0.52
U2SURP-211ENST00000488497 FBLN2P98095 1184 aa11.8□□□□□ -0.52
U2SURP-211ENST00000488497 CYB5RLQ6IPT4 315 aa11.8□□□□□ -0.52
U2SURP-211ENST00000488497 DNMBPQ6XZF7 1577 aa11.8□□□□□ -0.52
U2SURP-211ENST00000488497 ZNF608Q9ULD9 1512 aaPredicted RBP11.78□□□□□ -0.52
U2SURP-211ENST00000488497 EIF4G3O43432 1585 aaKnown RBP11.75□□□□□ -0.53
U2SURP-211ENST00000488497 WDR97A6NE52 1622 aa11.73□□□□□ -0.53
U2SURP-211ENST00000488497 CHMP7Q8WUX9 453 aaPredicted RBP11.73□□□□□ -0.53
U2SURP-211ENST00000488497 SOGA1O94964 1423 aa11.71□□□□□ -0.54
U2SURP-211ENST00000488497 AQRO60306 1485 aaKnown RBP eCLIP11.71□□□□□ -0.545e-7■■■■□ 21.2
U2SURP-211ENST00000488497 AEBP2Q6ZN18 517 aaPredicted RBP11.71□□□□□ -0.54
U2SURP-211ENST00000488497 SYNJ1O43426 1573 aa11.68□□□□□ -0.54
U2SURP-211ENST00000488497 POLA1P09884 1462 aaPredicted RBP11.68□□□□□ -0.54
U2SURP-211ENST00000488497 MAGI1Q96QZ7 1491 aaPredicted RBP11.67□□□□□ -0.54
U2SURP-211ENST00000488497 TARBP1Q13395 1621 aaKnown RBP11.66□□□□□ -0.54
U2SURP-211ENST00000488497 CHD1O14646 1710 aa11.66□□□□□ -0.54
U2SURP-211ENST00000488497 ARAP1Q96P48 1450 aa11.66□□□□□ -0.54
U2SURP-211ENST00000488497 GRIN2BQ13224 1484 aa11.64□□□□□ -0.55
U2SURP-211ENST00000488497 TDRD9Q8NDG6 1382 aaKnown RBP11.63□□□□□ -0.55
U2SURP-211ENST00000488497 SNAPC4Q5SXM2 1469 aa11.62□□□□□ -0.55
U2SURP-211ENST00000488497 SYNJ2O15056 1496 aa11.61□□□□□ -0.55
U2SURP-211ENST00000488497 FGD5Q6ZNL6 1462 aa11.59□□□□□ -0.55
U2SURP-211ENST00000488497 RAD54L2Q9Y4B4 1467 aa11.59□□□□□ -0.55
U2SURP-211ENST00000488497 CLASP1Q7Z460 1538 aa11.56□□□□□ -0.56
U2SURP-211ENST00000488497 GAPVD1Q14C86 1478 aa11.55□□□□□ -0.56
U2SURP-211ENST00000488497 CUX1P39880 1505 aa11.5□□□□□ -0.57
U2SURP-211ENST00000488497 WRNQ14191 1432 aaPredicted RBP eCLIP11.49□□□□□ -0.57
U2SURP-211ENST00000488497 ABCA10Q8WWZ4 1543 aa11.49□□□□□ -0.57
U2SURP-211ENST00000488497 NPM1P06748 294 aaKnown RBP eCLIP11.48□□□□□ -0.57
U2SURP-211ENST00000488497 PBRM1Q86U86 1689 aa11.45□□□□□ -0.58
U2SURP-211ENST00000488497 GRIN2AQ12879 1464 aa11.44□□□□□ -0.58
U2SURP-211ENST00000488497 FHAD1B1AJZ9 1412 aa11.44□□□□□ -0.58
U2SURP-211ENST00000488497 ABCA5Q8WWZ7 1642 aa11.41□□□□□ -0.58
U2SURP-211ENST00000488497 NUP160Q12769 1436 aa11.4□□□□□ -0.58
U2SURP-211ENST00000488497 ERICH3Q5RHP9 1530 aa11.38□□□□□ -0.59
U2SURP-211ENST00000488497 ADAMTS12P58397 1594 aa11.37□□□□□ -0.59
U2SURP-211ENST00000488497 CEP170Q5SW79 1584 aa11.36□□□□□ -0.59
U2SURP-211ENST00000488497 SUPT5HO00267 1087 aaKnown RBP11.36□□□□□ -0.59
U2SURP-211ENST00000488497 JPH4Q96JJ6 628 aa11.34□□□□□ -0.59
U2SURP-211ENST00000488497 PRG4Q92954 1404 aaPredicted RBP11.33□□□□□ -0.59
U2SURP-211ENST00000488497 TOP2BQ02880 1626 aa11.32□□□□□ -0.6
U2SURP-211ENST00000488497 FAM69CQ0P6D2 419 aa11.31□□□□□ -0.6
U2SURP-211ENST00000488497 SHROOM2Q13796 1616 aa11.31□□□□□ -0.6
U2SURP-211ENST00000488497 BIVM-ERCC5R4GMW8 1640 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms