RNA–Protein interactions for RNA: ENST00000488477.2

KCNE4-202, Transcript of potassium voltage-gated channel subfamily E regulatory subunit 4, humanhuman

TSL 3

Gene KCNE4, Length 908 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNE4-202ENST00000488477 NISCHQ9Y2I1 1504 aa36.6■■■■□ 3.45
KCNE4-202ENST00000488477 AEBP2Q6ZN18 517 aaPredicted RBP34.37■■■■□ 3.09
KCNE4-202ENST00000488477 CCDC180Q9P1Z9 1646 aa32.69■■■□□ 2.82
KCNE4-202ENST00000488477 CHIC1Q5VXU3 224 aa32.45■■■□□ 2.79
KCNE4-202ENST00000488477 ABCC9O60706 1549 aa32.43■■■□□ 2.78
KCNE4-202ENST00000488477 RB1CC1Q8TDY2 1594 aa30.98■■■□□ 2.55
KCNE4-202ENST00000488477 NACADO15069 1562 aa30.85■■■□□ 2.53
KCNE4-202ENST00000488477 DCAF8L2P0C7V8 631 aa30.75■■■□□ 2.51
KCNE4-202ENST00000488477 MYO15BQ96JP2 1530 aa30.52■■■□□ 2.48
KCNE4-202ENST00000488477 ZCCHC6Q5VYS8 1495 aaKnown RBP30.39■■■□□ 2.46
KCNE4-202ENST00000488477 UNC13AQ9UPW8 1703 aa30.3■■■□□ 2.44
KCNE4-202ENST00000488477 PABPN1Q86U42 306 aaKnown RBP eCLIP30.25■■■□□ 2.43
KCNE4-202ENST00000488477 DCAF1Q9Y4B6 1507 aa30.25■■■□□ 2.43
KCNE4-202ENST00000488477 DNAJC5BQ9UF47 199 aa30.19■■■□□ 2.42
KCNE4-202ENST00000488477 BICRAQ9NZM4 1560 aa30.11■■■□□ 2.41
KCNE4-202ENST00000488477 SCRIBQ14160 1630 aa29.82■■■□□ 2.36
KCNE4-202ENST00000488477 SHROOM4Q9ULL8 1493 aa29.68■■■□□ 2.34
KCNE4-202ENST00000488477 EIF4G1Q04637 1599 aaKnown RBP29.32■■■□□ 2.28
KCNE4-202ENST00000488477 CC2D2AQ9P2K1 1620 aa29.31■■■□□ 2.28
KCNE4-202ENST00000488477 SENP3Q9H4L4 574 aaPredicted RBP29.29■■■□□ 2.28
KCNE4-202ENST00000488477 CECR2Q9BXF3 1484 aa29.17■■■□□ 2.26
KCNE4-202ENST00000488477 PHF23Q9BUL5 403 aaPredicted RBP28.92■■■□□ 2.22
KCNE4-202ENST00000488477 NCAPD3P42695 1498 aa28.49■■■□□ 2.15
KCNE4-202ENST00000488477 SMARCA4P51532 1647 aa28.48■■■□□ 2.15
KCNE4-202ENST00000488477 ATAD2BQ9ULI0 1458 aa28.45■■■□□ 2.14
KCNE4-202ENST00000488477 BAZ1AQ9NRL2 1556 aaPredicted RBP28.37■■■□□ 2.13
KCNE4-202ENST00000488477 SMARCA2P51531 1590 aa28.36■■■□□ 2.13
KCNE4-202ENST00000488477 HMGXB3Q12766 1538 aa28.29■■■□□ 2.12
KCNE4-202ENST00000488477 MROH2BQ7Z745 1585 aa28.22■■■□□ 2.11
KCNE4-202ENST00000488477 PEG3Q9GZU2 1588 aa28.2■■■□□ 2.11
KCNE4-202ENST00000488477 BAZ1BQ9UIG0 1483 aaKnown RBP28.17■■■□□ 2.1
KCNE4-202ENST00000488477 NESP48681 1621 aa27.96■■■□□ 2.07
KCNE4-202ENST00000488477 ERCC6Q03468 1493 aa27.95■■■□□ 2.06
KCNE4-202ENST00000488477 WIZO95785 1651 aa27.89■■■□□ 2.06
KCNE4-202ENST00000488477 CUX2O14529 1486 aa27.81■■■□□ 2.04
KCNE4-202ENST00000488477 LAMC3Q9Y6N6 1575 aa27.78■■■□□ 2.04
KCNE4-202ENST00000488477 RSF1Q96T23 1441 aaPredicted RBP27.74■■■□□ 2.03
KCNE4-202ENST00000488477 CADPSQ9ULU8 1353 aa27.63■■■□□ 2.01
KCNE4-202ENST00000488477 PDS5BQ9NTI5 1447 aa27.6■■■□□ 2.01
KCNE4-202ENST00000488477 THOC2Q8NI27 1593 aaKnown RBP27.6■■■□□ 2.01
KCNE4-202ENST00000488477 KIF21AQ7Z4S6 1674 aa27.59■■■□□ 2.01
KCNE4-202ENST00000488477 TOP2AP11388 1531 aaKnown RBP27.54■■■□□ 2
KCNE4-202ENST00000488477 DNAJC5Q9H3Z4 198 aa27.52■■■□□ 2
KCNE4-202ENST00000488477 CFTRP13569 1480 aa27.38■■□□□ 1.97
KCNE4-202ENST00000488477 FOXD1Q16676 465 aa27.37■■□□□ 1.97
KCNE4-202ENST00000488477 MRC2Q9UBG0 1479 aa27.36■■□□□ 1.97
KCNE4-202ENST00000488477 FANCD2Q9BXW9 1451 aa27.32■■□□□ 1.96
KCNE4-202ENST00000488477 CEP164Q9UPV0 1460 aa27.31■■□□□ 1.96
KCNE4-202ENST00000488477 WDR62O43379 1518 aa27.29■■□□□ 1.96
KCNE4-202ENST00000488477 CCDC88BA6NC98 1476 aa27.25■■□□□ 1.95
KCNE4-202ENST00000488477 PRDM2Q13029 1718 aa27.11■■□□□ 1.93
KCNE4-202ENST00000488477 URB2Q14146 1524 aaKnown RBP27.09■■□□□ 1.93
KCNE4-202ENST00000488477 TOPBP1Q92547 1522 aa26.84■■□□□ 1.89
KCNE4-202ENST00000488477 ABCC8Q09428 1581 aa26.78■■□□□ 1.88
KCNE4-202ENST00000488477 DNMBPQ6XZF7 1577 aa26.75■■□□□ 1.87
KCNE4-202ENST00000488477 IFT140Q96RY7 1462 aa26.75■■□□□ 1.87
KCNE4-202ENST00000488477 SUPT5HO00267 1087 aaKnown RBP26.72■■□□□ 1.87
KCNE4-202ENST00000488477 ZNF608Q9ULD9 1512 aaPredicted RBP26.7■■□□□ 1.87
KCNE4-202ENST00000488477 TARBP1Q13395 1621 aaKnown RBP26.59■■□□□ 1.85
KCNE4-202ENST00000488477 OSCARQ8IYS5 282 aa26.59■■□□□ 1.85
KCNE4-202ENST00000488477 POLA1P09884 1462 aaPredicted RBP26.58■■□□□ 1.85
KCNE4-202ENST00000488477 EIF4G3O43432 1585 aaKnown RBP26.55■■□□□ 1.84
KCNE4-202ENST00000488477 AQRO60306 1485 aaKnown RBP eCLIP26.5■■□□□ 1.83
KCNE4-202ENST00000488477 CUX1P39880 1505 aa26.49■■□□□ 1.83
KCNE4-202ENST00000488477 RAD54L2Q9Y4B4 1467 aa26.49■■□□□ 1.83
KCNE4-202ENST00000488477 SOGA1O94964 1423 aa26.47■■□□□ 1.83
KCNE4-202ENST00000488477 FGD5Q6ZNL6 1462 aa26.46■■□□□ 1.83
KCNE4-202ENST00000488477 TRIM41Q8WV44 630 aa26.43■■□□□ 1.82
KCNE4-202ENST00000488477 TDRD9Q8NDG6 1382 aaKnown RBP26.38■■□□□ 1.81
KCNE4-202ENST00000488477 CHD1O14646 1710 aa26.31■■□□□ 1.8
KCNE4-202ENST00000488477 WDR97A6NE52 1622 aa26.3■■□□□ 1.8
KCNE4-202ENST00000488477 FBLN2P98095 1184 aa26.24■■□□□ 1.79
KCNE4-202ENST00000488477 SNAPC4Q5SXM2 1469 aa26.23■■□□□ 1.79
KCNE4-202ENST00000488477 RIMBP3CA6NJZ7 1639 aa26.22■■□□□ 1.79
KCNE4-202ENST00000488477 RIMBP3BA6NNM3 1639 aa26.22■■□□□ 1.79
KCNE4-202ENST00000488477 RIMBP3Q9UFD9 1639 aa26.22■■□□□ 1.79
KCNE4-202ENST00000488477 GRIN2BQ13224 1484 aa26.19■■□□□ 1.78
KCNE4-202ENST00000488477 ABCA10Q8WWZ4 1543 aa26.18■■□□□ 1.78
KCNE4-202ENST00000488477 ARHGEF11O15085 1522 aa26.17■■□□□ 1.78
KCNE4-202ENST00000488477 MAGI1Q96QZ7 1491 aaPredicted RBP26.16■■□□□ 1.78
KCNE4-202ENST00000488477 GAPVD1Q14C86 1478 aa26.15■■□□□ 1.78
KCNE4-202ENST00000488477 WRNQ14191 1432 aaPredicted RBP eCLIP26.14■■□□□ 1.78
KCNE4-202ENST00000488477 TOP2BQ02880 1626 aa26.14■■□□□ 1.77
KCNE4-202ENST00000488477 BIVM-ERCC5R4GMW8 1640 aa26.14■■□□□ 1.77
KCNE4-202ENST00000488477 SYNJ1O43426 1573 aa26.12■■□□□ 1.77
KCNE4-202ENST00000488477 ABCA5Q8WWZ7 1642 aa26.11■■□□□ 1.77
KCNE4-202ENST00000488477 PBRM1Q86U86 1689 aa26.11■■□□□ 1.77
KCNE4-202ENST00000488477 CHMP7Q8WUX9 453 aaPredicted RBP26.09■■□□□ 1.77
KCNE4-202ENST00000488477 SYNJ2O15056 1496 aa26.06■■□□□ 1.76
KCNE4-202ENST00000488477 CLASP1Q7Z460 1538 aa26.02■■□□□ 1.76
KCNE4-202ENST00000488477 CYB5RLQ6IPT4 315 aa25.96■■□□□ 1.75
KCNE4-202ENST00000488477 ARAP1Q96P48 1450 aa25.94■■□□□ 1.74
KCNE4-202ENST00000488477 ADAMTS12P58397 1594 aa25.89■■□□□ 1.73
KCNE4-202ENST00000488477 GRIN2AQ12879 1464 aa25.86■■□□□ 1.73
KCNE4-202ENST00000488477 ERICH3Q5RHP9 1530 aa25.84■■□□□ 1.73
KCNE4-202ENST00000488477 PLPPR3Q6T4P5 718 aa25.84■■□□□ 1.73
KCNE4-202ENST00000488477 FHAD1B1AJZ9 1412 aa25.82■■□□□ 1.72
KCNE4-202ENST00000488477 NUP160Q12769 1436 aa25.78■■□□□ 1.72
KCNE4-202ENST00000488477 CEP170Q5SW79 1584 aa25.76■■□□□ 1.71
KCNE4-202ENST00000488477 ERCC6L2Q5T890 1561 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms