RNA–Protein interactions for RNA: ENST00000488408.1

RPL21P42-201, Transcript of ribosomal protein L21 pseudogene 42, humanhuman

BASIC

Gene RPL21P42, Length 464 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL21P42-201ENST00000488408 AEBP2Q6ZN18 517 aaPredicted RBP19.47■□□□□ 0.71
RPL21P42-201ENST00000488408 NISCHQ9Y2I1 1504 aa17.97■□□□□ 0.47
RPL21P42-201ENST00000488408 CHIC1Q5VXU3 224 aa17.96■□□□□ 0.47
RPL21P42-201ENST00000488408 SENP3Q9H4L4 574 aaPredicted RBP16.51■□□□□ 0.23
RPL21P42-201ENST00000488408 PHF23Q9BUL5 403 aaPredicted RBP16.26■□□□□ 0.19
RPL21P42-201ENST00000488408 CCDC180Q9P1Z9 1646 aa16.16■□□□□ 0.18
RPL21P42-201ENST00000488408 ABCC9O60706 1549 aa16.16■□□□□ 0.18
RPL21P42-201ENST00000488408 FOXD1Q16676 465 aa15.58■□□□□ 0.08
RPL21P42-201ENST00000488408 POTEDQ86YR6 584 aa15.55■□□□□ 0.08
RPL21P42-201ENST00000488408 RB1CC1Q8TDY2 1594 aa15.41■□□□□ 0.06
RPL21P42-201ENST00000488408 NACADO15069 1562 aa15.3■□□□□ 0.04
RPL21P42-201ENST00000488408 DNAJC5BQ9UF47 199 aa15.17■□□□□ 0.02
RPL21P42-201ENST00000488408 DCAF8L2P0C7V8 631 aa15.13■□□□□ 0.01
RPL21P42-201ENST00000488408 MYO15BQ96JP2 1530 aa15.11■□□□□ 0.01
RPL21P42-201ENST00000488408 PABPN1Q86U42 306 aaKnown RBP eCLIP15.02■□□□□ -0
RPL21P42-201ENST00000488408 UNC13AQ9UPW8 1703 aa14.98□□□□□ -0.01
RPL21P42-201ENST00000488408 BICRAQ9NZM4 1560 aa14.92□□□□□ -0.02
RPL21P42-201ENST00000488408 ZCCHC6Q5VYS8 1495 aaKnown RBP14.89□□□□□ -0.03
RPL21P42-201ENST00000488408 DCAF1Q9Y4B6 1507 aa14.88□□□□□ -0.03
RPL21P42-201ENST00000488408 SHROOM4Q9ULL8 1493 aa14.82□□□□□ -0.04
RPL21P42-201ENST00000488408 SCRIBQ14160 1630 aa14.67□□□□□ -0.06
RPL21P42-201ENST00000488408 MSH5O43196 834 aa14.67□□□□□ -0.06
RPL21P42-201ENST00000488408 CC2D2AQ9P2K1 1620 aa14.61□□□□□ -0.07
RPL21P42-201ENST00000488408 CECR2Q9BXF3 1484 aa14.59□□□□□ -0.07
RPL21P42-201ENST00000488408 EIF4G1Q04637 1599 aaKnown RBP14.58□□□□□ -0.08
RPL21P42-201ENST00000488408 PIAS4Q8N2W9 510 aaPredicted RBP14.38□□□□□ -0.11
RPL21P42-201ENST00000488408 PPP6R1Q9UPN7 881 aa14.14□□□□□ -0.15
RPL21P42-201ENST00000488408 NCAPD3P42695 1498 aa14.12□□□□□ -0.15
RPL21P42-201ENST00000488408 ATAD2BQ9ULI0 1458 aa14.06□□□□□ -0.16
RPL21P42-201ENST00000488408 ADRA2BP18089 450 aa14.04□□□□□ -0.16
RPL21P42-201ENST00000488408 SMARCA2P51531 1590 aa14.04□□□□□ -0.16
RPL21P42-201ENST00000488408 DNAJC5Q9H3Z4 198 aa14.03□□□□□ -0.16
RPL21P42-201ENST00000488408 HMGXB3Q12766 1538 aa14.02□□□□□ -0.16
RPL21P42-201ENST00000488408 CUX2O14529 1486 aa14.02□□□□□ -0.16
RPL21P42-201ENST00000488408 SMARCA4P51532 1647 aa14.01□□□□□ -0.17
RPL21P42-201ENST00000488408 ERCC6Q03468 1493 aa13.99□□□□□ -0.17
RPL21P42-201ENST00000488408 BAZ1AQ9NRL2 1556 aaPredicted RBP13.97□□□□□ -0.17
RPL21P42-201ENST00000488408 BAZ1BQ9UIG0 1483 aaKnown RBP13.92□□□□□ -0.18
RPL21P42-201ENST00000488408 PEG3Q9GZU2 1588 aa13.91□□□□□ -0.18
RPL21P42-201ENST00000488408 NESP48681 1621 aa13.86□□□□□ -0.19
RPL21P42-201ENST00000488408 MROH2BQ7Z745 1585 aa13.81□□□□□ -0.2
RPL21P42-201ENST00000488408 LAMC3Q9Y6N6 1575 aa13.81□□□□□ -0.2
RPL21P42-201ENST00000488408 PLPPR3Q6T4P5 718 aa13.81□□□□□ -0.2
RPL21P42-201ENST00000488408 THOC2Q8NI27 1593 aaKnown RBP13.75□□□□□ -0.21
RPL21P42-201ENST00000488408 PDS5BQ9NTI5 1447 aa13.75□□□□□ -0.21
RPL21P42-201ENST00000488408 CADPSQ9ULU8 1353 aa13.69□□□□□ -0.22
RPL21P42-201ENST00000488408 KIF21AQ7Z4S6 1674 aa13.67□□□□□ -0.22
RPL21P42-201ENST00000488408 WIZO95785 1651 aa13.63□□□□□ -0.23
RPL21P42-201ENST00000488408 MRC2Q9UBG0 1479 aa13.61□□□□□ -0.23
RPL21P42-201ENST00000488408 WDR62O43379 1518 aa13.58□□□□□ -0.24
RPL21P42-201ENST00000488408 CEP164Q9UPV0 1460 aa13.55□□□□□ -0.24
RPL21P42-201ENST00000488408 RSF1Q96T23 1441 aaPredicted RBP13.53□□□□□ -0.24
RPL21P42-201ENST00000488408 CFTRP13569 1480 aa13.52□□□□□ -0.25
RPL21P42-201ENST00000488408 FANCD2Q9BXW9 1451 aa13.52□□□□□ -0.25
RPL21P42-201ENST00000488408 TOP2AP11388 1531 aaKnown RBP13.5□□□□□ -0.25
RPL21P42-201ENST00000488408 URB2Q14146 1524 aaKnown RBP13.39□□□□□ -0.27
RPL21P42-201ENST00000488408 TRIM41Q8WV44 630 aa13.36□□□□□ -0.27
RPL21P42-201ENST00000488408 PRDM2Q13029 1718 aa13.36□□□□□ -0.27
RPL21P42-201ENST00000488408 OSCARQ8IYS5 282 aa13.35□□□□□ -0.27
RPL21P42-201ENST00000488408 CCDC88BA6NC98 1476 aa13.33□□□□□ -0.28
RPL21P42-201ENST00000488408 IFT140Q96RY7 1462 aa13.29□□□□□ -0.28
RPL21P42-201ENST00000488408 ABCC8Q09428 1581 aa13.27□□□□□ -0.29
RPL21P42-201ENST00000488408 TOPBP1Q92547 1522 aa13.25□□□□□ -0.29
RPL21P42-201ENST00000488408 ZNF608Q9ULD9 1512 aaPredicted RBP13.22□□□□□ -0.29
RPL21P42-201ENST00000488408 DNMBPQ6XZF7 1577 aa13.21□□□□□ -0.29
RPL21P42-201ENST00000488408 EIF4G3O43432 1585 aaKnown RBP13.16□□□□□ -0.3
RPL21P42-201ENST00000488408 RIMBP3CA6NJZ7 1639 aa13.14□□□□□ -0.31
RPL21P42-201ENST00000488408 RIMBP3BA6NNM3 1639 aa13.14□□□□□ -0.31
RPL21P42-201ENST00000488408 RIMBP3Q9UFD9 1639 aa13.14□□□□□ -0.31
RPL21P42-201ENST00000488408 TARBP1Q13395 1621 aaKnown RBP13.13□□□□□ -0.31
RPL21P42-201ENST00000488408 ARHGEF11O15085 1522 aa13.12□□□□□ -0.31
RPL21P42-201ENST00000488408 POLA1P09884 1462 aaPredicted RBP13.11□□□□□ -0.31
RPL21P42-201ENST00000488408 MAPK8IP2Q13387 824 aaPredicted RBP13.11□□□□□ -0.31
RPL21P42-201ENST00000488408 AQRO60306 1485 aaKnown RBP eCLIP13.1□□□□□ -0.31
RPL21P42-201ENST00000488408 WDR97A6NE52 1622 aa13.06□□□□□ -0.32
RPL21P42-201ENST00000488408 SOGA1O94964 1423 aa13.05□□□□□ -0.32
RPL21P42-201ENST00000488408 CHD1O14646 1710 aa13.05□□□□□ -0.32
RPL21P42-201ENST00000488408 DMRT2Q9Y5R5 561 aa13.04□□□□□ -0.32
RPL21P42-201ENST00000488408 RAD54L2Q9Y4B4 1467 aa13.04□□□□□ -0.32
RPL21P42-201ENST00000488408 CACNB1Q02641 598 aaPredicted RBP13.03□□□□□ -0.32
RPL21P42-201ENST00000488408 FBLN2P98095 1184 aa13.02□□□□□ -0.33
RPL21P42-201ENST00000488408 FGD5Q6ZNL6 1462 aa13.02□□□□□ -0.33
RPL21P42-201ENST00000488408 TDRD9Q8NDG6 1382 aaKnown RBP13.01□□□□□ -0.33
RPL21P42-201ENST00000488408 CYB5RLQ6IPT4 315 aa13□□□□□ -0.33
RPL21P42-201ENST00000488408 CUX1P39880 1505 aa12.99□□□□□ -0.33
RPL21P42-201ENST00000488408 SNAPC4Q5SXM2 1469 aa12.98□□□□□ -0.33
RPL21P42-201ENST00000488408 MAGI1Q96QZ7 1491 aaPredicted RBP12.98□□□□□ -0.33
RPL21P42-201ENST00000488408 ARAP1Q96P48 1450 aa12.97□□□□□ -0.33
RPL21P42-201ENST00000488408 GRIN2BQ13224 1484 aa12.97□□□□□ -0.33
RPL21P42-201ENST00000488408 CHMP7Q8WUX9 453 aaPredicted RBP12.95□□□□□ -0.34
RPL21P42-201ENST00000488408 SYNJ1O43426 1573 aa12.94□□□□□ -0.34
RPL21P42-201ENST00000488408 CLASP1Q7Z460 1538 aa12.94□□□□□ -0.34
RPL21P42-201ENST00000488408 SYNJ2O15056 1496 aa12.93□□□□□ -0.34
RPL21P42-201ENST00000488408 GAPVD1Q14C86 1478 aa12.9□□□□□ -0.34
RPL21P42-201ENST00000488408 ABCA10Q8WWZ4 1543 aa12.89□□□□□ -0.35
RPL21P42-201ENST00000488408 TRHP20396 242 aaPredicted RBP12.88□□□□□ -0.35
RPL21P42-201ENST00000488408 PBRM1Q86U86 1689 aa12.87□□□□□ -0.35
RPL21P42-201ENST00000488408 ABCA5Q8WWZ7 1642 aa12.85□□□□□ -0.35
RPL21P42-201ENST00000488408 SUPT5HO00267 1087 aaKnown RBP12.85□□□□□ -0.35
RPL21P42-201ENST00000488408 WRNQ14191 1432 aaPredicted RBP eCLIP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms