RNA–Protein interactions for RNA: ENST00000488299.5

IDH3B-209, Transcript of isocitrate dehydrogenase 3 (NAD(+)) beta, humanhuman

TSL 2

Gene IDH3B, Length 1,620 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3B-209ENST00000488299 NISCHQ9Y2I1 1504 aa39.96■■■■□ 3.99
IDH3B-209ENST00000488299 CCDC180Q9P1Z9 1646 aa35.36■■■■□ 3.25
IDH3B-209ENST00000488299 ABCC9O60706 1549 aa34.41■■■■□ 3.1
IDH3B-209ENST00000488299 ZCCHC6Q5VYS8 1495 aaKnown RBP33.34■■■□□ 2.93
IDH3B-209ENST00000488299 DCAF8L2P0C7V8 631 aa33.31■■■□□ 2.92
IDH3B-209ENST00000488299 NACADO15069 1562 aa33.18■■■□□ 2.9
IDH3B-209ENST00000488299 RB1CC1Q8TDY2 1594 aa33.16■■■□□ 2.9
IDH3B-209ENST00000488299 MYO15BQ96JP2 1530 aa33.05■■■□□ 2.88
IDH3B-209ENST00000488299 DCAF1Q9Y4B6 1507 aa33.03■■■□□ 2.88
IDH3B-209ENST00000488299 UNC13AQ9UPW8 1703 aa32.46■■■□□ 2.79
IDH3B-209ENST00000488299 SCRIBQ14160 1630 aa32.36■■■□□ 2.77
IDH3B-209ENST00000488299 PABPN1Q86U42 306 aaKnown RBP eCLIP32.22■■■□□ 2.75
IDH3B-209ENST00000488299 BICRAQ9NZM4 1560 aa32.2■■■□□ 2.74
IDH3B-209ENST00000488299 SHROOM4Q9ULL8 1493 aa32.15■■■□□ 2.74
IDH3B-209ENST00000488299 DNAJC5BQ9UF47 199 aa31.36■■■□□ 2.61
IDH3B-209ENST00000488299 EIF4G1Q04637 1599 aaKnown RBP31.31■■■□□ 2.6
IDH3B-209ENST00000488299 CECR2Q9BXF3 1484 aa31.14■■■□□ 2.58
IDH3B-209ENST00000488299 CC2D2AQ9P2K1 1620 aa31.12■■■□□ 2.57
IDH3B-209ENST00000488299 SMARCA4P51532 1647 aa30.95■■■□□ 2.54
IDH3B-209ENST00000488299 BAZ1AQ9NRL2 1556 aaPredicted RBP30.93■■■□□ 2.54
IDH3B-209ENST00000488299 SUPT5HO00267 1087 aaKnown RBP30.84■■■□□ 2.53
IDH3B-209ENST00000488299 MROH2BQ7Z745 1585 aa30.83■■■□□ 2.53
IDH3B-209ENST00000488299 ATAD2BQ9ULI0 1458 aa30.72■■■□□ 2.51
IDH3B-209ENST00000488299 RSF1Q96T23 1441 aaPredicted RBP30.66■■■□□ 2.5
IDH3B-209ENST00000488299 SMARCA2P51531 1590 aa30.65■■■□□ 2.5
IDH3B-209ENST00000488299 NCAPD3P42695 1498 aa30.63■■■□□ 2.49
IDH3B-209ENST00000488299 PEG3Q9GZU2 1588 aa30.61■■■□□ 2.49
IDH3B-209ENST00000488299 WIZO95785 1651 aa30.53■■■□□ 2.48
IDH3B-209ENST00000488299 HMGXB3Q12766 1538 aa30.5■■■□□ 2.47
IDH3B-209ENST00000488299 BAZ1BQ9UIG0 1483 aaKnown RBP30.46■■■□□ 2.47
IDH3B-209ENST00000488299 TOP2AP11388 1531 aaKnown RBP30.17■■■□□ 2.42
IDH3B-209ENST00000488299 NESP48681 1621 aa29.88■■■□□ 2.37
IDH3B-209ENST00000488299 CCDC88BA6NC98 1476 aa29.85■■■□□ 2.37
IDH3B-209ENST00000488299 LAMC3Q9Y6N6 1575 aa29.77■■■□□ 2.36
IDH3B-209ENST00000488299 CADPSQ9ULU8 1353 aa29.76■■■□□ 2.35
IDH3B-209ENST00000488299 CFTRP13569 1480 aa29.64■■■□□ 2.34
IDH3B-209ENST00000488299 ERCC6Q03468 1493 aa29.59■■■□□ 2.33
IDH3B-209ENST00000488299 PDS5BQ9NTI5 1447 aa29.56■■■□□ 2.32
IDH3B-209ENST00000488299 KIF21AQ7Z4S6 1674 aa29.51■■■□□ 2.31
IDH3B-209ENST00000488299 PRDM2Q13029 1718 aa29.43■■■□□ 2.3
IDH3B-209ENST00000488299 FANCD2Q9BXW9 1451 aa29.43■■■□□ 2.3
IDH3B-209ENST00000488299 CEP164Q9UPV0 1460 aa29.35■■■□□ 2.29
IDH3B-209ENST00000488299 CHIC1Q5VXU3 224 aa29.35■■■□□ 2.29
IDH3B-209ENST00000488299 THOC2Q8NI27 1593 aaKnown RBP29.33■■■□□ 2.29
IDH3B-209ENST00000488299 MRC2Q9UBG0 1479 aa29.25■■■□□ 2.27
IDH3B-209ENST00000488299 CUX2O14529 1486 aa29.15■■■□□ 2.26
IDH3B-209ENST00000488299 WDR62O43379 1518 aa29.15■■■□□ 2.26
IDH3B-209ENST00000488299 URB2Q14146 1524 aaKnown RBP29.14■■■□□ 2.26
IDH3B-209ENST00000488299 TRIM41Q8WV44 630 aa29.06■■■□□ 2.24
IDH3B-209ENST00000488299 TOPBP1Q92547 1522 aa28.99■■■□□ 2.23
IDH3B-209ENST00000488299 DNMBPQ6XZF7 1577 aa28.98■■■□□ 2.23
IDH3B-209ENST00000488299 ABCC8Q09428 1581 aa28.96■■■□□ 2.23
IDH3B-209ENST00000488299 CUX1P39880 1505 aa28.9■■■□□ 2.22
IDH3B-209ENST00000488299 WRNQ14191 1432 aaPredicted RBP eCLIP28.88■■■□□ 2.21
IDH3B-209ENST00000488299 POLA1P09884 1462 aaPredicted RBP28.77■■■□□ 2.2
IDH3B-209ENST00000488299 FGD5Q6ZNL6 1462 aa28.75■■■□□ 2.19
IDH3B-209ENST00000488299 SYNJ1O43426 1573 aa28.75■■■□□ 2.19
IDH3B-209ENST00000488299 IFT140Q96RY7 1462 aa28.72■■■□□ 2.19
IDH3B-209ENST00000488299 TOP2BQ02880 1626 aa28.7■■■□□ 2.18
IDH3B-209ENST00000488299 BIVM-ERCC5R4GMW8 1640 aa28.7■■■□□ 2.18
IDH3B-209ENST00000488299 RAD54L2Q9Y4B4 1467 aa28.68■■■□□ 2.18
IDH3B-209ENST00000488299 TARBP1Q13395 1621 aaKnown RBP28.66■■■□□ 2.18
IDH3B-209ENST00000488299 SOGA1O94964 1423 aa28.66■■■□□ 2.18
IDH3B-209ENST00000488299 ZNF608Q9ULD9 1512 aaPredicted RBP28.62■■■□□ 2.17
IDH3B-209ENST00000488299 EIF4G3O43432 1585 aaKnown RBP28.5■■■□□ 2.15
IDH3B-209ENST00000488299 AQRO60306 1485 aaKnown RBP eCLIP28.49■■■□□ 2.158e-7■■■■■ 26.8
IDH3B-209ENST00000488299 WDR97A6NE52 1622 aa28.49■■■□□ 2.15
IDH3B-209ENST00000488299 TDRD9Q8NDG6 1382 aaKnown RBP28.48■■■□□ 2.15
IDH3B-209ENST00000488299 FAM9AQ8IZU1 332 aaPredicted RBP28.48■■■□□ 2.15
IDH3B-209ENST00000488299 ABCA10Q8WWZ4 1543 aa28.46■■■□□ 2.15
IDH3B-209ENST00000488299 ABCA5Q8WWZ7 1642 aa28.34■■■□□ 2.13
IDH3B-209ENST00000488299 EEA1Q15075 1411 aa28.33■■■□□ 2.13
IDH3B-209ENST00000488299 GAPVD1Q14C86 1478 aa28.32■■■□□ 2.12
IDH3B-209ENST00000488299 RUSC2Q8N2Y8 1516 aa28.29■■■□□ 2.12
IDH3B-209ENST00000488299 GRIN2BQ13224 1484 aa28.27■■■□□ 2.12
IDH3B-209ENST00000488299 PBRM1Q86U86 1689 aa28.26■■■□□ 2.11
IDH3B-209ENST00000488299 CSRNP3Q8WYN3 585 aa28.25■■■□□ 2.11
IDH3B-209ENST00000488299 LOC105371045A0A1W2PR82 267 aa28.22■■■□□ 2.11
IDH3B-209ENST00000488299 SNAPC4Q5SXM2 1469 aa28.22■■■□□ 2.11
IDH3B-209ENST00000488299 KIF27Q86VH2 1401 aa28.21■■■□□ 2.11
IDH3B-209ENST00000488299 MAGI1Q96QZ7 1491 aaPredicted RBP28.15■■■□□ 2.1
IDH3B-209ENST00000488299 ERICH3Q5RHP9 1530 aa28.12■■■□□ 2.09
IDH3B-209ENST00000488299 CHD1O14646 1710 aa28.09■■■□□ 2.09
IDH3B-209ENST00000488299 FBLN2P98095 1184 aa28.09■■■□□ 2.09
IDH3B-209ENST00000488299 EHMT2Q96KQ7 1210 aa28.08■■■□□ 2.09
IDH3B-209ENST00000488299 SYNJ2O15056 1496 aa28.05■■■□□ 2.08
IDH3B-209ENST00000488299 ADAMTS12P58397 1594 aa28.05■■■□□ 2.08
IDH3B-209ENST00000488299 IGF1RP08069 1367 aa28.04■■■□□ 2.08
IDH3B-209ENST00000488299 CHMP7Q8WUX9 453 aaPredicted RBP28.03■■■□□ 2.08
IDH3B-209ENST00000488299 OSCARQ8IYS5 282 aa28.02■■■□□ 2.08
IDH3B-209ENST00000488299 FHAD1B1AJZ9 1412 aa27.99■■■□□ 2.07
IDH3B-209ENST00000488299 DNAJC5Q9H3Z4 198 aa27.96■■■□□ 2.07
IDH3B-209ENST00000488299 GRIN2AQ12879 1464 aa27.92■■■□□ 2.06
IDH3B-209ENST00000488299 CUL7Q14999 1698 aa27.92■■■□□ 2.06
IDH3B-209ENST00000488299 KIF21BO75037 1637 aa27.9■■■□□ 2.06
IDH3B-209ENST00000488299 GOLGA3Q08378 1498 aa27.9■■■□□ 2.06
IDH3B-209ENST00000488299 PRXQ9BXM0 1461 aa27.9■■■□□ 2.06
IDH3B-209ENST00000488299 UBTFP17480 764 aaKnown RBP27.89■■■□□ 2.05
IDH3B-209ENST00000488299 CARMIL1Q5VZK9 1371 aa27.87■■■□□ 2.05
IDH3B-209ENST00000488299 RAPGEF2Q9Y4G8 1499 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms