RNA–Protein interactions for RNA: ENST00000488137.5

C1orf109-208, Transcript of chromosome 1 open reading frame 109, humanhuman

TSL 3

Gene C1orf109, Length 717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf109-208ENST00000488137 NISCHQ9Y2I1 1504 aa32.15■■■□□ 2.74
C1orf109-208ENST00000488137 CCDC180Q9P1Z9 1646 aa28.75■■■□□ 2.19
C1orf109-208ENST00000488137 ABCC9O60706 1549 aa28.04■■■□□ 2.08
C1orf109-208ENST00000488137 RB1CC1Q8TDY2 1594 aa27.05■■□□□ 1.92
C1orf109-208ENST00000488137 NACADO15069 1562 aa26.98■■□□□ 1.91
C1orf109-208ENST00000488137 DCAF8L2P0C7V8 631 aa26.83■■□□□ 1.89
C1orf109-208ENST00000488137 MYO15BQ96JP2 1530 aa26.8■■□□□ 1.88
C1orf109-208ENST00000488137 ZCCHC6Q5VYS8 1495 aaKnown RBP26.79■■□□□ 1.88
C1orf109-208ENST00000488137 DCAF1Q9Y4B6 1507 aa26.65■■□□□ 1.86
C1orf109-208ENST00000488137 UNC13AQ9UPW8 1703 aa26.42■■□□□ 1.82
C1orf109-208ENST00000488137 SCRIBQ14160 1630 aa26.14■■□□□ 1.78
C1orf109-208ENST00000488137 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
C1orf109-208ENST00000488137 PABPN1Q86U42 306 aaKnown RBP eCLIP26.1■■□□□ 1.77
C1orf109-208ENST00000488137 SHROOM4Q9ULL8 1493 aa26■■□□□ 1.75
C1orf109-208ENST00000488137 DNAJC5BQ9UF47 199 aa25.61■■□□□ 1.69
C1orf109-208ENST00000488137 EIF4G1Q04637 1599 aaKnown RBP25.5■■□□□ 1.67
C1orf109-208ENST00000488137 CC2D2AQ9P2K1 1620 aa25.41■■□□□ 1.66
C1orf109-208ENST00000488137 CECR2Q9BXF3 1484 aa25.23■■□□□ 1.63
C1orf109-208ENST00000488137 SMARCA4P51532 1647 aa25.01■■□□□ 1.59
C1orf109-208ENST00000488137 BAZ1AQ9NRL2 1556 aaPredicted RBP25■■□□□ 1.59
C1orf109-208ENST00000488137 SMARCA2P51531 1590 aa24.88■■□□□ 1.57
C1orf109-208ENST00000488137 NCAPD3P42695 1498 aa24.83■■□□□ 1.56
C1orf109-208ENST00000488137 ATAD2BQ9ULI0 1458 aa24.82■■□□□ 1.56
C1orf109-208ENST00000488137 HMGXB3Q12766 1538 aa24.78■■□□□ 1.56
C1orf109-208ENST00000488137 PEG3Q9GZU2 1588 aa24.76■■□□□ 1.55
C1orf109-208ENST00000488137 MROH2BQ7Z745 1585 aa24.74■■□□□ 1.55
C1orf109-208ENST00000488137 BAZ1BQ9UIG0 1483 aaKnown RBP24.69■■□□□ 1.54
C1orf109-208ENST00000488137 WIZO95785 1651 aa24.51■■□□□ 1.51
C1orf109-208ENST00000488137 RSF1Q96T23 1441 aaPredicted RBP24.41■■□□□ 1.5
C1orf109-208ENST00000488137 TOP2AP11388 1531 aaKnown RBP24.29■■□□□ 1.48
C1orf109-208ENST00000488137 LAMC3Q9Y6N6 1575 aa24.28■■□□□ 1.48
C1orf109-208ENST00000488137 ERCC6Q03468 1493 aa24.27■■□□□ 1.48
C1orf109-208ENST00000488137 NESP48681 1621 aa24.21■■□□□ 1.47
C1orf109-208ENST00000488137 CADPSQ9ULU8 1353 aa24.09■■□□□ 1.45
C1orf109-208ENST00000488137 PDS5BQ9NTI5 1447 aa24.07■■□□□ 1.44
C1orf109-208ENST00000488137 KIF21AQ7Z4S6 1674 aa24.04■■□□□ 1.44
C1orf109-208ENST00000488137 CUX2O14529 1486 aa24.03■■□□□ 1.44
C1orf109-208ENST00000488137 THOC2Q8NI27 1593 aaKnown RBP23.96■■□□□ 1.43
C1orf109-208ENST00000488137 CFTRP13569 1480 aa23.94■■□□□ 1.42
C1orf109-208ENST00000488137 PRDM2Q13029 1718 aa23.93■■□□□ 1.42
C1orf109-208ENST00000488137 CCDC88BA6NC98 1476 aa23.91■■□□□ 1.42
C1orf109-208ENST00000488137 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
C1orf109-208ENST00000488137 FANCD2Q9BXW9 1451 aa23.85■■□□□ 1.41
C1orf109-208ENST00000488137 MRC2Q9UBG0 1479 aa23.83■■□□□ 1.41
C1orf109-208ENST00000488137 WDR62O43379 1518 aa23.76■■□□□ 1.39
C1orf109-208ENST00000488137 SUPT5HO00267 1087 aaKnown RBP23.72■■□□□ 1.39
C1orf109-208ENST00000488137 URB2Q14146 1524 aaKnown RBP23.58■■□□□ 1.36
C1orf109-208ENST00000488137 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
C1orf109-208ENST00000488137 DNMBPQ6XZF7 1577 aa23.48■■□□□ 1.35
C1orf109-208ENST00000488137 TOPBP1Q92547 1522 aa23.46■■□□□ 1.35
C1orf109-208ENST00000488137 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
C1orf109-208ENST00000488137 POLA1P09884 1462 aaPredicted RBP23.25■■□□□ 1.31
C1orf109-208ENST00000488137 CUX1P39880 1505 aa23.23■■□□□ 1.31
C1orf109-208ENST00000488137 DNAJC5Q9H3Z4 198 aa23.22■■□□□ 1.31
C1orf109-208ENST00000488137 TARBP1Q13395 1621 aaKnown RBP23.21■■□□□ 1.31
C1orf109-208ENST00000488137 EIF4G3O43432 1585 aaKnown RBP23.2■■□□□ 1.3
C1orf109-208ENST00000488137 FGD5Q6ZNL6 1462 aa23.19■■□□□ 1.3
C1orf109-208ENST00000488137 ZNF608Q9ULD9 1512 aaPredicted RBP23.17■■□□□ 1.3
C1orf109-208ENST00000488137 WDR97A6NE52 1622 aa23.15■■□□□ 1.3
C1orf109-208ENST00000488137 SOGA1O94964 1423 aa23.13■■□□□ 1.29
C1orf109-208ENST00000488137 BIVM-ERCC5R4GMW8 1640 aa23.1■■□□□ 1.29
C1orf109-208ENST00000488137 RAD54L2Q9Y4B4 1467 aa23.1■■□□□ 1.29
C1orf109-208ENST00000488137 WRNQ14191 1432 aaPredicted RBP eCLIP23.09■■□□□ 1.29
C1orf109-208ENST00000488137 TOP2BQ02880 1626 aa23.08■■□□□ 1.28
C1orf109-208ENST00000488137 AQRO60306 1485 aaKnown RBP eCLIP23.03■■□□□ 1.28
C1orf109-208ENST00000488137 SYNJ1O43426 1573 aa23.02■■□□□ 1.28
C1orf109-208ENST00000488137 TDRD9Q8NDG6 1382 aaKnown RBP22.97■■□□□ 1.27
C1orf109-208ENST00000488137 ABCA10Q8WWZ4 1543 aa22.97■■□□□ 1.27
C1orf109-208ENST00000488137 PBRM1Q86U86 1689 aa22.94■■□□□ 1.26
C1orf109-208ENST00000488137 OSCARQ8IYS5 282 aa22.93■■□□□ 1.26
C1orf109-208ENST00000488137 CHD1O14646 1710 aa22.93■■□□□ 1.26
C1orf109-208ENST00000488137 ABCA5Q8WWZ7 1642 aa22.92■■□□□ 1.26
C1orf109-208ENST00000488137 GRIN2BQ13224 1484 aa22.92■■□□□ 1.26
C1orf109-208ENST00000488137 MAGI1Q96QZ7 1491 aaPredicted RBP22.9■■□□□ 1.26
C1orf109-208ENST00000488137 GAPVD1Q14C86 1478 aa22.89■■□□□ 1.25
C1orf109-208ENST00000488137 SNAPC4Q5SXM2 1469 aa22.89■■□□□ 1.25
C1orf109-208ENST00000488137 FBLN2P98095 1184 aa22.8■■□□□ 1.24
C1orf109-208ENST00000488137 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
C1orf109-208ENST00000488137 CHMP7Q8WUX9 453 aaPredicted RBP22.74■■□□□ 1.23
C1orf109-208ENST00000488137 ERICH3Q5RHP9 1530 aa22.73■■□□□ 1.23
C1orf109-208ENST00000488137 ADAMTS12P58397 1594 aa22.72■■□□□ 1.23
C1orf109-208ENST00000488137 FHAD1B1AJZ9 1412 aa22.64■■□□□ 1.21
C1orf109-208ENST00000488137 RIMBP3CA6NJZ7 1639 aa22.64■■□□□ 1.21
C1orf109-208ENST00000488137 RIMBP3BA6NNM3 1639 aa22.64■■□□□ 1.21
C1orf109-208ENST00000488137 RIMBP3Q9UFD9 1639 aa22.64■■□□□ 1.21
C1orf109-208ENST00000488137 KIF27Q86VH2 1401 aa22.63■■□□□ 1.21
C1orf109-208ENST00000488137 CLASP1Q7Z460 1538 aa22.62■■□□□ 1.21
C1orf109-208ENST00000488137 GRIN2AQ12879 1464 aa22.62■■□□□ 1.21
C1orf109-208ENST00000488137 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
C1orf109-208ENST00000488137 CUL7Q14999 1698 aa22.58■■□□□ 1.2
C1orf109-208ENST00000488137 CEP170Q5SW79 1584 aa22.5■■□□□ 1.19
C1orf109-208ENST00000488137 NUP160Q12769 1436 aa22.49■■□□□ 1.19
C1orf109-208ENST00000488137 TRIM41Q8WV44 630 aa22.48■■□□□ 1.19
C1orf109-208ENST00000488137 IGF1RP08069 1367 aa22.43■■□□□ 1.18
C1orf109-208ENST00000488137 RUSC2Q8N2Y8 1516 aa22.39■■□□□ 1.17
C1orf109-208ENST00000488137 ARAP1Q96P48 1450 aa22.39■■□□□ 1.17
C1orf109-208ENST00000488137 SHROOM2Q13796 1616 aa22.38■■□□□ 1.17
C1orf109-208ENST00000488137 CARMIL1Q5VZK9 1371 aa22.36■■□□□ 1.17
C1orf109-208ENST00000488137 CYB5RLQ6IPT4 315 aa22.32■■□□□ 1.16
C1orf109-208ENST00000488137 KIAA0586Q9BVV6 1533 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms