RNA–Protein interactions for RNA: ENST00000487589.6

AMT-216, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 811 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-216ENST00000487589 NISCHQ9Y2I1 1504 aa30.75■■■□□ 2.51
AMT-216ENST00000487589 CCDC180Q9P1Z9 1646 aa27.23■■□□□ 1.95
AMT-216ENST00000487589 ABCC9O60706 1549 aa26.65■■□□□ 1.86
AMT-216ENST00000487589 DCAF8L2P0C7V8 631 aa25.67■■□□□ 1.7
AMT-216ENST00000487589 ZCCHC6Q5VYS8 1495 aaKnown RBP25.64■■□□□ 1.69
AMT-216ENST00000487589 NACADO15069 1562 aa25.63■■□□□ 1.69
AMT-216ENST00000487589 RB1CC1Q8TDY2 1594 aa25.62■■□□□ 1.69
AMT-216ENST00000487589 MYO15BQ96JP2 1530 aa25.53■■□□□ 1.68
AMT-216ENST00000487589 DCAF1Q9Y4B6 1507 aa25.44■■□□□ 1.66
AMT-216ENST00000487589 UNC13AQ9UPW8 1703 aa24.98■■□□□ 1.59
AMT-216ENST00000487589 PABPN1Q86U42 306 aaKnown RBP eCLIP24.96■■□□□ 1.593e-6■■■■□ 23.3
AMT-216ENST00000487589 SCRIBQ14160 1630 aa24.9■■□□□ 1.58
AMT-216ENST00000487589 BICRAQ9NZM4 1560 aa24.88■■□□□ 1.57
AMT-216ENST00000487589 SHROOM4Q9ULL8 1493 aa24.63■■□□□ 1.53
AMT-216ENST00000487589 DNAJC5BQ9UF47 199 aa24.47■■□□□ 1.51
AMT-216ENST00000487589 EIF4G1Q04637 1599 aaKnown RBP24.21■■□□□ 1.47
AMT-216ENST00000487589 CC2D2AQ9P2K1 1620 aa24.08■■□□□ 1.45
AMT-216ENST00000487589 CECR2Q9BXF3 1484 aa23.98■■□□□ 1.43
AMT-216ENST00000487589 SMARCA4P51532 1647 aa23.82■■□□□ 1.4
AMT-216ENST00000487589 BAZ1AQ9NRL2 1556 aaPredicted RBP23.81■■□□□ 1.4
AMT-216ENST00000487589 ATAD2BQ9ULI0 1458 aa23.72■■□□□ 1.39
AMT-216ENST00000487589 MROH2BQ7Z745 1585 aa23.71■■□□□ 1.39
AMT-216ENST00000487589 NCAPD3P42695 1498 aa23.69■■□□□ 1.38
AMT-216ENST00000487589 SMARCA2P51531 1590 aa23.65■■□□□ 1.38
AMT-216ENST00000487589 PEG3Q9GZU2 1588 aa23.6■■□□□ 1.37
AMT-216ENST00000487589 HMGXB3Q12766 1538 aa23.55■■□□□ 1.36
AMT-216ENST00000487589 BAZ1BQ9UIG0 1483 aaKnown RBP23.5■■□□□ 1.35
AMT-216ENST00000487589 RSF1Q96T23 1441 aaPredicted RBP23.5■■□□□ 1.35
AMT-216ENST00000487589 WIZO95785 1651 aa23.41■■□□□ 1.34
AMT-216ENST00000487589 TOP2AP11388 1531 aaKnown RBP23.19■■□□□ 1.3
AMT-216ENST00000487589 NESP48681 1621 aa23.1■■□□□ 1.29
AMT-216ENST00000487589 CADPSQ9ULU8 1353 aa23.01■■□□□ 1.27
AMT-216ENST00000487589 LAMC3Q9Y6N6 1575 aa23.01■■□□□ 1.27
AMT-216ENST00000487589 CCDC88BA6NC98 1476 aa22.95■■□□□ 1.26
AMT-216ENST00000487589 ERCC6Q03468 1493 aa22.95■■□□□ 1.26
AMT-216ENST00000487589 SUPT5HO00267 1087 aaKnown RBP22.93■■□□□ 1.26
AMT-216ENST00000487589 CFTRP13569 1480 aa22.89■■□□□ 1.25
AMT-216ENST00000487589 PDS5BQ9NTI5 1447 aa22.89■■□□□ 1.25
AMT-216ENST00000487589 KIF21AQ7Z4S6 1674 aa22.74■■□□□ 1.23
AMT-216ENST00000487589 FANCD2Q9BXW9 1451 aa22.73■■□□□ 1.23
AMT-216ENST00000487589 CUX2O14529 1486 aa22.7■■□□□ 1.22
AMT-216ENST00000487589 THOC2Q8NI27 1593 aaKnown RBP22.7■■□□□ 1.22
AMT-216ENST00000487589 CEP164Q9UPV0 1460 aa22.68■■□□□ 1.22
AMT-216ENST00000487589 MRC2Q9UBG0 1479 aa22.65■■□□□ 1.22
AMT-216ENST00000487589 PRDM2Q13029 1718 aa22.57■■□□□ 1.2
AMT-216ENST00000487589 WDR62O43379 1518 aa22.56■■□□□ 1.2
AMT-216ENST00000487589 URB2Q14146 1524 aaKnown RBP22.51■■□□□ 1.19
AMT-216ENST00000487589 TOPBP1Q92547 1522 aa22.37■■□□□ 1.17
AMT-216ENST00000487589 ABCC8Q09428 1581 aa22.34■■□□□ 1.17
AMT-216ENST00000487589 DNMBPQ6XZF7 1577 aa22.33■■□□□ 1.16
AMT-216ENST00000487589 CUX1P39880 1505 aa22.24■■□□□ 1.15
AMT-216ENST00000487589 IFT140Q96RY7 1462 aa22.22■■□□□ 1.15
AMT-216ENST00000487589 POLA1P09884 1462 aaPredicted RBP22.2■■□□□ 1.14
AMT-216ENST00000487589 FGD5Q6ZNL6 1462 aa22.15■■□□□ 1.14
AMT-216ENST00000487589 ZNF608Q9ULD9 1512 aaPredicted RBP22.12■■□□□ 1.13
AMT-216ENST00000487589 WRNQ14191 1432 aaPredicted RBP eCLIP22.12■■□□□ 1.13
AMT-216ENST00000487589 RAD54L2Q9Y4B4 1467 aa22.11■■□□□ 1.13
AMT-216ENST00000487589 SOGA1O94964 1423 aa22.11■■□□□ 1.13
AMT-216ENST00000487589 TARBP1Q13395 1621 aaKnown RBP22.1■■□□□ 1.13
AMT-216ENST00000487589 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
AMT-216ENST00000487589 TOP2BQ02880 1626 aa22.03■■□□□ 1.12
AMT-216ENST00000487589 AQRO60306 1485 aaKnown RBP eCLIP22.02■■□□□ 1.128e-7■■■■□ 24.7
AMT-216ENST00000487589 BIVM-ERCC5R4GMW8 1640 aa22■■□□□ 1.11
AMT-216ENST00000487589 EIF4G3O43432 1585 aaKnown RBP21.99■■□□□ 1.11
AMT-216ENST00000487589 TDRD9Q8NDG6 1382 aaKnown RBP21.99■■□□□ 1.11
AMT-216ENST00000487589 DNAJC5Q9H3Z4 198 aa21.95■■□□□ 1.1
AMT-216ENST00000487589 ABCA10Q8WWZ4 1543 aa21.95■■□□□ 1.1
AMT-216ENST00000487589 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
AMT-216ENST00000487589 GAPVD1Q14C86 1478 aa21.85■■□□□ 1.09
AMT-216ENST00000487589 GRIN2BQ13224 1484 aa21.83■■□□□ 1.09
AMT-216ENST00000487589 ABCA5Q8WWZ7 1642 aa21.81■■□□□ 1.08
AMT-216ENST00000487589 SNAPC4Q5SXM2 1469 aa21.8■■□□□ 1.08
AMT-216ENST00000487589 OSCARQ8IYS5 282 aa21.78■■□□□ 1.08
AMT-216ENST00000487589 MAGI1Q96QZ7 1491 aaPredicted RBP21.76■■□□□ 1.07
AMT-216ENST00000487589 FBLN2P98095 1184 aa21.71■■□□□ 1.07
AMT-216ENST00000487589 PBRM1Q86U86 1689 aa21.7■■□□□ 1.06
AMT-216ENST00000487589 SYNJ2O15056 1496 aa21.68■■□□□ 1.06
AMT-216ENST00000487589 CHMP7Q8WUX9 453 aaPredicted RBP21.67■■□□□ 1.06
AMT-216ENST00000487589 ERICH3Q5RHP9 1530 aa21.65■■□□□ 1.06
AMT-216ENST00000487589 KIF27Q86VH2 1401 aa21.65■■□□□ 1.06
AMT-216ENST00000487589 TRIM41Q8WV44 630 aa21.65■■□□□ 1.06
AMT-216ENST00000487589 CHD1O14646 1710 aa21.65■■□□□ 1.06
AMT-216ENST00000487589 FHAD1B1AJZ9 1412 aa21.61■■□□□ 1.05
AMT-216ENST00000487589 ADAMTS12P58397 1594 aa21.61■■□□□ 1.05
AMT-216ENST00000487589 IGF1RP08069 1367 aa21.6■■□□□ 1.05
AMT-216ENST00000487589 GRIN2AQ12879 1464 aa21.55■■□□□ 1.04
AMT-216ENST00000487589 CLASP1Q7Z460 1538 aa21.5■■□□□ 1.03
AMT-216ENST00000487589 RUSC2Q8N2Y8 1516 aa21.5■■□□□ 1.03
AMT-216ENST00000487589 NUP160Q12769 1436 aa21.48■■□□□ 1.03
AMT-216ENST00000487589 CHIC1Q5VXU3 224 aa21.47■■□□□ 1.03
AMT-216ENST00000487589 CARMIL1Q5VZK9 1371 aa21.45■■□□□ 1.02
AMT-216ENST00000487589 CEP170Q5SW79 1584 aa21.43■■□□□ 1.02
AMT-216ENST00000487589 CUL7Q14999 1698 aa21.43■■□□□ 1.02
AMT-216ENST00000487589 ARHGEF11O15085 1522 aa21.41■■□□□ 1.02
AMT-216ENST00000487589 RIMBP3CA6NJZ7 1639 aa21.37■■□□□ 1.01
AMT-216ENST00000487589 RIMBP3BA6NNM3 1639 aa21.37■■□□□ 1.01
AMT-216ENST00000487589 RIMBP3Q9UFD9 1639 aa21.37■■□□□ 1.01
AMT-216ENST00000487589 RAPGEF2Q9Y4G8 1499 aa21.31■■□□□ 1
AMT-216ENST00000487589 EEA1Q15075 1411 aa21.28■■□□□ 1
AMT-216ENST00000487589 ARAP1Q96P48 1450 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms