RNA–Protein interactions for RNA: ENST00000487501.2

PCED1A-206, Transcript of PC-esterase domain containing 1A, humanhuman

TSL 3

Gene PCED1A, Length 712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1A-206ENST00000487501 NISCHQ9Y2I1 1504 aa27.68■■■□□ 2.02
PCED1A-206ENST00000487501 CCDC180Q9P1Z9 1646 aa24.48■■□□□ 1.51
PCED1A-206ENST00000487501 ABCC9O60706 1549 aa24.34■■□□□ 1.49
PCED1A-206ENST00000487501 RB1CC1Q8TDY2 1594 aa23.11■■□□□ 1.29
PCED1A-206ENST00000487501 ZCCHC6Q5VYS8 1495 aaKnown RBP23.1■■□□□ 1.29
PCED1A-206ENST00000487501 DCAF8L2P0C7V8 631 aa23.08■■□□□ 1.29
PCED1A-206ENST00000487501 NACADO15069 1562 aa23.01■■□□□ 1.27
PCED1A-206ENST00000487501 MYO15BQ96JP2 1530 aa22.97■■□□□ 1.27
PCED1A-206ENST00000487501 DCAF1Q9Y4B6 1507 aa22.93■■□□□ 1.26
PCED1A-206ENST00000487501 DNAJC5BQ9UF47 199 aa22.79■■□□□ 1.24
PCED1A-206ENST00000487501 PABPN1Q86U42 306 aaKnown RBP eCLIP22.68■■□□□ 1.226e-7■■■□□ 18.8
PCED1A-206ENST00000487501 UNC13AQ9UPW8 1703 aa22.65■■□□□ 1.22
PCED1A-206ENST00000487501 BICRAQ9NZM4 1560 aa22.46■■□□□ 1.19
PCED1A-206ENST00000487501 SCRIBQ14160 1630 aa22.34■■□□□ 1.17
PCED1A-206ENST00000487501 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
PCED1A-206ENST00000487501 CC2D2AQ9P2K1 1620 aa21.95■■□□□ 1.1
PCED1A-206ENST00000487501 EIF4G1Q04637 1599 aaKnown RBP21.9■■□□□ 1.1
PCED1A-206ENST00000487501 CECR2Q9BXF3 1484 aa21.87■■□□□ 1.09
PCED1A-206ENST00000487501 BAZ1AQ9NRL2 1556 aaPredicted RBP21.44■■□□□ 1.02
PCED1A-206ENST00000487501 SMARCA4P51532 1647 aa21.4■■□□□ 1.02
PCED1A-206ENST00000487501 MROH2BQ7Z745 1585 aa21.31■■□□□ 1
PCED1A-206ENST00000487501 ATAD2BQ9ULI0 1458 aa21.27■■□□□ 1
PCED1A-206ENST00000487501 SMARCA2P51531 1590 aa21.26■□□□□ 0.99
PCED1A-206ENST00000487501 NCAPD3P42695 1498 aa21.25■□□□□ 0.99
PCED1A-206ENST00000487501 PEG3Q9GZU2 1588 aa21.22■□□□□ 0.99
PCED1A-206ENST00000487501 RSF1Q96T23 1441 aaPredicted RBP21.18■□□□□ 0.98
PCED1A-206ENST00000487501 HMGXB3Q12766 1538 aa21.13■□□□□ 0.97
PCED1A-206ENST00000487501 BAZ1BQ9UIG0 1483 aaKnown RBP21.1■□□□□ 0.97
PCED1A-206ENST00000487501 WIZO95785 1651 aa21.07■□□□□ 0.96
PCED1A-206ENST00000487501 ERCC6Q03468 1493 aa20.99■□□□□ 0.95
PCED1A-206ENST00000487501 NESP48681 1621 aa20.93■□□□□ 0.94
PCED1A-206ENST00000487501 TOP2AP11388 1531 aaKnown RBP20.89■□□□□ 0.94
PCED1A-206ENST00000487501 CUX2O14529 1486 aa20.86■□□□□ 0.93
PCED1A-206ENST00000487501 SUPT5HO00267 1087 aaKnown RBP20.83■□□□□ 0.93
PCED1A-206ENST00000487501 DNAJC5Q9H3Z4 198 aa20.83■□□□□ 0.93
PCED1A-206ENST00000487501 LAMC3Q9Y6N6 1575 aa20.7■□□□□ 0.9
PCED1A-206ENST00000487501 CCDC88BA6NC98 1476 aa20.67■□□□□ 0.9
PCED1A-206ENST00000487501 KIF21AQ7Z4S6 1674 aa20.66■□□□□ 0.9
PCED1A-206ENST00000487501 THOC2Q8NI27 1593 aaKnown RBP20.65■□□□□ 0.9
PCED1A-206ENST00000487501 CADPSQ9ULU8 1353 aa20.65■□□□□ 0.9
PCED1A-206ENST00000487501 PDS5BQ9NTI5 1447 aa20.58■□□□□ 0.88
PCED1A-206ENST00000487501 CFTRP13569 1480 aa20.56■□□□□ 0.88
PCED1A-206ENST00000487501 MRC2Q9UBG0 1479 aa20.43■□□□□ 0.86
PCED1A-206ENST00000487501 FANCD2Q9BXW9 1451 aa20.38■□□□□ 0.85
PCED1A-206ENST00000487501 WDR62O43379 1518 aa20.36■□□□□ 0.85
PCED1A-206ENST00000487501 CEP164Q9UPV0 1460 aa20.36■□□□□ 0.85
PCED1A-206ENST00000487501 PRDM2Q13029 1718 aa20.33■□□□□ 0.85
PCED1A-206ENST00000487501 URB2Q14146 1524 aaKnown RBP20.18■□□□□ 0.82
PCED1A-206ENST00000487501 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
PCED1A-206ENST00000487501 TOPBP1Q92547 1522 aa20.07■□□□□ 0.8
PCED1A-206ENST00000487501 DNMBPQ6XZF7 1577 aa20.06■□□□□ 0.8
PCED1A-206ENST00000487501 TRIM41Q8WV44 630 aa20.04■□□□□ 0.8
PCED1A-206ENST00000487501 CUX1P39880 1505 aa19.98■□□□□ 0.79
PCED1A-206ENST00000487501 WRNQ14191 1432 aaPredicted RBP eCLIP19.98■□□□□ 0.79
PCED1A-206ENST00000487501 OSCARQ8IYS5 282 aa19.96■□□□□ 0.79
PCED1A-206ENST00000487501 ZNF608Q9ULD9 1512 aaPredicted RBP19.95■□□□□ 0.78
PCED1A-206ENST00000487501 IFT140Q96RY7 1462 aa19.92■□□□□ 0.78
PCED1A-206ENST00000487501 POLA1P09884 1462 aaPredicted RBP19.92■□□□□ 0.78
PCED1A-206ENST00000487501 FGD5Q6ZNL6 1462 aa19.89■□□□□ 0.77
PCED1A-206ENST00000487501 TOP2BQ02880 1626 aa19.87■□□□□ 0.77
PCED1A-206ENST00000487501 SOGA1O94964 1423 aa19.87■□□□□ 0.77
PCED1A-206ENST00000487501 SYNJ1O43426 1573 aa19.86■□□□□ 0.77
PCED1A-206ENST00000487501 BIVM-ERCC5R4GMW8 1640 aa19.85■□□□□ 0.77
PCED1A-206ENST00000487501 EIF4G3O43432 1585 aaKnown RBP19.83■□□□□ 0.76
PCED1A-206ENST00000487501 RAD54L2Q9Y4B4 1467 aa19.81■□□□□ 0.76
PCED1A-206ENST00000487501 TARBP1Q13395 1621 aaKnown RBP19.8■□□□□ 0.76
PCED1A-206ENST00000487501 AQRO60306 1485 aaKnown RBP eCLIP19.77■□□□□ 0.765e-12■■■■■ 66.2
PCED1A-206ENST00000487501 ABCA10Q8WWZ4 1543 aa19.73■□□□□ 0.75
PCED1A-206ENST00000487501 RIMBP3CA6NJZ7 1639 aa19.73■□□□□ 0.75
PCED1A-206ENST00000487501 RIMBP3BA6NNM3 1639 aa19.73■□□□□ 0.75
PCED1A-206ENST00000487501 RIMBP3Q9UFD9 1639 aa19.73■□□□□ 0.75
PCED1A-206ENST00000487501 TDRD9Q8NDG6 1382 aaKnown RBP19.71■□□□□ 0.75
PCED1A-206ENST00000487501 CHD1O14646 1710 aa19.71■□□□□ 0.75
PCED1A-206ENST00000487501 WDR97A6NE52 1622 aa19.7■□□□□ 0.74
PCED1A-206ENST00000487501 FBLN2P98095 1184 aa19.68■□□□□ 0.74
PCED1A-206ENST00000487501 ARHGEF11O15085 1522 aa19.65■□□□□ 0.74
PCED1A-206ENST00000487501 GAPVD1Q14C86 1478 aa19.63■□□□□ 0.73
PCED1A-206ENST00000487501 GRIN2BQ13224 1484 aa19.6■□□□□ 0.73
PCED1A-206ENST00000487501 ABCA5Q8WWZ7 1642 aa19.59■□□□□ 0.73
PCED1A-206ENST00000487501 CHIC1Q5VXU3 224 aa19.58■□□□□ 0.72
PCED1A-206ENST00000487501 SNAPC4Q5SXM2 1469 aa19.56■□□□□ 0.72
PCED1A-206ENST00000487501 KIF27Q86VH2 1401 aa19.56■□□□□ 0.72
PCED1A-206ENST00000487501 CYB5RLQ6IPT4 315 aa19.54■□□□□ 0.72
PCED1A-206ENST00000487501 MAGI1Q96QZ7 1491 aaPredicted RBP19.53■□□□□ 0.72
PCED1A-206ENST00000487501 ERICH3Q5RHP9 1530 aa19.51■□□□□ 0.71
PCED1A-206ENST00000487501 PBRM1Q86U86 1689 aa19.5■□□□□ 0.71
PCED1A-206ENST00000487501 CHMP7Q8WUX9 453 aaPredicted RBP19.49■□□□□ 0.71
PCED1A-206ENST00000487501 ARAP1Q96P48 1450 aa19.46■□□□□ 0.71
PCED1A-206ENST00000487501 IGF1RP08069 1367 aa19.45■□□□□ 0.7
PCED1A-206ENST00000487501 SYNJ2O15056 1496 aa19.44■□□□□ 0.7
PCED1A-206ENST00000487501 FHAD1B1AJZ9 1412 aa19.42■□□□□ 0.7
PCED1A-206ENST00000487501 CLASP1Q7Z460 1538 aa19.41■□□□□ 0.7
PCED1A-206ENST00000487501 ADAMTS12P58397 1594 aa19.39■□□□□ 0.69
PCED1A-206ENST00000487501 RUSC2Q8N2Y8 1516 aa19.38■□□□□ 0.69
PCED1A-206ENST00000487501 EEA1Q15075 1411 aa19.35■□□□□ 0.69
PCED1A-206ENST00000487501 CARMIL1Q5VZK9 1371 aa19.35■□□□□ 0.69
PCED1A-206ENST00000487501 CUL7Q14999 1698 aa19.34■□□□□ 0.69
PCED1A-206ENST00000487501 TRHP20396 242 aaPredicted RBP19.33■□□□□ 0.68
PCED1A-206ENST00000487501 GRIN2AQ12879 1464 aa19.33■□□□□ 0.68
PCED1A-206ENST00000487501 CSRNP3Q8WYN3 585 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms