RNA–Protein interactions for RNA: ENST00000487465.5

EMC3-204, Transcript of ER membrane protein complex subunit 3, humanhuman

TSL 1 (best)

Gene EMC3, Length 1,909 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMC3-204ENST00000487465 NISCHQ9Y2I1 1504 aa24.68■■□□□ 1.54
EMC3-204ENST00000487465 CCDC180Q9P1Z9 1646 aa21.72■■□□□ 1.07
EMC3-204ENST00000487465 CHIC1Q5VXU3 224 aa21.57■■□□□ 1.04
EMC3-204ENST00000487465 ABCC9O60706 1549 aa21.25■□□□□ 0.99
EMC3-204ENST00000487465 AEBP2Q6ZN18 517 aaPredicted RBP21.12■□□□□ 0.97
EMC3-204ENST00000487465 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
EMC3-204ENST00000487465 ZCCHC6Q5VYS8 1495 aaKnown RBP20.59■□□□□ 0.89
EMC3-204ENST00000487465 NACADO15069 1562 aa20.42■□□□□ 0.86
EMC3-204ENST00000487465 RB1CC1Q8TDY2 1594 aa20.39■□□□□ 0.85
EMC3-204ENST00000487465 MYO15BQ96JP2 1530 aa20.36■□□□□ 0.85
EMC3-204ENST00000487465 DCAF1Q9Y4B6 1507 aa20.36■□□□□ 0.85
EMC3-204ENST00000487465 UNC13AQ9UPW8 1703 aa19.99■□□□□ 0.79
EMC3-204ENST00000487465 PABPN1Q86U42 306 aaKnown RBP eCLIP19.96■□□□□ 0.79
EMC3-204ENST00000487465 SCRIBQ14160 1630 aa19.96■□□□□ 0.79
EMC3-204ENST00000487465 BICRAQ9NZM4 1560 aa19.9■□□□□ 0.78
EMC3-204ENST00000487465 SHROOM4Q9ULL8 1493 aa19.72■□□□□ 0.75
EMC3-204ENST00000487465 DNAJC5BQ9UF47 199 aa19.49■□□□□ 0.71
EMC3-204ENST00000487465 EIF4G1Q04637 1599 aaKnown RBP19.31■□□□□ 0.68
EMC3-204ENST00000487465 CECR2Q9BXF3 1484 aa19.3■□□□□ 0.68
EMC3-204ENST00000487465 PHF23Q9BUL5 403 aaPredicted RBP19.24■□□□□ 0.67
EMC3-204ENST00000487465 CC2D2AQ9P2K1 1620 aa19.19■□□□□ 0.66
EMC3-204ENST00000487465 SMARCA4P51532 1647 aa19.08■□□□□ 0.64
EMC3-204ENST00000487465 MROH2BQ7Z745 1585 aa19.08■□□□□ 0.64
EMC3-204ENST00000487465 BAZ1AQ9NRL2 1556 aaPredicted RBP19.06■□□□□ 0.64
EMC3-204ENST00000487465 ATAD2BQ9ULI0 1458 aa18.97■□□□□ 0.63
EMC3-204ENST00000487465 RSF1Q96T23 1441 aaPredicted RBP18.93■□□□□ 0.62
EMC3-204ENST00000487465 NCAPD3P42695 1498 aa18.92■□□□□ 0.62
EMC3-204ENST00000487465 PEG3Q9GZU2 1588 aa18.88■□□□□ 0.61
EMC3-204ENST00000487465 SMARCA2P51531 1590 aa18.87■□□□□ 0.61
EMC3-204ENST00000487465 WIZO95785 1651 aa18.85■□□□□ 0.61
EMC3-204ENST00000487465 BAZ1BQ9UIG0 1483 aaKnown RBP18.78■□□□□ 0.6
EMC3-204ENST00000487465 HMGXB3Q12766 1538 aa18.78■□□□□ 0.6
EMC3-204ENST00000487465 SUPT5HO00267 1087 aaKnown RBP18.62■□□□□ 0.57
EMC3-204ENST00000487465 TOP2AP11388 1531 aaKnown RBP18.6■□□□□ 0.57
EMC3-204ENST00000487465 NESP48681 1621 aa18.49■□□□□ 0.55
EMC3-204ENST00000487465 CCDC88BA6NC98 1476 aa18.46■□□□□ 0.55
EMC3-204ENST00000487465 CADPSQ9ULU8 1353 aa18.39■□□□□ 0.53
EMC3-204ENST00000487465 LAMC3Q9Y6N6 1575 aa18.32■□□□□ 0.52
EMC3-204ENST00000487465 CFTRP13569 1480 aa18.32■□□□□ 0.52
EMC3-204ENST00000487465 ERCC6Q03468 1493 aa18.22■□□□□ 0.51
EMC3-204ENST00000487465 PDS5BQ9NTI5 1447 aa18.21■□□□□ 0.5
EMC3-204ENST00000487465 KIF21AQ7Z4S6 1674 aa18.18■□□□□ 0.5
EMC3-204ENST00000487465 FANCD2Q9BXW9 1451 aa18.16■□□□□ 0.5
EMC3-204ENST00000487465 CEP164Q9UPV0 1460 aa18.08■□□□□ 0.48
EMC3-204ENST00000487465 THOC2Q8NI27 1593 aaKnown RBP18.06■□□□□ 0.48
EMC3-204ENST00000487465 PRDM2Q13029 1718 aa18.04■□□□□ 0.48
EMC3-204ENST00000487465 MRC2Q9UBG0 1479 aa18.02■□□□□ 0.47
EMC3-204ENST00000487465 URB2Q14146 1524 aaKnown RBP18.01■□□□□ 0.47
EMC3-204ENST00000487465 PLPPR3Q6T4P5 718 aa17.97■□□□□ 0.47
EMC3-204ENST00000487465 WDR62O43379 1518 aa17.96■□□□□ 0.47
EMC3-204ENST00000487465 CUX2O14529 1486 aa17.92■□□□□ 0.46
EMC3-204ENST00000487465 TOPBP1Q92547 1522 aa17.9■□□□□ 0.46
EMC3-204ENST00000487465 ABCC8Q09428 1581 aa17.87■□□□□ 0.45
EMC3-204ENST00000487465 CUX1P39880 1505 aa17.86■□□□□ 0.45
EMC3-204ENST00000487465 DNMBPQ6XZF7 1577 aa17.84■□□□□ 0.45
EMC3-204ENST00000487465 WRNQ14191 1432 aaPredicted RBP eCLIP17.79■□□□□ 0.44
EMC3-204ENST00000487465 POLA1P09884 1462 aaPredicted RBP17.78■□□□□ 0.44
EMC3-204ENST00000487465 SYNJ1O43426 1573 aa17.76■□□□□ 0.43
EMC3-204ENST00000487465 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
EMC3-204ENST00000487465 RAD54L2Q9Y4B4 1467 aa17.74■□□□□ 0.43
EMC3-204ENST00000487465 ZNF608Q9ULD9 1512 aaPredicted RBP17.71■□□□□ 0.43
EMC3-204ENST00000487465 TOP2BQ02880 1626 aa17.7■□□□□ 0.42
EMC3-204ENST00000487465 SOGA1O94964 1423 aa17.7■□□□□ 0.42
EMC3-204ENST00000487465 TARBP1Q13395 1621 aaKnown RBP17.69■□□□□ 0.42
EMC3-204ENST00000487465 IFT140Q96RY7 1462 aa17.69■□□□□ 0.42
EMC3-204ENST00000487465 BIVM-ERCC5R4GMW8 1640 aa17.66■□□□□ 0.42
EMC3-204ENST00000487465 TDRD9Q8NDG6 1382 aaKnown RBP17.64■□□□□ 0.41
EMC3-204ENST00000487465 AQRO60306 1485 aaKnown RBP eCLIP17.63■□□□□ 0.412e-6■■■■■ 33.8
EMC3-204ENST00000487465 ABCA10Q8WWZ4 1543 aa17.57■□□□□ 0.4
EMC3-204ENST00000487465 EIF4G3O43432 1585 aaKnown RBP17.55■□□□□ 0.4
EMC3-204ENST00000487465 WDR97A6NE52 1622 aa17.54■□□□□ 0.4
EMC3-204ENST00000487465 TRIM41Q8WV44 630 aa17.53■□□□□ 0.4
EMC3-204ENST00000487465 SENP3Q9H4L4 574 aaPredicted RBP17.51■□□□□ 0.39
EMC3-204ENST00000487465 GAPVD1Q14C86 1478 aa17.47■□□□□ 0.39
EMC3-204ENST00000487465 ABCA5Q8WWZ7 1642 aa17.46■□□□□ 0.39
EMC3-204ENST00000487465 GRIN2BQ13224 1484 aa17.42■□□□□ 0.38
EMC3-204ENST00000487465 RUSC2Q8N2Y8 1516 aa17.42■□□□□ 0.38
EMC3-204ENST00000487465 SNAPC4Q5SXM2 1469 aa17.4■□□□□ 0.38
EMC3-204ENST00000487465 EHMT2Q96KQ7 1210 aa17.37■□□□□ 0.37
EMC3-204ENST00000487465 KIF27Q86VH2 1401 aa17.37■□□□□ 0.37
EMC3-204ENST00000487465 IGF1RP08069 1367 aa17.37■□□□□ 0.37
EMC3-204ENST00000487465 PBRM1Q86U86 1689 aa17.36■□□□□ 0.37
EMC3-204ENST00000487465 FBLN2P98095 1184 aa17.36■□□□□ 0.37
EMC3-204ENST00000487465 MAGI1Q96QZ7 1491 aaPredicted RBP17.34■□□□□ 0.37
EMC3-204ENST00000487465 ERICH3Q5RHP9 1530 aa17.32■□□□□ 0.36
EMC3-204ENST00000487465 OSCARQ8IYS5 282 aa17.3■□□□□ 0.36
EMC3-204ENST00000487465 CHMP7Q8WUX9 453 aaPredicted RBP17.3■□□□□ 0.36
EMC3-204ENST00000487465 SYNJ2O15056 1496 aa17.3■□□□□ 0.36
EMC3-204ENST00000487465 DNAJC5Q9H3Z4 198 aa17.29■□□□□ 0.36
EMC3-204ENST00000487465 CHD1O14646 1710 aa17.28■□□□□ 0.36
EMC3-204ENST00000487465 ADAMTS12P58397 1594 aa17.27■□□□□ 0.36
EMC3-204ENST00000487465 FHAD1B1AJZ9 1412 aa17.26■□□□□ 0.35
EMC3-204ENST00000487465 FAM9AQ8IZU1 332 aaPredicted RBP17.23■□□□□ 0.35
EMC3-204ENST00000487465 GRIN2AQ12879 1464 aa17.23■□□□□ 0.35
EMC3-204ENST00000487465 CARMIL1Q5VZK9 1371 aa17.22■□□□□ 0.35
EMC3-204ENST00000487465 CSRNP3Q8WYN3 585 aa17.17■□□□□ 0.34
EMC3-204ENST00000487465 CEP170Q5SW79 1584 aa17.15■□□□□ 0.34
EMC3-204ENST00000487465 NUP160Q12769 1436 aa17.15■□□□□ 0.34
EMC3-204ENST00000487465 CUL7Q14999 1698 aa17.15■□□□□ 0.34
EMC3-204ENST00000487465 PRXQ9BXM0 1461 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 200.9 ms