RNA–Protein interactions for RNA: ENST00000487452.1

PPP1R35-204, Transcript of protein phosphatase 1 regulatory subunit 35, humanhuman

TSL 2

Gene PPP1R35, Length 965 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R35-204ENST00000487452 NISCHQ9Y2I1 1504 aa67.27■■■■■ 8.36
PPP1R35-204ENST00000487452 CCDC180Q9P1Z9 1646 aa59.64■■■■■ 7.14
PPP1R35-204ENST00000487452 ABCC9O60706 1549 aa58.21■■■■■ 6.91
PPP1R35-204ENST00000487452 DCAF8L2P0C7V8 631 aa56.13■■■■■ 6.58
PPP1R35-204ENST00000487452 NACADO15069 1562 aa56.08■■■■■ 6.57
PPP1R35-204ENST00000487452 ZCCHC6Q5VYS8 1495 aaKnown RBP56.08■■■■■ 6.57
PPP1R35-204ENST00000487452 RB1CC1Q8TDY2 1594 aa56.04■■■■■ 6.56
PPP1R35-204ENST00000487452 MYO15BQ96JP2 1530 aa55.89■■■■■ 6.54
PPP1R35-204ENST00000487452 DCAF1Q9Y4B6 1507 aa55.73■■■■■ 6.51
PPP1R35-204ENST00000487452 UNC13AQ9UPW8 1703 aa54.58■■■■■ 6.33
PPP1R35-204ENST00000487452 SCRIBQ14160 1630 aa54.39■■■■■ 6.3
PPP1R35-204ENST00000487452 PABPN1Q86U42 306 aaKnown RBP eCLIP54.38■■■■■ 6.37e-6■□□□□ 10.4
PPP1R35-204ENST00000487452 BICRAQ9NZM4 1560 aa54.25■■■■■ 6.27
PPP1R35-204ENST00000487452 SHROOM4Q9ULL8 1493 aa53.89■■■■■ 6.22
PPP1R35-204ENST00000487452 DNAJC5BQ9UF47 199 aa53.87■■■■■ 6.21
PPP1R35-204ENST00000487452 EIF4G1Q04637 1599 aaKnown RBP52.84■■■■■ 6.05
PPP1R35-204ENST00000487452 CC2D2AQ9P2K1 1620 aa52.57■■■■■ 6.01
PPP1R35-204ENST00000487452 CECR2Q9BXF3 1484 aa52.31■■■■■ 5.97
PPP1R35-204ENST00000487452 BAZ1AQ9NRL2 1556 aaPredicted RBP52.14■■■■■ 5.94
PPP1R35-204ENST00000487452 SMARCA4P51532 1647 aa52.09■■■■■ 5.93
PPP1R35-204ENST00000487452 ATAD2BQ9ULI0 1458 aa51.8■■■■■ 5.88
PPP1R35-204ENST00000487452 MROH2BQ7Z745 1585 aa51.79■■■■■ 5.88
PPP1R35-204ENST00000487452 SMARCA2P51531 1590 aa51.78■■■■■ 5.88
PPP1R35-204ENST00000487452 NCAPD3P42695 1498 aa51.77■■■■■ 5.88
PPP1R35-204ENST00000487452 PEG3Q9GZU2 1588 aa51.62■■■■■ 5.85
PPP1R35-204ENST00000487452 HMGXB3Q12766 1538 aa51.49■■■■■ 5.83
PPP1R35-204ENST00000487452 BAZ1BQ9UIG0 1483 aaKnown RBP51.39■■■■■ 5.82
PPP1R35-204ENST00000487452 RSF1Q96T23 1441 aaPredicted RBP51.38■■■■■ 5.81
PPP1R35-204ENST00000487452 WIZO95785 1651 aa51.2■■■■■ 5.79
PPP1R35-204ENST00000487452 TOP2AP11388 1531 aaKnown RBP50.77■■■■■ 5.72
PPP1R35-204ENST00000487452 LAMC3Q9Y6N6 1575 aa50.3■■■■■ 5.64
PPP1R35-204ENST00000487452 NESP48681 1621 aa50.3■■■■■ 5.64
PPP1R35-204ENST00000487452 SUPT5HO00267 1087 aaKnown RBP50.3■■■■■ 5.64
PPP1R35-204ENST00000487452 CADPSQ9ULU8 1353 aa50.29■■■■■ 5.64
PPP1R35-204ENST00000487452 CCDC88BA6NC98 1476 aa50.18■■■■■ 5.62
PPP1R35-204ENST00000487452 ERCC6Q03468 1493 aa50.16■■■■■ 5.62
PPP1R35-204ENST00000487452 PDS5BQ9NTI5 1447 aa50.04■■■■■ 5.6
PPP1R35-204ENST00000487452 CFTRP13569 1480 aa50.01■■■■■ 5.6
PPP1R35-204ENST00000487452 CUX2O14529 1486 aa49.72■■■■■ 5.55
PPP1R35-204ENST00000487452 KIF21AQ7Z4S6 1674 aa49.66■■■■■ 5.54
PPP1R35-204ENST00000487452 FANCD2Q9BXW9 1451 aa49.65■■■■■ 5.54
PPP1R35-204ENST00000487452 CEP164Q9UPV0 1460 aa49.57■■■■■ 5.53
PPP1R35-204ENST00000487452 PRDM2Q13029 1718 aa49.51■■■■■ 5.52
PPP1R35-204ENST00000487452 THOC2Q8NI27 1593 aaKnown RBP49.49■■■■■ 5.51
PPP1R35-204ENST00000487452 MRC2Q9UBG0 1479 aa49.44■■■■■ 5.51
PPP1R35-204ENST00000487452 WDR62O43379 1518 aa49.24■■■■■ 5.47
PPP1R35-204ENST00000487452 URB2Q14146 1524 aaKnown RBP49.09■■■■■ 5.45
PPP1R35-204ENST00000487452 ABCC8Q09428 1581 aa49■■■■■ 5.43
PPP1R35-204ENST00000487452 TOPBP1Q92547 1522 aa48.88■■■■■ 5.41
PPP1R35-204ENST00000487452 DNMBPQ6XZF7 1577 aa48.84■■■■■ 5.41
PPP1R35-204ENST00000487452 DNAJC5Q9H3Z4 198 aa48.77■■■■■ 5.4
PPP1R35-204ENST00000487452 CUX1P39880 1505 aa48.58■■■■■ 5.37
PPP1R35-204ENST00000487452 IFT140Q96RY7 1462 aa48.56■■■■■ 5.36
PPP1R35-204ENST00000487452 POLA1P09884 1462 aaPredicted RBP48.48■■■■■ 5.35
PPP1R35-204ENST00000487452 WRNQ14191 1432 aaPredicted RBP eCLIP48.46■■■■■ 5.35
PPP1R35-204ENST00000487452 FGD5Q6ZNL6 1462 aa48.39■■■■■ 5.34
PPP1R35-204ENST00000487452 SOGA1O94964 1423 aa48.34■■■■■ 5.33
PPP1R35-204ENST00000487452 TARBP1Q13395 1621 aaKnown RBP48.27■■■■■ 5.32
PPP1R35-204ENST00000487452 TOP2BQ02880 1626 aa48.26■■■■■ 5.32
PPP1R35-204ENST00000487452 RAD54L2Q9Y4B4 1467 aa48.24■■■■■ 5.31
PPP1R35-204ENST00000487452 BIVM-ERCC5R4GMW8 1640 aa48.21■■■■■ 5.31
PPP1R35-204ENST00000487452 ZNF608Q9ULD9 1512 aaPredicted RBP48.21■■■■■ 5.31
PPP1R35-204ENST00000487452 SYNJ1O43426 1573 aa48.21■■■■■ 5.31
PPP1R35-204ENST00000487452 AQRO60306 1485 aaKnown RBP eCLIP48.02■■■■■ 5.286e-9■■■□□ 15
PPP1R35-204ENST00000487452 WDR97A6NE52 1622 aa48.01■■■■■ 5.28
PPP1R35-204ENST00000487452 EIF4G3O43432 1585 aaKnown RBP48■■■■■ 5.28
PPP1R35-204ENST00000487452 TDRD9Q8NDG6 1382 aaKnown RBP48■■■■■ 5.27
PPP1R35-204ENST00000487452 ABCA10Q8WWZ4 1543 aa47.99■■■■■ 5.27
PPP1R35-204ENST00000487452 GAPVD1Q14C86 1478 aa47.77■■■■■ 5.24
PPP1R35-204ENST00000487452 GRIN2BQ13224 1484 aa47.74■■■■■ 5.23
PPP1R35-204ENST00000487452 ABCA5Q8WWZ7 1642 aa47.69■■■■■ 5.22
PPP1R35-204ENST00000487452 OSCARQ8IYS5 282 aa47.68■■■■■ 5.22
PPP1R35-204ENST00000487452 MAGI1Q96QZ7 1491 aaPredicted RBP47.59■■■■■ 5.21
PPP1R35-204ENST00000487452 SNAPC4Q5SXM2 1469 aa47.57■■■■■ 5.21
PPP1R35-204ENST00000487452 TRIM41Q8WV44 630 aa47.56■■■■■ 5.2
PPP1R35-204ENST00000487452 PBRM1Q86U86 1689 aa47.51■■■■■ 5.2
PPP1R35-204ENST00000487452 KIF27Q86VH2 1401 aa47.47■■■■■ 5.19
PPP1R35-204ENST00000487452 FBLN2P98095 1184 aa47.44■■■■■ 5.18
PPP1R35-204ENST00000487452 ERICH3Q5RHP9 1530 aa47.42■■■■■ 5.18
PPP1R35-204ENST00000487452 CHMP7Q8WUX9 453 aaPredicted RBP47.41■■■■■ 5.18
PPP1R35-204ENST00000487452 SYNJ2O15056 1496 aa47.39■■■■■ 5.18
PPP1R35-204ENST00000487452 CHD1O14646 1710 aa47.3■■■■■ 5.16
PPP1R35-204ENST00000487452 FHAD1B1AJZ9 1412 aa47.26■■■■■ 5.16
PPP1R35-204ENST00000487452 ADAMTS12P58397 1594 aa47.22■■■■■ 5.15
PPP1R35-204ENST00000487452 IGF1RP08069 1367 aa47.22■■■■■ 5.15
PPP1R35-204ENST00000487452 CHIC1Q5VXU3 224 aa47.13■■■■■ 5.14
PPP1R35-204ENST00000487452 GRIN2AQ12879 1464 aa47.09■■■■■ 5.13
PPP1R35-204ENST00000487452 CUL7Q14999 1698 aa47■■■■■ 5.12
PPP1R35-204ENST00000487452 RUSC2Q8N2Y8 1516 aa46.96■■■■■ 5.11
PPP1R35-204ENST00000487452 CARMIL1Q5VZK9 1371 aa46.95■■■■■ 5.11
PPP1R35-204ENST00000487452 RIMBP3CA6NJZ7 1639 aa46.91■■■■■ 5.1
PPP1R35-204ENST00000487452 RIMBP3BA6NNM3 1639 aa46.91■■■■■ 5.1
PPP1R35-204ENST00000487452 RIMBP3Q9UFD9 1639 aa46.91■■■■■ 5.1
PPP1R35-204ENST00000487452 NUP160Q12769 1436 aa46.89■■■■■ 5.1
PPP1R35-204ENST00000487452 CLASP1Q7Z460 1538 aa46.88■■■■■ 5.09
PPP1R35-204ENST00000487452 ARHGEF11O15085 1522 aa46.86■■■■■ 5.09
PPP1R35-204ENST00000487452 EEA1Q15075 1411 aa46.78■■■■■ 5.08
PPP1R35-204ENST00000487452 CEP170Q5SW79 1584 aa46.77■■■■■ 5.08
PPP1R35-204ENST00000487452 RAPGEF2Q9Y4G8 1499 aa46.69■■■■■ 5.06
PPP1R35-204ENST00000487452 CSRNP3Q8WYN3 585 aa46.67■■■■■ 5.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms