RNA–Protein interactions for RNA: ENST00000487389.5

PLSCR1-214, Transcript of phospholipid scramblase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PLSCR1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-214ENST00000487389 NISCHQ9Y2I1 1504 aa33.31■■■□□ 2.92
PLSCR1-214ENST00000487389 CCDC180Q9P1Z9 1646 aa29.48■■■□□ 2.31
PLSCR1-214ENST00000487389 ABCC9O60706 1549 aa29.02■■■□□ 2.24
PLSCR1-214ENST00000487389 ZCCHC6Q5VYS8 1495 aaKnown RBP27.93■■■□□ 2.06
PLSCR1-214ENST00000487389 RB1CC1Q8TDY2 1594 aa27.87■■■□□ 2.05
PLSCR1-214ENST00000487389 NACADO15069 1562 aa27.81■■■□□ 2.04
PLSCR1-214ENST00000487389 DCAF8L2P0C7V8 631 aa27.7■■■□□ 2.03
PLSCR1-214ENST00000487389 DCAF1Q9Y4B6 1507 aa27.63■■■□□ 2.01
PLSCR1-214ENST00000487389 MYO15BQ96JP2 1530 aa27.61■■■□□ 2.01
PLSCR1-214ENST00000487389 UNC13AQ9UPW8 1703 aa27.14■■□□□ 1.94
PLSCR1-214ENST00000487389 PABPN1Q86U42 306 aaKnown RBP eCLIP27.09■■□□□ 1.93
PLSCR1-214ENST00000487389 BICRAQ9NZM4 1560 aa27■■□□□ 1.91
PLSCR1-214ENST00000487389 DNAJC5BQ9UF47 199 aa26.85■■□□□ 1.89
PLSCR1-214ENST00000487389 SCRIBQ14160 1630 aa26.82■■□□□ 1.88
PLSCR1-214ENST00000487389 SHROOM4Q9ULL8 1493 aa26.79■■□□□ 1.88
PLSCR1-214ENST00000487389 EIF4G1Q04637 1599 aaKnown RBP26.31■■□□□ 1.8
PLSCR1-214ENST00000487389 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
PLSCR1-214ENST00000487389 CECR2Q9BXF3 1484 aa26.13■■□□□ 1.77
PLSCR1-214ENST00000487389 BAZ1AQ9NRL2 1556 aaPredicted RBP25.76■■□□□ 1.71
PLSCR1-214ENST00000487389 SMARCA4P51532 1647 aa25.69■■□□□ 1.7
PLSCR1-214ENST00000487389 MROH2BQ7Z745 1585 aa25.68■■□□□ 1.7
PLSCR1-214ENST00000487389 NCAPD3P42695 1498 aa25.68■■□□□ 1.7
PLSCR1-214ENST00000487389 RSF1Q96T23 1441 aaPredicted RBP25.67■■□□□ 1.7
PLSCR1-214ENST00000487389 ATAD2BQ9ULI0 1458 aa25.62■■□□□ 1.69
PLSCR1-214ENST00000487389 SMARCA2P51531 1590 aa25.59■■□□□ 1.69
PLSCR1-214ENST00000487389 SUPT5HO00267 1087 aaKnown RBP25.56■■□□□ 1.68
PLSCR1-214ENST00000487389 HMGXB3Q12766 1538 aa25.5■■□□□ 1.67
PLSCR1-214ENST00000487389 PEG3Q9GZU2 1588 aa25.47■■□□□ 1.67
PLSCR1-214ENST00000487389 WIZO95785 1651 aa25.47■■□□□ 1.67
PLSCR1-214ENST00000487389 BAZ1BQ9UIG0 1483 aaKnown RBP25.39■■□□□ 1.66
PLSCR1-214ENST00000487389 TOP2AP11388 1531 aaKnown RBP25.22■■□□□ 1.63
PLSCR1-214ENST00000487389 ERCC6Q03468 1493 aa25.06■■□□□ 1.6
PLSCR1-214ENST00000487389 NESP48681 1621 aa25.03■■□□□ 1.6
PLSCR1-214ENST00000487389 LAMC3Q9Y6N6 1575 aa25■■□□□ 1.59
PLSCR1-214ENST00000487389 CCDC88BA6NC98 1476 aa24.91■■□□□ 1.58
PLSCR1-214ENST00000487389 CUX2O14529 1486 aa24.91■■□□□ 1.58
PLSCR1-214ENST00000487389 CADPSQ9ULU8 1353 aa24.91■■□□□ 1.58
PLSCR1-214ENST00000487389 PDS5BQ9NTI5 1447 aa24.87■■□□□ 1.57
PLSCR1-214ENST00000487389 CFTRP13569 1480 aa24.71■■□□□ 1.55
PLSCR1-214ENST00000487389 KIF21AQ7Z4S6 1674 aa24.71■■□□□ 1.55
PLSCR1-214ENST00000487389 THOC2Q8NI27 1593 aaKnown RBP24.71■■□□□ 1.55
PLSCR1-214ENST00000487389 FANCD2Q9BXW9 1451 aa24.59■■□□□ 1.53
PLSCR1-214ENST00000487389 MRC2Q9UBG0 1479 aa24.59■■□□□ 1.53
PLSCR1-214ENST00000487389 CEP164Q9UPV0 1460 aa24.58■■□□□ 1.53
PLSCR1-214ENST00000487389 WDR62O43379 1518 aa24.51■■□□□ 1.51
PLSCR1-214ENST00000487389 PRDM2Q13029 1718 aa24.48■■□□□ 1.51
PLSCR1-214ENST00000487389 DNAJC5Q9H3Z4 198 aa24.42■■□□□ 1.5
PLSCR1-214ENST00000487389 CHIC1Q5VXU3 224 aa24.37■■□□□ 1.49
PLSCR1-214ENST00000487389 URB2Q14146 1524 aaKnown RBP24.33■■□□□ 1.49
PLSCR1-214ENST00000487389 ABCC8Q09428 1581 aa24.26■■□□□ 1.47
PLSCR1-214ENST00000487389 WRNQ14191 1432 aaPredicted RBP eCLIP24.17■■□□□ 1.46
PLSCR1-214ENST00000487389 TOPBP1Q92547 1522 aa24.16■■□□□ 1.46
PLSCR1-214ENST00000487389 TRIM41Q8WV44 630 aa24.12■■□□□ 1.45
PLSCR1-214ENST00000487389 DNMBPQ6XZF7 1577 aa24.11■■□□□ 1.45
PLSCR1-214ENST00000487389 SYNJ1O43426 1573 aa24.11■■□□□ 1.45
PLSCR1-214ENST00000487389 AEBP2Q6ZN18 517 aaPredicted RBP24.1■■□□□ 1.45
PLSCR1-214ENST00000487389 IFT140Q96RY7 1462 aa24.09■■□□□ 1.45
PLSCR1-214ENST00000487389 BIVM-ERCC5R4GMW8 1640 aa24.09■■□□□ 1.45
PLSCR1-214ENST00000487389 TOP2BQ02880 1626 aa24.07■■□□□ 1.44
PLSCR1-214ENST00000487389 CUX1P39880 1505 aa24.04■■□□□ 1.44
PLSCR1-214ENST00000487389 ZNF608Q9ULD9 1512 aaPredicted RBP23.95■■□□□ 1.42
PLSCR1-214ENST00000487389 POLA1P09884 1462 aaPredicted RBP23.95■■□□□ 1.42
PLSCR1-214ENST00000487389 TARBP1Q13395 1621 aaKnown RBP23.9■■□□□ 1.42
PLSCR1-214ENST00000487389 SOGA1O94964 1423 aa23.86■■□□□ 1.41
PLSCR1-214ENST00000487389 OSCARQ8IYS5 282 aa23.86■■□□□ 1.41
PLSCR1-214ENST00000487389 FGD5Q6ZNL6 1462 aa23.84■■□□□ 1.41
PLSCR1-214ENST00000487389 EIF4G3O43432 1585 aaKnown RBP23.84■■□□□ 1.41
PLSCR1-214ENST00000487389 RAD54L2Q9Y4B4 1467 aa23.82■■□□□ 1.4
PLSCR1-214ENST00000487389 AQRO60306 1485 aaKnown RBP eCLIP23.81■■□□□ 1.43e-7■■■□□ 16
PLSCR1-214ENST00000487389 WDR97A6NE52 1622 aa23.76■■□□□ 1.39
PLSCR1-214ENST00000487389 TDRD9Q8NDG6 1382 aaKnown RBP23.74■■□□□ 1.39
PLSCR1-214ENST00000487389 EEA1Q15075 1411 aa23.7■■□□□ 1.39
PLSCR1-214ENST00000487389 RUSC2Q8N2Y8 1516 aa23.65■■□□□ 1.38
PLSCR1-214ENST00000487389 ABCA10Q8WWZ4 1543 aa23.65■■□□□ 1.38
PLSCR1-214ENST00000487389 GRIN2BQ13224 1484 aa23.61■■□□□ 1.37
PLSCR1-214ENST00000487389 KIF27Q86VH2 1401 aa23.59■■□□□ 1.37
PLSCR1-214ENST00000487389 GAPVD1Q14C86 1478 aa23.58■■□□□ 1.37
PLSCR1-214ENST00000487389 MAGI1Q96QZ7 1491 aaPredicted RBP23.58■■□□□ 1.37
PLSCR1-214ENST00000487389 FBLN2P98095 1184 aa23.58■■□□□ 1.36
PLSCR1-214ENST00000487389 FAM9AQ8IZU1 332 aaPredicted RBP23.58■■□□□ 1.36
PLSCR1-214ENST00000487389 SNAPC4Q5SXM2 1469 aa23.57■■□□□ 1.36
PLSCR1-214ENST00000487389 CHD1O14646 1710 aa23.55■■□□□ 1.36
PLSCR1-214ENST00000487389 ABCA5Q8WWZ7 1642 aa23.52■■□□□ 1.36
PLSCR1-214ENST00000487389 CHMP7Q8WUX9 453 aaPredicted RBP23.51■■□□□ 1.35
PLSCR1-214ENST00000487389 CSRNP3Q8WYN3 585 aa23.51■■□□□ 1.35
PLSCR1-214ENST00000487389 SYNJ2O15056 1496 aa23.49■■□□□ 1.35
PLSCR1-214ENST00000487389 PBRM1Q86U86 1689 aa23.47■■□□□ 1.35
PLSCR1-214ENST00000487389 KIF21BO75037 1637 aa23.43■■□□□ 1.34
PLSCR1-214ENST00000487389 ARHGEF11O15085 1522 aa23.41■■□□□ 1.34
PLSCR1-214ENST00000487389 RIMBP3CA6NJZ7 1639 aa23.41■■□□□ 1.34
PLSCR1-214ENST00000487389 RIMBP3BA6NNM3 1639 aa23.41■■□□□ 1.34
PLSCR1-214ENST00000487389 RIMBP3Q9UFD9 1639 aa23.41■■□□□ 1.34
PLSCR1-214ENST00000487389 IGF1RP08069 1367 aa23.4■■□□□ 1.34
PLSCR1-214ENST00000487389 ERICH3Q5RHP9 1530 aa23.38■■□□□ 1.33
PLSCR1-214ENST00000487389 PRXQ9BXM0 1461 aa23.38■■□□□ 1.33
PLSCR1-214ENST00000487389 LOC105371045A0A1W2PR82 267 aa23.35■■□□□ 1.33
PLSCR1-214ENST00000487389 CUL7Q14999 1698 aa23.35■■□□□ 1.33
PLSCR1-214ENST00000487389 CLASP1Q7Z460 1538 aa23.35■■□□□ 1.33
PLSCR1-214ENST00000487389 GOLGA3Q08378 1498 aa23.32■■□□□ 1.32
PLSCR1-214ENST00000487389 FHAD1B1AJZ9 1412 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms