RNA–Protein interactions for RNA: ENST00000487376.5

FLOT1-212, Transcript of flotillin 1, humanhuman

TSL 5

Gene FLOT1, Length 1,583 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-212ENST00000487376 NISCHQ9Y2I1 1504 aa43.88■■■■■ 4.61
FLOT1-212ENST00000487376 CCDC180Q9P1Z9 1646 aa38.6■■■■□ 3.77
FLOT1-212ENST00000487376 ZCCHC6Q5VYS8 1495 aaKnown RBP36.79■■■■□ 3.48
FLOT1-212ENST00000487376 ABCC9O60706 1549 aa36.78■■■■□ 3.48
FLOT1-212ENST00000487376 DCAF1Q9Y4B6 1507 aa36.32■■■■□ 3.4
FLOT1-212ENST00000487376 DCAF8L2P0C7V8 631 aa36.16■■■■□ 3.38
FLOT1-212ENST00000487376 MYO15BQ96JP2 1530 aa36.07■■■■□ 3.36
FLOT1-212ENST00000487376 NACADO15069 1562 aa35.98■■■■□ 3.35
FLOT1-212ENST00000487376 RB1CC1Q8TDY2 1594 aa35.79■■■■□ 3.32
FLOT1-212ENST00000487376 SCRIBQ14160 1630 aa35.35■■■■□ 3.25
FLOT1-212ENST00000487376 SHROOM4Q9ULL8 1493 aa35.32■■■■□ 3.25
FLOT1-212ENST00000487376 UNC13AQ9UPW8 1703 aa35.2■■■■□ 3.23
FLOT1-212ENST00000487376 BICRAQ9NZM4 1560 aa34.77■■■■□ 3.16
FLOT1-212ENST00000487376 PABPN1Q86U42 306 aaKnown RBP eCLIP34.5■■■■□ 3.113e-6■■□□□ 12.9
FLOT1-212ENST00000487376 CECR2Q9BXF3 1484 aa34.11■■■■□ 3.05
FLOT1-212ENST00000487376 BAZ1AQ9NRL2 1556 aaPredicted RBP33.92■■■■□ 3.02
FLOT1-212ENST00000487376 MROH2BQ7Z745 1585 aa33.88■■■■□ 3.01
FLOT1-212ENST00000487376 SMARCA4P51532 1647 aa33.88■■■■□ 3.01
FLOT1-212ENST00000487376 RSF1Q96T23 1441 aaPredicted RBP33.81■■■■□ 3
FLOT1-212ENST00000487376 EIF4G1Q04637 1599 aaKnown RBP33.72■■■□□ 2.99
FLOT1-212ENST00000487376 SUPT5HO00267 1087 aaKnown RBP33.68■■■□□ 2.98
FLOT1-212ENST00000487376 WIZO95785 1651 aa33.62■■■□□ 2.97
FLOT1-212ENST00000487376 PEG3Q9GZU2 1588 aa33.5■■■□□ 2.95
FLOT1-212ENST00000487376 ATAD2BQ9ULI0 1458 aa33.38■■■□□ 2.93
FLOT1-212ENST00000487376 SMARCA2P51531 1590 aa33.37■■■□□ 2.93
FLOT1-212ENST00000487376 CC2D2AQ9P2K1 1620 aa33.35■■■□□ 2.93
FLOT1-212ENST00000487376 TOP2AP11388 1531 aaKnown RBP33.25■■■□□ 2.91
FLOT1-212ENST00000487376 NCAPD3P42695 1498 aa33.16■■■□□ 2.9
FLOT1-212ENST00000487376 BAZ1BQ9UIG0 1483 aaKnown RBP33.15■■■□□ 2.9
FLOT1-212ENST00000487376 HMGXB3Q12766 1538 aa33.15■■■□□ 2.9
FLOT1-212ENST00000487376 DNAJC5BQ9UF47 199 aa32.83■■■□□ 2.85
FLOT1-212ENST00000487376 CCDC88BA6NC98 1476 aa32.83■■■□□ 2.85
FLOT1-212ENST00000487376 CFTRP13569 1480 aa32.31■■■□□ 2.76
FLOT1-212ENST00000487376 PRDM2Q13029 1718 aa32.3■■■□□ 2.76
FLOT1-212ENST00000487376 CADPSQ9ULU8 1353 aa32.24■■■□□ 2.75
FLOT1-212ENST00000487376 NESP48681 1621 aa32.17■■■□□ 2.74
FLOT1-212ENST00000487376 LAMC3Q9Y6N6 1575 aa32.17■■■□□ 2.74
FLOT1-212ENST00000487376 CHIC1Q5VXU3 224 aa32.04■■■□□ 2.72
FLOT1-212ENST00000487376 ABCC8Q09428 1581 aa32.03■■■□□ 2.72
FLOT1-212ENST00000487376 FANCD2Q9BXW9 1451 aa31.92■■■□□ 2.7
FLOT1-212ENST00000487376 KIF21AQ7Z4S6 1674 aa31.89■■■□□ 2.7
FLOT1-212ENST00000487376 PDS5BQ9NTI5 1447 aa31.84■■■□□ 2.69
FLOT1-212ENST00000487376 WRNQ14191 1432 aaPredicted RBP eCLIP31.83■■■□□ 2.69
FLOT1-212ENST00000487376 SYNJ1O43426 1573 aa31.8■■■□□ 2.68
FLOT1-212ENST00000487376 CEP164Q9UPV0 1460 aa31.78■■■□□ 2.68
FLOT1-212ENST00000487376 BIVM-ERCC5R4GMW8 1640 aa31.73■■■□□ 2.67
FLOT1-212ENST00000487376 CUX1P39880 1505 aa31.73■■■□□ 2.67
FLOT1-212ENST00000487376 TRIM41Q8WV44 630 aa31.71■■■□□ 2.67
FLOT1-212ENST00000487376 TOP2BQ02880 1626 aa31.71■■■□□ 2.67
FLOT1-212ENST00000487376 DNMBPQ6XZF7 1577 aa31.61■■■□□ 2.65
FLOT1-212ENST00000487376 URB2Q14146 1524 aaKnown RBP31.59■■■□□ 2.65
FLOT1-212ENST00000487376 ERCC6Q03468 1493 aa31.57■■■□□ 2.64
FLOT1-212ENST00000487376 TOPBP1Q92547 1522 aa31.55■■■□□ 2.64
FLOT1-212ENST00000487376 MRC2Q9UBG0 1479 aa31.52■■■□□ 2.64
FLOT1-212ENST00000487376 THOC2Q8NI27 1593 aaKnown RBP31.49■■■□□ 2.63
FLOT1-212ENST00000487376 FGD5Q6ZNL6 1462 aa31.43■■■□□ 2.62
FLOT1-212ENST00000487376 WDR62O43379 1518 aa31.42■■■□□ 2.62
FLOT1-212ENST00000487376 POLA1P09884 1462 aaPredicted RBP31.36■■■□□ 2.61
FLOT1-212ENST00000487376 SOGA1O94964 1423 aa31.26■■■□□ 2.59
FLOT1-212ENST00000487376 WDR97A6NE52 1622 aa31.22■■■□□ 2.59
FLOT1-212ENST00000487376 RAD54L2Q9Y4B4 1467 aa31.22■■■□□ 2.59
FLOT1-212ENST00000487376 RUSC2Q8N2Y8 1516 aa31.2■■■□□ 2.59
FLOT1-212ENST00000487376 CUX2O14529 1486 aa31.17■■■□□ 2.58
FLOT1-212ENST00000487376 TARBP1Q13395 1621 aaKnown RBP31.17■■■□□ 2.58
FLOT1-212ENST00000487376 ABCA10Q8WWZ4 1543 aa31.15■■■□□ 2.58
FLOT1-212ENST00000487376 FAM9AQ8IZU1 332 aaPredicted RBP31.11■■■□□ 2.57
FLOT1-212ENST00000487376 EEA1Q15075 1411 aa31.1■■■□□ 2.57
FLOT1-212ENST00000487376 KIF27Q86VH2 1401 aa31.04■■■□□ 2.56
FLOT1-212ENST00000487376 IFT140Q96RY7 1462 aa31.04■■■□□ 2.56
FLOT1-212ENST00000487376 ABCA5Q8WWZ7 1642 aa31.01■■■□□ 2.55
FLOT1-212ENST00000487376 TDRD9Q8NDG6 1382 aaKnown RBP30.91■■■□□ 2.54
FLOT1-212ENST00000487376 CSRNP3Q8WYN3 585 aa30.91■■■□□ 2.54
FLOT1-212ENST00000487376 ZNF608Q9ULD9 1512 aaPredicted RBP30.9■■■□□ 2.54
FLOT1-212ENST00000487376 GAPVD1Q14C86 1478 aa30.87■■■□□ 2.53
FLOT1-212ENST00000487376 PBRM1Q86U86 1689 aa30.87■■■□□ 2.53
FLOT1-212ENST00000487376 EIF4G3O43432 1585 aaKnown RBP30.86■■■□□ 2.53
FLOT1-212ENST00000487376 KIF21BO75037 1637 aa30.82■■■□□ 2.52
FLOT1-212ENST00000487376 AQRO60306 1485 aaKnown RBP eCLIP30.82■■■□□ 2.524e-7■■■■■ 41
FLOT1-212ENST00000487376 IGF1RP08069 1367 aa30.81■■■□□ 2.52
FLOT1-212ENST00000487376 ERICH3Q5RHP9 1530 aa30.79■■■□□ 2.52
FLOT1-212ENST00000487376 LOC105371045A0A1W2PR82 267 aa30.76■■■□□ 2.52
FLOT1-212ENST00000487376 PRXQ9BXM0 1461 aa30.76■■■□□ 2.51
FLOT1-212ENST00000487376 CUL7Q14999 1698 aa30.74■■■□□ 2.51
FLOT1-212ENST00000487376 GRIN2BQ13224 1484 aa30.71■■■□□ 2.51
FLOT1-212ENST00000487376 GOLGA3Q08378 1498 aa30.67■■■□□ 2.5
FLOT1-212ENST00000487376 RAPGEF2Q9Y4G8 1499 aa30.67■■■□□ 2.5
FLOT1-212ENST00000487376 EHMT2Q96KQ7 1210 aa30.66■■■□□ 2.5
FLOT1-212ENST00000487376 CARMIL1Q5VZK9 1371 aa30.64■■■□□ 2.5
FLOT1-212ENST00000487376 ADAMTS12P58397 1594 aa30.62■■■□□ 2.49
FLOT1-212ENST00000487376 SNAPC4Q5SXM2 1469 aa30.58■■■□□ 2.49
FLOT1-212ENST00000487376 MAGI1Q96QZ7 1491 aaPredicted RBP30.52■■■□□ 2.48
FLOT1-212ENST00000487376 FHAD1B1AJZ9 1412 aa30.52■■■□□ 2.48
FLOT1-212ENST00000487376 TNIKQ9UKE5 1360 aa30.45■■■□□ 2.46
FLOT1-212ENST00000487376 UBTFP17480 764 aaKnown RBP30.43■■■□□ 2.46
FLOT1-212ENST00000487376 SYNJ2O15056 1496 aa30.4■■■□□ 2.46
FLOT1-212ENST00000487376 CTTNBP2Q8WZ74 1663 aa30.39■■■□□ 2.45
FLOT1-212ENST00000487376 GRIN2AQ12879 1464 aa30.34■■■□□ 2.45
FLOT1-212ENST00000487376 CHD1O14646 1710 aa30.32■■■□□ 2.44
FLOT1-212ENST00000487376 CEP162Q5TB80 1403 aa30.27■■■□□ 2.44
FLOT1-212ENST00000487376 CHMP7Q8WUX9 453 aaPredicted RBP30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms