RNA–Protein interactions for RNA: ENST00000487281.1

HM13-218, Transcript of histocompatibility minor 13, humanhuman

TSL 3

Gene HM13, Length 757 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-218ENST00000487281 NISCHQ9Y2I1 1504 aa36.95■■■■□ 3.5
HM13-218ENST00000487281 CCDC180Q9P1Z9 1646 aa32.69■■■□□ 2.82
HM13-218ENST00000487281 ABCC9O60706 1549 aa32.6■■■□□ 2.81
HM13-218ENST00000487281 DNAJC5BQ9UF47 199 aa30.9■■■□□ 2.54
HM13-218ENST00000487281 RB1CC1Q8TDY2 1594 aa30.88■■■□□ 2.53
HM13-218ENST00000487281 ZCCHC6Q5VYS8 1495 aaKnown RBP30.82■■■□□ 2.52
HM13-218ENST00000487281 DCAF8L2P0C7V8 631 aa30.79■■■□□ 2.52
HM13-218ENST00000487281 NACADO15069 1562 aa30.75■■■□□ 2.51
HM13-218ENST00000487281 MYO15BQ96JP2 1530 aa30.68■■■□□ 2.5
HM13-218ENST00000487281 DCAF1Q9Y4B6 1507 aa30.61■■■□□ 2.49
HM13-218ENST00000487281 PABPN1Q86U42 306 aaKnown RBP eCLIP30.29■■■□□ 2.44
HM13-218ENST00000487281 UNC13AQ9UPW8 1703 aa30.21■■■□□ 2.43
HM13-218ENST00000487281 BICRAQ9NZM4 1560 aa30.01■■■□□ 2.39
HM13-218ENST00000487281 SCRIBQ14160 1630 aa29.82■■■□□ 2.36
HM13-218ENST00000487281 SHROOM4Q9ULL8 1493 aa29.55■■■□□ 2.32
HM13-218ENST00000487281 CC2D2AQ9P2K1 1620 aa29.44■■■□□ 2.3
HM13-218ENST00000487281 CECR2Q9BXF3 1484 aa29.41■■■□□ 2.3
HM13-218ENST00000487281 EIF4G1Q04637 1599 aaKnown RBP29.29■■■□□ 2.28
HM13-218ENST00000487281 DNAJC5Q9H3Z4 198 aa28.62■■■□□ 2.17
HM13-218ENST00000487281 BAZ1AQ9NRL2 1556 aaPredicted RBP28.61■■■□□ 2.17
HM13-218ENST00000487281 SMARCA4P51532 1647 aa28.58■■■□□ 2.17
HM13-218ENST00000487281 MROH2BQ7Z745 1585 aa28.46■■■□□ 2.15
HM13-218ENST00000487281 ATAD2BQ9ULI0 1458 aa28.43■■■□□ 2.14
HM13-218ENST00000487281 NCAPD3P42695 1498 aa28.41■■■□□ 2.14
HM13-218ENST00000487281 SMARCA2P51531 1590 aa28.39■■■□□ 2.14
HM13-218ENST00000487281 PEG3Q9GZU2 1588 aa28.34■■■□□ 2.13
HM13-218ENST00000487281 RSF1Q96T23 1441 aaPredicted RBP28.26■■■□□ 2.11
HM13-218ENST00000487281 HMGXB3Q12766 1538 aa28.24■■■□□ 2.11
HM13-218ENST00000487281 CUX2O14529 1486 aa28.24■■■□□ 2.11
HM13-218ENST00000487281 BAZ1BQ9UIG0 1483 aaKnown RBP28.18■■■□□ 2.1
HM13-218ENST00000487281 ERCC6Q03468 1493 aa28.16■■■□□ 2.1
HM13-218ENST00000487281 WIZO95785 1651 aa28.1■■■□□ 2.09
HM13-218ENST00000487281 NESP48681 1621 aa27.91■■■□□ 2.06
HM13-218ENST00000487281 TOP2AP11388 1531 aaKnown RBP27.87■■■□□ 2.05
HM13-218ENST00000487281 THOC2Q8NI27 1593 aaKnown RBP27.71■■■□□ 2.03
HM13-218ENST00000487281 LAMC3Q9Y6N6 1575 aa27.66■■■□□ 2.02
HM13-218ENST00000487281 SUPT5HO00267 1087 aaKnown RBP27.66■■■□□ 2.02
HM13-218ENST00000487281 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
HM13-218ENST00000487281 CCDC88BA6NC98 1476 aa27.57■■■□□ 2
HM13-218ENST00000487281 KIF21AQ7Z4S6 1674 aa27.56■■■□□ 2
HM13-218ENST00000487281 PDS5BQ9NTI5 1447 aa27.5■■□□□ 1.99
HM13-218ENST00000487281 CFTRP13569 1480 aa27.47■■□□□ 1.99
HM13-218ENST00000487281 MRC2Q9UBG0 1479 aa27.3■■□□□ 1.96
HM13-218ENST00000487281 WDR62O43379 1518 aa27.25■■□□□ 1.95
HM13-218ENST00000487281 FANCD2Q9BXW9 1451 aa27.24■■□□□ 1.95
HM13-218ENST00000487281 TRIM41Q8WV44 630 aa27.22■■□□□ 1.95
HM13-218ENST00000487281 CEP164Q9UPV0 1460 aa27.17■■□□□ 1.94
HM13-218ENST00000487281 PRDM2Q13029 1718 aa27.09■■□□□ 1.93
HM13-218ENST00000487281 URB2Q14146 1524 aaKnown RBP26.95■■□□□ 1.9
HM13-218ENST00000487281 OSCARQ8IYS5 282 aa26.89■■□□□ 1.9
HM13-218ENST00000487281 ABCC8Q09428 1581 aa26.86■■□□□ 1.89
HM13-218ENST00000487281 TOPBP1Q92547 1522 aa26.81■■□□□ 1.88
HM13-218ENST00000487281 DNMBPQ6XZF7 1577 aa26.79■■□□□ 1.88
HM13-218ENST00000487281 CUX1P39880 1505 aa26.68■■□□□ 1.86
HM13-218ENST00000487281 IFT140Q96RY7 1462 aa26.62■■□□□ 1.85
HM13-218ENST00000487281 WRNQ14191 1432 aaPredicted RBP eCLIP26.62■■□□□ 1.85
HM13-218ENST00000487281 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
HM13-218ENST00000487281 RIMBP3CA6NJZ7 1639 aa26.6■■□□□ 1.85
HM13-218ENST00000487281 RIMBP3BA6NNM3 1639 aa26.6■■□□□ 1.85
HM13-218ENST00000487281 RIMBP3Q9UFD9 1639 aa26.6■■□□□ 1.85
HM13-218ENST00000487281 ZNF608Q9ULD9 1512 aaPredicted RBP26.59■■□□□ 1.85
HM13-218ENST00000487281 FGD5Q6ZNL6 1462 aa26.56■■□□□ 1.84
HM13-218ENST00000487281 SOGA1O94964 1423 aa26.53■■□□□ 1.84
HM13-218ENST00000487281 TOP2BQ02880 1626 aa26.5■■□□□ 1.83
HM13-218ENST00000487281 TARBP1Q13395 1621 aaKnown RBP26.49■■□□□ 1.83
HM13-218ENST00000487281 RAD54L2Q9Y4B4 1467 aa26.49■■□□□ 1.83
HM13-218ENST00000487281 SYNJ1O43426 1573 aa26.48■■□□□ 1.83
HM13-218ENST00000487281 ARHGEF11O15085 1522 aa26.47■■□□□ 1.83
HM13-218ENST00000487281 BIVM-ERCC5R4GMW8 1640 aa26.47■■□□□ 1.83
HM13-218ENST00000487281 EIF4G3O43432 1585 aaKnown RBP26.42■■□□□ 1.82
HM13-218ENST00000487281 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.815e-11■■■■□ 20.5
HM13-218ENST00000487281 TDRD9Q8NDG6 1382 aaKnown RBP26.35■■□□□ 1.81
HM13-218ENST00000487281 ABCA10Q8WWZ4 1543 aa26.34■■□□□ 1.81
HM13-218ENST00000487281 WDR97A6NE52 1622 aa26.31■■□□□ 1.8
HM13-218ENST00000487281 CHD1O14646 1710 aa26.3■■□□□ 1.8
HM13-218ENST00000487281 CYB5RLQ6IPT4 315 aa26.29■■□□□ 1.8
HM13-218ENST00000487281 GAPVD1Q14C86 1478 aa26.21■■□□□ 1.79
HM13-218ENST00000487281 GRIN2BQ13224 1484 aa26.18■■□□□ 1.78
HM13-218ENST00000487281 ARAP1Q96P48 1450 aa26.18■■□□□ 1.78
HM13-218ENST00000487281 FBLN2P98095 1184 aa26.18■■□□□ 1.78
HM13-218ENST00000487281 ABCA5Q8WWZ7 1642 aa26.16■■□□□ 1.78
HM13-218ENST00000487281 TRHP20396 242 aaPredicted RBP26.1■■□□□ 1.77
HM13-218ENST00000487281 SNAPC4Q5SXM2 1469 aa26.09■■□□□ 1.77
HM13-218ENST00000487281 MAGI1Q96QZ7 1491 aaPredicted RBP26.09■■□□□ 1.77
HM13-218ENST00000487281 KIF27Q86VH2 1401 aa26.06■■□□□ 1.76
HM13-218ENST00000487281 ERICH3Q5RHP9 1530 aa26.02■■□□□ 1.76
HM13-218ENST00000487281 PBRM1Q86U86 1689 aa26.02■■□□□ 1.76
HM13-218ENST00000487281 SYNJ2O15056 1496 aa25.99■■□□□ 1.75
HM13-218ENST00000487281 CHMP7Q8WUX9 453 aaPredicted RBP25.99■■□□□ 1.75
HM13-218ENST00000487281 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
HM13-218ENST00000487281 CHIC1Q5VXU3 224 aa25.97■■□□□ 1.75
HM13-218ENST00000487281 IGF1RP08069 1367 aa25.95■■□□□ 1.75
HM13-218ENST00000487281 FHAD1B1AJZ9 1412 aa25.94■■□□□ 1.74
HM13-218ENST00000487281 ADAMTS12P58397 1594 aa25.9■■□□□ 1.74
HM13-218ENST00000487281 RUSC2Q8N2Y8 1516 aa25.84■■□□□ 1.73
HM13-218ENST00000487281 GRIN2AQ12879 1464 aa25.84■■□□□ 1.73
HM13-218ENST00000487281 CARMIL1Q5VZK9 1371 aa25.79■■□□□ 1.72
HM13-218ENST00000487281 CUL7Q14999 1698 aa25.77■■□□□ 1.72
HM13-218ENST00000487281 NUP160Q12769 1436 aa25.74■■□□□ 1.71
HM13-218ENST00000487281 EEA1Q15075 1411 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms