RNA–Protein interactions for RNA: ENST00000487186.5

FAAP20-213, Transcript of FA core complex associated protein 20, humanhuman

TSL 2

Gene FAAP20, Length 3,576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-213ENST00000487186 NISCHQ9Y2I1 1504 aa26.26■■□□□ 1.79
FAAP20-213ENST00000487186 DCAF8L2P0C7V8 631 aa23.97■■□□□ 1.43
FAAP20-213ENST00000487186 SHROOM4Q9ULL8 1493 aa23.75■■□□□ 1.39
FAAP20-213ENST00000487186 PELP1Q8IZL8 1130 aaKnown RBP23.58■■□□□ 1.36
FAAP20-213ENST00000487186 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
FAAP20-213ENST00000487186 MYT1Q01538 1121 aa23.03■■□□□ 1.28
FAAP20-213ENST00000487186 HRCP23327 699 aa22.59■■□□□ 1.21
FAAP20-213ENST00000487186 PPARGC1BQ86YN6 1023 aaKnown RBP22.26■■□□□ 1.15
FAAP20-213ENST00000487186 EHMT2Q96KQ7 1210 aa22.15■■□□□ 1.14
FAAP20-213ENST00000487186 PCGF6Q9BYE7 350 aa21.99■■□□□ 1.11
FAAP20-213ENST00000487186 ZCCHC6Q5VYS8 1495 aaKnown RBP21.98■■□□□ 1.11
FAAP20-213ENST00000487186 ABCC9O60706 1549 aa21.97■■□□□ 1.11
FAAP20-213ENST00000487186 SCAF1Q9H7N4 1312 aaKnown RBP21.95■■□□□ 1.1
FAAP20-213ENST00000487186 CCDC180Q9P1Z9 1646 aa21.8■■□□□ 1.08
FAAP20-213ENST00000487186 FAM9AQ8IZU1 332 aaPredicted RBP21.78■■□□□ 1.08
FAAP20-213ENST00000487186 TTBK1Q5TCY1 1321 aaPredicted RBP21.75■■□□□ 1.07
FAAP20-213ENST00000487186 CHIC1Q5VXU3 224 aa21.68■■□□□ 1.06
FAAP20-213ENST00000487186 LOC105371045A0A1W2PR82 267 aa21.58■■□□□ 1.05
FAAP20-213ENST00000487186 SCRIBQ14160 1630 aa21.47■■□□□ 1.03
FAAP20-213ENST00000487186 PABPN1Q86U42 306 aaKnown RBP eCLIP21.42■■□□□ 1.02
FAAP20-213ENST00000487186 BCL11AQ9H165 835 aa21.33■■□□□ 1.01
FAAP20-213ENST00000487186 TRIM41Q8WV44 630 aa21.32■■□□□ 1
FAAP20-213ENST00000487186 CENPBP07199 599 aaPredicted RBP21.27■■□□□ 1
FAAP20-213ENST00000487186 MYO15BQ96JP2 1530 aa21.26■□□□□ 0.99
FAAP20-213ENST00000487186 GTF3C3Q9Y5Q9 886 aa21.25■□□□□ 0.99
FAAP20-213ENST00000487186 PRKCSHP14314 528 aaPredicted RBP21.21■□□□□ 0.99
FAAP20-213ENST00000487186 ACIN1Q9UKV3 1341 aaKnown RBP21.21■□□□□ 0.99
FAAP20-213ENST00000487186 NEUROD1Q13562 356 aa21.08■□□□□ 0.97
FAAP20-213ENST00000487186 ZEB1P37275 1124 aaPredicted RBP21.04■□□□□ 0.96
FAAP20-213ENST00000487186 RANGAP1P46060 587 aaPredicted RBP21■□□□□ 0.95
FAAP20-213ENST00000487186 ERICH6Q7L0X2 663 aa20.98■□□□□ 0.95
FAAP20-213ENST00000487186 CECR2Q9BXF3 1484 aa20.96■□□□□ 0.95
FAAP20-213ENST00000487186 RSF1Q96T23 1441 aaPredicted RBP20.93■□□□□ 0.94
FAAP20-213ENST00000487186 DCAF1Q9Y4B6 1507 aa20.87■□□□□ 0.93
FAAP20-213ENST00000487186 TRIM26Q12899 539 aaPredicted RBP20.76■□□□□ 0.91
FAAP20-213ENST00000487186 RB1CC1Q8TDY2 1594 aa20.67■□□□□ 0.9
FAAP20-213ENST00000487186 MROH2BQ7Z745 1585 aa20.65■□□□□ 0.9
FAAP20-213ENST00000487186 UBTFP17480 764 aaKnown RBP20.63■□□□□ 0.89
FAAP20-213ENST00000487186 ANP32EQ9BTT0 268 aa20.62■□□□□ 0.89
FAAP20-213ENST00000487186 NACADO15069 1562 aa20.6■□□□□ 0.89
FAAP20-213ENST00000487186 YTHDC1Q96MU7 727 aaKnown RBP20.59■□□□□ 0.89
FAAP20-213ENST00000487186 WIZO95785 1651 aa20.48■□□□□ 0.87
FAAP20-213ENST00000487186 DIEXFQ68CQ4 756 aaKnown RBP20.44■□□□□ 0.86
FAAP20-213ENST00000487186 CSRNP3Q8WYN3 585 aa20.44■□□□□ 0.86
FAAP20-213ENST00000487186 APLP2Q06481 763 aa20.32■□□□□ 0.84
FAAP20-213ENST00000487186 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.26■□□□□ 0.83
FAAP20-213ENST00000487186 ABCC8Q09428 1581 aa20.25■□□□□ 0.83
FAAP20-213ENST00000487186 CCER1Q8TC90 406 aaPredicted RBP20.19■□□□□ 0.82
FAAP20-213ENST00000487186 BAZ1AQ9NRL2 1556 aaPredicted RBP20.18■□□□□ 0.82
FAAP20-213ENST00000487186 CCDC88BA6NC98 1476 aa20.15■□□□□ 0.82
FAAP20-213ENST00000487186 ATP1B4Q9UN42 357 aaPredicted RBP20.13■□□□□ 0.81
FAAP20-213ENST00000487186 HNRNPUL2Q1KMD3 747 aaKnown RBP20.1■□□□□ 0.81
FAAP20-213ENST00000487186 SOGA1O94964 1423 aa20.1■□□□□ 0.81
FAAP20-213ENST00000487186 ITGAEP38570 1179 aa19.99■□□□□ 0.79
FAAP20-213ENST00000487186 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
FAAP20-213ENST00000487186 RUSC2Q8N2Y8 1516 aa19.98■□□□□ 0.79
FAAP20-213ENST00000487186 TSHZ2Q9NRE2 1034 aa19.95■□□□□ 0.78
FAAP20-213ENST00000487186 BAZ1BQ9UIG0 1483 aaKnown RBP19.93■□□□□ 0.78
FAAP20-213ENST00000487186 ANO8Q9HCE9 1232 aaPredicted RBP19.93■□□□□ 0.78
FAAP20-213ENST00000487186 P3H3Q8IVL6 736 aa19.88■□□□□ 0.77
FAAP20-213ENST00000487186 WRNQ14191 1432 aaPredicted RBP eCLIP19.87■□□□□ 0.77
FAAP20-213ENST00000487186 TOP2AP11388 1531 aaKnown RBP19.86■□□□□ 0.77
FAAP20-213ENST00000487186 UNC13AQ9UPW8 1703 aa19.85■□□□□ 0.77
FAAP20-213ENST00000487186 BICRAQ9NZM4 1560 aa19.82■□□□□ 0.76
FAAP20-213ENST00000487186 SMARCA2P51531 1590 aa19.81■□□□□ 0.76
FAAP20-213ENST00000487186 SUPT16HQ9Y5B9 1047 aaKnown RBP19.79■□□□□ 0.76
FAAP20-213ENST00000487186 ATAD2BQ9ULI0 1458 aa19.78■□□□□ 0.76
FAAP20-213ENST00000487186 CEP162Q5TB80 1403 aa19.77■□□□□ 0.76
FAAP20-213ENST00000487186 BCANQ96GW7 911 aa19.7■□□□□ 0.74
FAAP20-213ENST00000487186 MIER1Q8N108 512 aa19.7■□□□□ 0.74
FAAP20-213ENST00000487186 CCDC136Q96JN2 1154 aa19.7■□□□□ 0.74
FAAP20-213ENST00000487186 ZNF316A6NFI3 1004 aaPredicted RBP19.69■□□□□ 0.74
FAAP20-213ENST00000487186 ARID3CA6NKF2 412 aa19.67■□□□□ 0.74
FAAP20-213ENST00000487186 EIF5BO60841 1220 aaKnown RBP19.67■□□□□ 0.74
FAAP20-213ENST00000487186 SLC24A1O60721 1099 aa19.64■□□□□ 0.74
FAAP20-213ENST00000487186 CLSPNQ9HAW4 1339 aa19.64■□□□□ 0.73
FAAP20-213ENST00000487186 DNAJC5BQ9UF47 199 aa19.64■□□□□ 0.73
FAAP20-213ENST00000487186 SALL2Q9Y467 1007 aaPredicted RBP19.57■□□□□ 0.72
FAAP20-213ENST00000487186 CLIP1P30622 1438 aa19.56■□□□□ 0.72
FAAP20-213ENST00000487186 DEKP35659 375 aaKnown RBP19.52■□□□□ 0.71
FAAP20-213ENST00000487186 TNIKQ9UKE5 1360 aa19.51■□□□□ 0.71
FAAP20-213ENST00000487186 GOLGA3Q08378 1498 aa19.51■□□□□ 0.71
FAAP20-213ENST00000487186 RBM19Q9Y4C8 960 aaKnown RBP19.5■□□□□ 0.71
FAAP20-213ENST00000487186 RAPGEF2Q9Y4G8 1499 aa19.49■□□□□ 0.71
FAAP20-213ENST00000487186 UBE2Q2Q8WVN8 375 aa19.48■□□□□ 0.71
FAAP20-213ENST00000487186 SYNJ1O43426 1573 aa19.48■□□□□ 0.71
FAAP20-213ENST00000487186 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.48■□□□□ 0.71
FAAP20-213ENST00000487186 FAM50AQ14320 339 aaKnown RBP19.47■□□□□ 0.71
FAAP20-213ENST00000487186 MYT1LQ9UL68 1186 aa19.46■□□□□ 0.71
FAAP20-213ENST00000487186 EIF4G1Q04637 1599 aaKnown RBP19.45■□□□□ 0.7
FAAP20-213ENST00000487186 KANK4Q5T7N3 995 aaPredicted RBP19.42■□□□□ 0.7
FAAP20-213ENST00000487186 FBLN2P98095 1184 aa19.39■□□□□ 0.69
FAAP20-213ENST00000487186 NEFLP07196 543 aa19.38■□□□□ 0.69
FAAP20-213ENST00000487186 RTN4Q9NQC3 1192 aaKnown RBP19.38■□□□□ 0.69
FAAP20-213ENST00000487186 CEP164Q9UPV0 1460 aa19.38■□□□□ 0.69
FAAP20-213ENST00000487186 CUX2O14529 1486 aa19.34■□□□□ 0.69
FAAP20-213ENST00000487186 EEA1Q15075 1411 aa19.34■□□□□ 0.69
FAAP20-213ENST00000487186 FKBP8Q14318 412 aa19.32■□□□□ 0.68
FAAP20-213ENST00000487186 KIF27Q86VH2 1401 aa19.29■□□□□ 0.68
FAAP20-213ENST00000487186 NESP48681 1621 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms