RNA–Protein interactions for RNA: ENST00000487089.1

PRRC2A-212, Transcript of proline rich coiled-coil 2A, humanhuman

TSL 2

Gene PRRC2A, Length 732 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2A-212ENST00000487089 NISCHQ9Y2I1 1504 aa20.88■□□□□ 0.93
PRRC2A-212ENST00000487089 CCDC180Q9P1Z9 1646 aa18.71■□□□□ 0.58
PRRC2A-212ENST00000487089 ABCC9O60706 1549 aa18.56■□□□□ 0.56
PRRC2A-212ENST00000487089 RB1CC1Q8TDY2 1594 aa17.81■□□□□ 0.44
PRRC2A-212ENST00000487089 NACADO15069 1562 aa17.75■□□□□ 0.43
PRRC2A-212ENST00000487089 MYO15BQ96JP2 1530 aa17.62■□□□□ 0.41
PRRC2A-212ENST00000487089 DCAF8L2P0C7V8 631 aa17.53■□□□□ 0.4
PRRC2A-212ENST00000487089 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
PRRC2A-212ENST00000487089 DNAJC5BQ9UF47 199 aa17.36■□□□□ 0.37
PRRC2A-212ENST00000487089 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
PRRC2A-212ENST00000487089 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
PRRC2A-212ENST00000487089 SHROOM4Q9ULL8 1493 aa17.24■□□□□ 0.35
PRRC2A-212ENST00000487089 BICRAQ9NZM4 1560 aa17.17■□□□□ 0.34
PRRC2A-212ENST00000487089 UNC13AQ9UPW8 1703 aa17.14■□□□□ 0.33
PRRC2A-212ENST00000487089 SCRIBQ14160 1630 aa16.9■□□□□ 0.3
PRRC2A-212ENST00000487089 CECR2Q9BXF3 1484 aa16.8■□□□□ 0.28
PRRC2A-212ENST00000487089 EIF4G1Q04637 1599 aaKnown RBP16.8■□□□□ 0.28
PRRC2A-212ENST00000487089 CC2D2AQ9P2K1 1620 aa16.78■□□□□ 0.28
PRRC2A-212ENST00000487089 NCAPD3P42695 1498 aa16.41■□□□□ 0.22
PRRC2A-212ENST00000487089 SMARCA2P51531 1590 aa16.3■□□□□ 0.2
PRRC2A-212ENST00000487089 ATAD2BQ9ULI0 1458 aa16.29■□□□□ 0.2
PRRC2A-212ENST00000487089 HMGXB3Q12766 1538 aa16.24■□□□□ 0.19
PRRC2A-212ENST00000487089 BAZ1AQ9NRL2 1556 aaPredicted RBP16.24■□□□□ 0.19
PRRC2A-212ENST00000487089 SMARCA4P51532 1647 aa16.21■□□□□ 0.19
PRRC2A-212ENST00000487089 PEG3Q9GZU2 1588 aa16.16■□□□□ 0.18
PRRC2A-212ENST00000487089 CUX2O14529 1486 aa16.15■□□□□ 0.18
PRRC2A-212ENST00000487089 BAZ1BQ9UIG0 1483 aaKnown RBP16.13■□□□□ 0.17
PRRC2A-212ENST00000487089 ERCC6Q03468 1493 aa16.11■□□□□ 0.17
PRRC2A-212ENST00000487089 DNAJC5Q9H3Z4 198 aa16.09■□□□□ 0.17
PRRC2A-212ENST00000487089 MROH2BQ7Z745 1585 aa16■□□□□ 0.15
PRRC2A-212ENST00000487089 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.15
PRRC2A-212ENST00000487089 PDS5BQ9NTI5 1447 aa15.96■□□□□ 0.15
PRRC2A-212ENST00000487089 NESP48681 1621 aa15.91■□□□□ 0.14
PRRC2A-212ENST00000487089 CADPSQ9ULU8 1353 aa15.89■□□□□ 0.13
PRRC2A-212ENST00000487089 THOC2Q8NI27 1593 aaKnown RBP15.77■□□□□ 0.11
PRRC2A-212ENST00000487089 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.11
PRRC2A-212ENST00000487089 MRC2Q9UBG0 1479 aa15.73■□□□□ 0.11
PRRC2A-212ENST00000487089 WIZO95785 1651 aa15.73■□□□□ 0.11
PRRC2A-212ENST00000487089 CFTRP13569 1480 aa15.71■□□□□ 0.1
PRRC2A-212ENST00000487089 TOP2AP11388 1531 aaKnown RBP15.68■□□□□ 0.1
PRRC2A-212ENST00000487089 CEP164Q9UPV0 1460 aa15.67■□□□□ 0.1
PRRC2A-212ENST00000487089 WDR62O43379 1518 aa15.66■□□□□ 0.1
PRRC2A-212ENST00000487089 KIF21AQ7Z4S6 1674 aa15.65■□□□□ 0.1
PRRC2A-212ENST00000487089 FANCD2Q9BXW9 1451 aa15.65■□□□□ 0.1
PRRC2A-212ENST00000487089 CCDC88BA6NC98 1476 aa15.48■□□□□ 0.07
PRRC2A-212ENST00000487089 ABCC8Q09428 1581 aa15.47■□□□□ 0.07
PRRC2A-212ENST00000487089 URB2Q14146 1524 aaKnown RBP15.45■□□□□ 0.06
PRRC2A-212ENST00000487089 OSCARQ8IYS5 282 aa15.45■□□□□ 0.06
PRRC2A-212ENST00000487089 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
PRRC2A-212ENST00000487089 PRDM2Q13029 1718 aa15.38■□□□□ 0.05
PRRC2A-212ENST00000487089 TOPBP1Q92547 1522 aa15.33■□□□□ 0.05
PRRC2A-212ENST00000487089 DNMBPQ6XZF7 1577 aa15.29■□□□□ 0.04
PRRC2A-212ENST00000487089 TRIM41Q8WV44 630 aa15.24■□□□□ 0.03
PRRC2A-212ENST00000487089 ZNF608Q9ULD9 1512 aaPredicted RBP15.22■□□□□ 0.03
PRRC2A-212ENST00000487089 POLA1P09884 1462 aaPredicted RBP15.18■□□□□ 0.02
PRRC2A-212ENST00000487089 WDR97A6NE52 1622 aa15.17■□□□□ 0.02
PRRC2A-212ENST00000487089 SOGA1O94964 1423 aa15.17■□□□□ 0.02
PRRC2A-212ENST00000487089 TARBP1Q13395 1621 aaKnown RBP15.15■□□□□ 0.02
PRRC2A-212ENST00000487089 EIF4G3O43432 1585 aaKnown RBP15.13■□□□□ 0.01
PRRC2A-212ENST00000487089 AQRO60306 1485 aaKnown RBP eCLIP15.13■□□□□ 0.018e-9■■■■■ 48.4
PRRC2A-212ENST00000487089 CHIC1Q5VXU3 224 aa15.12■□□□□ 0.01
PRRC2A-212ENST00000487089 TDRD9Q8NDG6 1382 aaKnown RBP15.07■□□□□ 0
PRRC2A-212ENST00000487089 FGD5Q6ZNL6 1462 aa15.07■□□□□ 0
PRRC2A-212ENST00000487089 ARHGEF11O15085 1522 aa15.07■□□□□ 0
PRRC2A-212ENST00000487089 MAGI1Q96QZ7 1491 aaPredicted RBP15.06■□□□□ 0
PRRC2A-212ENST00000487089 FBLN2P98095 1184 aa15.05■□□□□ -0
PRRC2A-212ENST00000487089 GRIN2BQ13224 1484 aa15.05■□□□□ -0
PRRC2A-212ENST00000487089 RAD54L2Q9Y4B4 1467 aa15.05■□□□□ -0
PRRC2A-212ENST00000487089 CUX1P39880 1505 aa15.04■□□□□ -0
PRRC2A-212ENST00000487089 SUPT5HO00267 1087 aaKnown RBP15.03■□□□□ -0
PRRC2A-212ENST00000487089 CHMP7Q8WUX9 453 aaPredicted RBP15.03■□□□□ -0
PRRC2A-212ENST00000487089 RIMBP3CA6NJZ7 1639 aa15.03■□□□□ -0
PRRC2A-212ENST00000487089 RIMBP3BA6NNM3 1639 aa15.03■□□□□ -0
PRRC2A-212ENST00000487089 RIMBP3Q9UFD9 1639 aa15.03■□□□□ -0
PRRC2A-212ENST00000487089 SYNJ2O15056 1496 aa14.99□□□□□ -0.01
PRRC2A-212ENST00000487089 WRNQ14191 1432 aaPredicted RBP eCLIP14.99□□□□□ -0.01
PRRC2A-212ENST00000487089 ABCA10Q8WWZ4 1543 aa14.98□□□□□ -0.01
PRRC2A-212ENST00000487089 CYB5RLQ6IPT4 315 aa14.98□□□□□ -0.01
PRRC2A-212ENST00000487089 SNAPC4Q5SXM2 1469 aa14.97□□□□□ -0.01
PRRC2A-212ENST00000487089 GAPVD1Q14C86 1478 aa14.96□□□□□ -0.01
PRRC2A-212ENST00000487089 SYNJ1O43426 1573 aa14.95□□□□□ -0.02
PRRC2A-212ENST00000487089 CHD1O14646 1710 aa14.94□□□□□ -0.02
PRRC2A-212ENST00000487089 ARAP1Q96P48 1450 aa14.9□□□□□ -0.02
PRRC2A-212ENST00000487089 CLASP1Q7Z460 1538 aa14.9□□□□□ -0.02
PRRC2A-212ENST00000487089 TOP2BQ02880 1626 aa14.85□□□□□ -0.03
PRRC2A-212ENST00000487089 ABCA5Q8WWZ7 1642 aa14.85□□□□□ -0.03
PRRC2A-212ENST00000487089 FHAD1B1AJZ9 1412 aa14.83□□□□□ -0.04
PRRC2A-212ENST00000487089 GRIN2AQ12879 1464 aa14.81□□□□□ -0.04
PRRC2A-212ENST00000487089 ERICH3Q5RHP9 1530 aa14.81□□□□□ -0.04
PRRC2A-212ENST00000487089 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
PRRC2A-212ENST00000487089 TRHP20396 242 aaPredicted RBP14.79□□□□□ -0.04
PRRC2A-212ENST00000487089 NUP160Q12769 1436 aa14.79□□□□□ -0.04
PRRC2A-212ENST00000487089 PBRM1Q86U86 1689 aa14.79□□□□□ -0.04
PRRC2A-212ENST00000487089 AEBP2Q6ZN18 517 aaPredicted RBP14.76□□□□□ -0.05
PRRC2A-212ENST00000487089 ADAMTS12P58397 1594 aa14.74□□□□□ -0.05
PRRC2A-212ENST00000487089 JPH4Q96JJ6 628 aa14.67□□□□□ -0.06
PRRC2A-212ENST00000487089 KIF27Q86VH2 1401 aa14.66□□□□□ -0.06
PRRC2A-212ENST00000487089 CEP170Q5SW79 1584 aa14.65□□□□□ -0.06
PRRC2A-212ENST00000487089 SHROOM2Q13796 1616 aa14.65□□□□□ -0.06
PRRC2A-212ENST00000487089 IGF1RP08069 1367 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms