RNA–Protein interactions for RNA: ENST00000486851.5

ELL3-205, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 2

Gene ELL3, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-205ENST00000486851 NISCHQ9Y2I1 1504 aa27.25■■□□□ 1.95
ELL3-205ENST00000486851 ABCC9O60706 1549 aa24.86■■□□□ 1.57
ELL3-205ENST00000486851 CCDC180Q9P1Z9 1646 aa24.63■■□□□ 1.53
ELL3-205ENST00000486851 DNAJC5BQ9UF47 199 aa23.76■■□□□ 1.39
ELL3-205ENST00000486851 RB1CC1Q8TDY2 1594 aa23.52■■□□□ 1.36
ELL3-205ENST00000486851 NACADO15069 1562 aa23.33■■□□□ 1.33
ELL3-205ENST00000486851 UNC13AQ9UPW8 1703 aa23.13■■□□□ 1.29
ELL3-205ENST00000486851 PABPN1Q86U42 306 aaKnown RBP eCLIP23.04■■□□□ 1.28
ELL3-205ENST00000486851 BICRAQ9NZM4 1560 aa23.02■■□□□ 1.28
ELL3-205ENST00000486851 MYO15BQ96JP2 1530 aa22.99■■□□□ 1.27
ELL3-205ENST00000486851 DCAF8L2P0C7V8 631 aa22.79■■□□□ 1.24
ELL3-205ENST00000486851 SHROOM4Q9ULL8 1493 aa22.61■■□□□ 1.21
ELL3-205ENST00000486851 ZCCHC6Q5VYS8 1495 aaKnown RBP22.55■■□□□ 1.2
ELL3-205ENST00000486851 DCAF1Q9Y4B6 1507 aa22.55■■□□□ 1.2
ELL3-205ENST00000486851 CC2D2AQ9P2K1 1620 aa22.51■■□□□ 1.19
ELL3-205ENST00000486851 CECR2Q9BXF3 1484 aa22.45■■□□□ 1.18
ELL3-205ENST00000486851 EIF4G1Q04637 1599 aaKnown RBP22.39■■□□□ 1.18
ELL3-205ENST00000486851 SCRIBQ14160 1630 aa22.32■■□□□ 1.16
ELL3-205ENST00000486851 DNAJC5Q9H3Z4 198 aa22■■□□□ 1.11
ELL3-205ENST00000486851 CUX2O14529 1486 aa21.63■■□□□ 1.05
ELL3-205ENST00000486851 NCAPD3P42695 1498 aa21.58■■□□□ 1.05
ELL3-205ENST00000486851 ATAD2BQ9ULI0 1458 aa21.45■■□□□ 1.02
ELL3-205ENST00000486851 ERCC6Q03468 1493 aa21.39■■□□□ 1.02
ELL3-205ENST00000486851 HMGXB3Q12766 1538 aa21.39■■□□□ 1.01
ELL3-205ENST00000486851 SMARCA4P51532 1647 aa21.33■■□□□ 1.01
ELL3-205ENST00000486851 NESP48681 1621 aa21.33■■□□□ 1
ELL3-205ENST00000486851 SMARCA2P51531 1590 aa21.31■■□□□ 1
ELL3-205ENST00000486851 THOC2Q8NI27 1593 aaKnown RBP21.25■□□□□ 0.99
ELL3-205ENST00000486851 PEG3Q9GZU2 1588 aa21.22■□□□□ 0.99
ELL3-205ENST00000486851 BAZ1AQ9NRL2 1556 aaPredicted RBP21.13■□□□□ 0.97
ELL3-205ENST00000486851 BAZ1BQ9UIG0 1483 aaKnown RBP21.13■□□□□ 0.97
ELL3-205ENST00000486851 LAMC3Q9Y6N6 1575 aa21.1■□□□□ 0.97
ELL3-205ENST00000486851 KIF21AQ7Z4S6 1674 aa21.04■□□□□ 0.96
ELL3-205ENST00000486851 MROH2BQ7Z745 1585 aa21■□□□□ 0.95
ELL3-205ENST00000486851 PDS5BQ9NTI5 1447 aa20.91■□□□□ 0.94
ELL3-205ENST00000486851 WDR62O43379 1518 aa20.85■□□□□ 0.93
ELL3-205ENST00000486851 CADPSQ9ULU8 1353 aa20.84■□□□□ 0.93
ELL3-205ENST00000486851 MRC2Q9UBG0 1479 aa20.81■□□□□ 0.92
ELL3-205ENST00000486851 WIZO95785 1651 aa20.7■□□□□ 0.91
ELL3-205ENST00000486851 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
ELL3-205ENST00000486851 CEP164Q9UPV0 1460 aa20.62■□□□□ 0.89
ELL3-205ENST00000486851 CFTRP13569 1480 aa20.59■□□□□ 0.89
ELL3-205ENST00000486851 FANCD2Q9BXW9 1451 aa20.59■□□□□ 0.89
ELL3-205ENST00000486851 URB2Q14146 1524 aaKnown RBP20.52■□□□□ 0.87
ELL3-205ENST00000486851 OSCARQ8IYS5 282 aa20.44■□□□□ 0.86
ELL3-205ENST00000486851 RSF1Q96T23 1441 aaPredicted RBP20.42■□□□□ 0.86
ELL3-205ENST00000486851 TOP2AP11388 1531 aaKnown RBP20.42■□□□□ 0.86
ELL3-205ENST00000486851 RIMBP3CA6NJZ7 1639 aa20.36■□□□□ 0.85
ELL3-205ENST00000486851 RIMBP3BA6NNM3 1639 aa20.36■□□□□ 0.85
ELL3-205ENST00000486851 RIMBP3Q9UFD9 1639 aa20.36■□□□□ 0.85
ELL3-205ENST00000486851 PRDM2Q13029 1718 aa20.35■□□□□ 0.85
ELL3-205ENST00000486851 ZNF608Q9ULD9 1512 aaPredicted RBP20.3■□□□□ 0.84
ELL3-205ENST00000486851 ARHGEF11O15085 1522 aa20.26■□□□□ 0.83
ELL3-205ENST00000486851 IFT140Q96RY7 1462 aa20.24■□□□□ 0.83
ELL3-205ENST00000486851 TOPBP1Q92547 1522 aa20.2■□□□□ 0.82
ELL3-205ENST00000486851 CCDC88BA6NC98 1476 aa20.18■□□□□ 0.82
ELL3-205ENST00000486851 EIF4G3O43432 1585 aaKnown RBP20.17■□□□□ 0.82
ELL3-205ENST00000486851 TARBP1Q13395 1621 aaKnown RBP20.12■□□□□ 0.81
ELL3-205ENST00000486851 DNMBPQ6XZF7 1577 aa20.08■□□□□ 0.81
ELL3-205ENST00000486851 CHD1O14646 1710 aa20.07■□□□□ 0.8
ELL3-205ENST00000486851 ARAP1Q96P48 1450 aa20.06■□□□□ 0.8
ELL3-205ENST00000486851 ABCC8Q09428 1581 aa20.05■□□□□ 0.8
ELL3-205ENST00000486851 AQRO60306 1485 aaKnown RBP eCLIP20.01■□□□□ 0.79
ELL3-205ENST00000486851 POLA1P09884 1462 aaPredicted RBP19.99■□□□□ 0.79
ELL3-205ENST00000486851 CYB5RLQ6IPT4 315 aa19.97■□□□□ 0.79
ELL3-205ENST00000486851 CLASP1Q7Z460 1538 aa19.91■□□□□ 0.78
ELL3-205ENST00000486851 RAD54L2Q9Y4B4 1467 aa19.88■□□□□ 0.77
ELL3-205ENST00000486851 WDR97A6NE52 1622 aa19.84■□□□□ 0.77
ELL3-205ENST00000486851 TDRD9Q8NDG6 1382 aaKnown RBP19.81■□□□□ 0.76
ELL3-205ENST00000486851 SNAPC4Q5SXM2 1469 aa19.8■□□□□ 0.76
ELL3-205ENST00000486851 SOGA1O94964 1423 aa19.78■□□□□ 0.76
ELL3-205ENST00000486851 FGD5Q6ZNL6 1462 aa19.77■□□□□ 0.76
ELL3-205ENST00000486851 MAGI1Q96QZ7 1491 aaPredicted RBP19.75■□□□□ 0.75
ELL3-205ENST00000486851 TRHP20396 242 aaPredicted RBP19.75■□□□□ 0.75
ELL3-205ENST00000486851 CUX1P39880 1505 aa19.75■□□□□ 0.75
ELL3-205ENST00000486851 FBLN2P98095 1184 aa19.73■□□□□ 0.75
ELL3-205ENST00000486851 SYNJ1O43426 1573 aa19.72■□□□□ 0.75
ELL3-205ENST00000486851 SYNJ2O15056 1496 aa19.69■□□□□ 0.74
ELL3-205ENST00000486851 GRIN2BQ13224 1484 aa19.69■□□□□ 0.74
ELL3-205ENST00000486851 PBRM1Q86U86 1689 aa19.62■□□□□ 0.73
ELL3-205ENST00000486851 ABCA5Q8WWZ7 1642 aa19.61■□□□□ 0.73
ELL3-205ENST00000486851 GAPVD1Q14C86 1478 aa19.6■□□□□ 0.73
ELL3-205ENST00000486851 CHMP7Q8WUX9 453 aaPredicted RBP19.6■□□□□ 0.73
ELL3-205ENST00000486851 ABCA10Q8WWZ4 1543 aa19.56■□□□□ 0.72
ELL3-205ENST00000486851 ERCC6L2Q5T890 1561 aa19.56■□□□□ 0.72
ELL3-205ENST00000486851 NUP160Q12769 1436 aa19.48■□□□□ 0.71
ELL3-205ENST00000486851 CEP170Q5SW79 1584 aa19.47■□□□□ 0.71
ELL3-205ENST00000486851 GRIN2AQ12879 1464 aa19.47■□□□□ 0.71
ELL3-205ENST00000486851 SHROOM2Q13796 1616 aa19.47■□□□□ 0.71
ELL3-205ENST00000486851 ADAMTS12P58397 1594 aa19.45■□□□□ 0.7
ELL3-205ENST00000486851 KIF13AQ9H1H9 1805 aa19.38■□□□□ 0.69
ELL3-205ENST00000486851 AEBP2Q6ZN18 517 aaPredicted RBP19.37■□□□□ 0.69
ELL3-205ENST00000486851 BIVM-ERCC5R4GMW8 1640 aa19.34■□□□□ 0.69
ELL3-205ENST00000486851 WRNQ14191 1432 aaPredicted RBP eCLIP19.32■□□□□ 0.68
ELL3-205ENST00000486851 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
ELL3-205ENST00000486851 FHAD1B1AJZ9 1412 aa19.31■□□□□ 0.68
ELL3-205ENST00000486851 ERICH3Q5RHP9 1530 aa19.29■□□□□ 0.68
ELL3-205ENST00000486851 PRG4Q92954 1404 aaPredicted RBP19.2■□□□□ 0.66
ELL3-205ENST00000486851 RUSC2Q8N2Y8 1516 aa19.2■□□□□ 0.66
ELL3-205ENST00000486851 ABCC10Q5T3U5 1492 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms