RNA–Protein interactions for RNA: ENST00000486706.6

ZSWIM7-210, Transcript of zinc finger SWIM-type containing 7, humanhuman

TSL 1 (best)

Gene ZSWIM7, Length 918 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM7-210ENST00000486706 NISCHQ9Y2I1 1504 aa53.72■■■■■ 6.19
ZSWIM7-210ENST00000486706 CCDC180Q9P1Z9 1646 aa48.18■■■■■ 5.3
ZSWIM7-210ENST00000486706 ABCC9O60706 1549 aa48■■■■■ 5.27
ZSWIM7-210ENST00000486706 RB1CC1Q8TDY2 1594 aa45.73■■■■■ 4.91
ZSWIM7-210ENST00000486706 NACADO15069 1562 aa45.4■■■■■ 4.86
ZSWIM7-210ENST00000486706 DCAF8L2P0C7V8 631 aa45.37■■■■■ 4.85
ZSWIM7-210ENST00000486706 UNC13AQ9UPW8 1703 aa44.88■■■■■ 4.78
ZSWIM7-210ENST00000486706 MYO15BQ96JP2 1530 aa44.72■■■■■ 4.75
ZSWIM7-210ENST00000486706 PABPN1Q86U42 306 aaKnown RBP eCLIP44.67■■■■■ 4.74
ZSWIM7-210ENST00000486706 DNAJC5BQ9UF47 199 aa44.64■■■■■ 4.74
ZSWIM7-210ENST00000486706 ZCCHC6Q5VYS8 1495 aaKnown RBP44.59■■■■■ 4.73
ZSWIM7-210ENST00000486706 BICRAQ9NZM4 1560 aa44.37■■■■■ 4.69
ZSWIM7-210ENST00000486706 DCAF1Q9Y4B6 1507 aa44.29■■■■■ 4.68
ZSWIM7-210ENST00000486706 SCRIBQ14160 1630 aa44.06■■■■■ 4.64
ZSWIM7-210ENST00000486706 SHROOM4Q9ULL8 1493 aa43.66■■■■■ 4.58
ZSWIM7-210ENST00000486706 CC2D2AQ9P2K1 1620 aa43.36■■■■■ 4.53
ZSWIM7-210ENST00000486706 EIF4G1Q04637 1599 aaKnown RBP43.29■■■■■ 4.52
ZSWIM7-210ENST00000486706 CECR2Q9BXF3 1484 aa43.14■■■■■ 4.5
ZSWIM7-210ENST00000486706 SMARCA4P51532 1647 aa41.95■■■■■ 4.31
ZSWIM7-210ENST00000486706 NCAPD3P42695 1498 aa41.83■■■■■ 4.29
ZSWIM7-210ENST00000486706 ATAD2BQ9ULI0 1458 aa41.82■■■■■ 4.29
ZSWIM7-210ENST00000486706 SMARCA2P51531 1590 aa41.76■■■■■ 4.27
ZSWIM7-210ENST00000486706 BAZ1AQ9NRL2 1556 aaPredicted RBP41.72■■■■■ 4.27
ZSWIM7-210ENST00000486706 HMGXB3Q12766 1538 aa41.65■■■■■ 4.26
ZSWIM7-210ENST00000486706 BAZ1BQ9UIG0 1483 aaKnown RBP41.52■■■■■ 4.24
ZSWIM7-210ENST00000486706 MROH2BQ7Z745 1585 aa41.46■■■■■ 4.23
ZSWIM7-210ENST00000486706 ERCC6Q03468 1493 aa41.43■■■■■ 4.22
ZSWIM7-210ENST00000486706 PEG3Q9GZU2 1588 aa41.41■■■■■ 4.22
ZSWIM7-210ENST00000486706 NESP48681 1621 aa41.29■■■■■ 4.2
ZSWIM7-210ENST00000486706 CUX2O14529 1486 aa41.14■■■■■ 4.18
ZSWIM7-210ENST00000486706 WIZO95785 1651 aa41.07■■■■■ 4.17
ZSWIM7-210ENST00000486706 LAMC3Q9Y6N6 1575 aa40.98■■■■■ 4.15
ZSWIM7-210ENST00000486706 KIF21AQ7Z4S6 1674 aa40.88■■■■■ 4.14
ZSWIM7-210ENST00000486706 THOC2Q8NI27 1593 aaKnown RBP40.83■■■■■ 4.13
ZSWIM7-210ENST00000486706 DNAJC5Q9H3Z4 198 aa40.75■■■■■ 4.11
ZSWIM7-210ENST00000486706 PDS5BQ9NTI5 1447 aa40.67■■■■■ 4.1
ZSWIM7-210ENST00000486706 CADPSQ9ULU8 1353 aa40.61■■■■■ 4.09
ZSWIM7-210ENST00000486706 RSF1Q96T23 1441 aaPredicted RBP40.6■■■■■ 4.09
ZSWIM7-210ENST00000486706 TOP2AP11388 1531 aaKnown RBP40.48■■■■■ 4.07
ZSWIM7-210ENST00000486706 MRC2Q9UBG0 1479 aa40.38■■■■■ 4.05
ZSWIM7-210ENST00000486706 CEP164Q9UPV0 1460 aa40.3■■■■■ 4.04
ZSWIM7-210ENST00000486706 WDR62O43379 1518 aa40.26■■■■■ 4.03
ZSWIM7-210ENST00000486706 FANCD2Q9BXW9 1451 aa40.25■■■■■ 4.03
ZSWIM7-210ENST00000486706 CFTRP13569 1480 aa40.2■■■■■ 4.03
ZSWIM7-210ENST00000486706 PRDM2Q13029 1718 aa40.09■■■■■ 4.01
ZSWIM7-210ENST00000486706 CCDC88BA6NC98 1476 aa39.98■■■■□ 3.99
ZSWIM7-210ENST00000486706 URB2Q14146 1524 aaKnown RBP39.91■■■■□ 3.98
ZSWIM7-210ENST00000486706 TOPBP1Q92547 1522 aa39.52■■■■□ 3.92
ZSWIM7-210ENST00000486706 IFT140Q96RY7 1462 aa39.42■■■■□ 3.9
ZSWIM7-210ENST00000486706 DNMBPQ6XZF7 1577 aa39.42■■■■□ 3.9
ZSWIM7-210ENST00000486706 ZNF608Q9ULD9 1512 aaPredicted RBP39.4■■■■□ 3.9
ZSWIM7-210ENST00000486706 ABCC8Q09428 1581 aa39.34■■■■□ 3.89
ZSWIM7-210ENST00000486706 TRIM41Q8WV44 630 aa39.31■■■■□ 3.88
ZSWIM7-210ENST00000486706 EIF4G3O43432 1585 aaKnown RBP39.28■■■■□ 3.88
ZSWIM7-210ENST00000486706 OSCARQ8IYS5 282 aa39.25■■■■□ 3.87
ZSWIM7-210ENST00000486706 TARBP1Q13395 1621 aaKnown RBP39.16■■■■□ 3.86
ZSWIM7-210ENST00000486706 SUPT5HO00267 1087 aaKnown RBP39.15■■■■□ 3.86
ZSWIM7-210ENST00000486706 POLA1P09884 1462 aaPredicted RBP39.12■■■■□ 3.85
ZSWIM7-210ENST00000486706 AQRO60306 1485 aaKnown RBP eCLIP39.05■■■■□ 3.842e-8■■■■■ 33.4
ZSWIM7-210ENST00000486706 RAD54L2Q9Y4B4 1467 aa39.02■■■■□ 3.84
ZSWIM7-210ENST00000486706 CHD1O14646 1710 aa39.01■■■■□ 3.84
ZSWIM7-210ENST00000486706 FGD5Q6ZNL6 1462 aa38.96■■■■□ 3.83
ZSWIM7-210ENST00000486706 CUX1P39880 1505 aa38.94■■■■□ 3.82
ZSWIM7-210ENST00000486706 RIMBP3CA6NJZ7 1639 aa38.92■■■■□ 3.82
ZSWIM7-210ENST00000486706 RIMBP3BA6NNM3 1639 aa38.92■■■■□ 3.82
ZSWIM7-210ENST00000486706 RIMBP3Q9UFD9 1639 aa38.92■■■■□ 3.82
ZSWIM7-210ENST00000486706 SOGA1O94964 1423 aa38.91■■■■□ 3.82
ZSWIM7-210ENST00000486706 TDRD9Q8NDG6 1382 aaKnown RBP38.84■■■■□ 3.81
ZSWIM7-210ENST00000486706 FBLN2P98095 1184 aa38.81■■■■□ 3.8
ZSWIM7-210ENST00000486706 ARHGEF11O15085 1522 aa38.75■■■■□ 3.79
ZSWIM7-210ENST00000486706 WDR97A6NE52 1622 aa38.73■■■■□ 3.79
ZSWIM7-210ENST00000486706 SNAPC4Q5SXM2 1469 aa38.71■■■■□ 3.79
ZSWIM7-210ENST00000486706 PBRM1Q86U86 1689 aa38.63■■■■□ 3.77
ZSWIM7-210ENST00000486706 GRIN2BQ13224 1484 aa38.56■■■■□ 3.76
ZSWIM7-210ENST00000486706 MAGI1Q96QZ7 1491 aaPredicted RBP38.53■■■■□ 3.76
ZSWIM7-210ENST00000486706 GAPVD1Q14C86 1478 aa38.47■■■■□ 3.75
ZSWIM7-210ENST00000486706 CHMP7Q8WUX9 453 aaPredicted RBP38.47■■■■□ 3.75
ZSWIM7-210ENST00000486706 ABCA5Q8WWZ7 1642 aa38.46■■■■□ 3.75
ZSWIM7-210ENST00000486706 SYNJ1O43426 1573 aa38.44■■■■□ 3.74
ZSWIM7-210ENST00000486706 ABCA10Q8WWZ4 1543 aa38.44■■■■□ 3.74
ZSWIM7-210ENST00000486706 BIVM-ERCC5R4GMW8 1640 aa38.42■■■■□ 3.74
ZSWIM7-210ENST00000486706 CYB5RLQ6IPT4 315 aa38.41■■■■□ 3.74
ZSWIM7-210ENST00000486706 SYNJ2O15056 1496 aa38.41■■■■□ 3.74
ZSWIM7-210ENST00000486706 CLASP1Q7Z460 1538 aa38.39■■■■□ 3.74
ZSWIM7-210ENST00000486706 TOP2BQ02880 1626 aa38.38■■■■□ 3.74
ZSWIM7-210ENST00000486706 ARAP1Q96P48 1450 aa38.38■■■■□ 3.73
ZSWIM7-210ENST00000486706 WRNQ14191 1432 aaPredicted RBP eCLIP38.36■■■■□ 3.73
ZSWIM7-210ENST00000486706 ADAMTS12P58397 1594 aa38.18■■■■□ 3.7
ZSWIM7-210ENST00000486706 GRIN2AQ12879 1464 aa38.09■■■■□ 3.69
ZSWIM7-210ENST00000486706 CEP170Q5SW79 1584 aa38.02■■■■□ 3.68
ZSWIM7-210ENST00000486706 TRHP20396 242 aaPredicted RBP37.99■■■■□ 3.67
ZSWIM7-210ENST00000486706 ERICH3Q5RHP9 1530 aa37.97■■■■□ 3.67
ZSWIM7-210ENST00000486706 FHAD1B1AJZ9 1412 aa37.95■■■■□ 3.67
ZSWIM7-210ENST00000486706 ERCC6L2Q5T890 1561 aa37.9■■■■□ 3.66
ZSWIM7-210ENST00000486706 NUP160Q12769 1436 aa37.88■■■■□ 3.66
ZSWIM7-210ENST00000486706 SHROOM2Q13796 1616 aa37.77■■■■□ 3.64
ZSWIM7-210ENST00000486706 RUSC2Q8N2Y8 1516 aa37.64■■■■□ 3.62
ZSWIM7-210ENST00000486706 KIF27Q86VH2 1401 aa37.59■■■■□ 3.61
ZSWIM7-210ENST00000486706 CUL7Q14999 1698 aa37.57■■■■□ 3.61
ZSWIM7-210ENST00000486706 PRG4Q92954 1404 aaPredicted RBP37.57■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms