RNA–Protein interactions for RNA: ENST00000486568.5

MFSD1-216, Transcript of major facilitator superfamily domain containing 1, humanhuman

TSL 4

Gene MFSD1, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD1-216ENST00000486568 NISCHQ9Y2I1 1504 aa46.51■■■■■ 5.04
MFSD1-216ENST00000486568 CCDC180Q9P1Z9 1646 aa41.51■■■■■ 4.23
MFSD1-216ENST00000486568 ABCC9O60706 1549 aa41.09■■■■■ 4.17
MFSD1-216ENST00000486568 RB1CC1Q8TDY2 1594 aa39.21■■■■□ 3.87
MFSD1-216ENST00000486568 NACADO15069 1562 aa39.05■■■■□ 3.84
MFSD1-216ENST00000486568 DCAF8L2P0C7V8 631 aa38.87■■■■□ 3.81
MFSD1-216ENST00000486568 ZCCHC6Q5VYS8 1495 aaKnown RBP38.71■■■■□ 3.79
MFSD1-216ENST00000486568 MYO15BQ96JP2 1530 aa38.66■■■■□ 3.78
MFSD1-216ENST00000486568 UNC13AQ9UPW8 1703 aa38.56■■■■□ 3.76
MFSD1-216ENST00000486568 DCAF1Q9Y4B6 1507 aa38.38■■■■□ 3.73
MFSD1-216ENST00000486568 PABPN1Q86U42 306 aaKnown RBP eCLIP38.3■■■■□ 3.72
MFSD1-216ENST00000486568 BICRAQ9NZM4 1560 aa38.26■■■■□ 3.72
MFSD1-216ENST00000486568 DNAJC5BQ9UF47 199 aa38.17■■■■□ 3.7
MFSD1-216ENST00000486568 SCRIBQ14160 1630 aa37.97■■■■□ 3.67
MFSD1-216ENST00000486568 SHROOM4Q9ULL8 1493 aa37.52■■■■□ 3.6
MFSD1-216ENST00000486568 EIF4G1Q04637 1599 aaKnown RBP37.18■■■■□ 3.54
MFSD1-216ENST00000486568 CC2D2AQ9P2K1 1620 aa37.14■■■■□ 3.54
MFSD1-216ENST00000486568 CECR2Q9BXF3 1484 aa36.89■■■■□ 3.5
MFSD1-216ENST00000486568 SMARCA4P51532 1647 aa36.23■■■■□ 3.39
MFSD1-216ENST00000486568 ATAD2BQ9ULI0 1458 aa36.09■■■■□ 3.37
MFSD1-216ENST00000486568 NCAPD3P42695 1498 aa36.06■■■■□ 3.36
MFSD1-216ENST00000486568 BAZ1AQ9NRL2 1556 aaPredicted RBP36.02■■■■□ 3.36
MFSD1-216ENST00000486568 MROH2BQ7Z745 1585 aa35.94■■■■□ 3.34
MFSD1-216ENST00000486568 SMARCA2P51531 1590 aa35.93■■■■□ 3.34
MFSD1-216ENST00000486568 HMGXB3Q12766 1538 aa35.88■■■■□ 3.33
MFSD1-216ENST00000486568 PEG3Q9GZU2 1588 aa35.83■■■■□ 3.33
MFSD1-216ENST00000486568 BAZ1BQ9UIG0 1483 aaKnown RBP35.73■■■■□ 3.31
MFSD1-216ENST00000486568 WIZO95785 1651 aa35.54■■■■□ 3.28
MFSD1-216ENST00000486568 NESP48681 1621 aa35.52■■■■□ 3.28
MFSD1-216ENST00000486568 ERCC6Q03468 1493 aa35.3■■■■□ 3.24
MFSD1-216ENST00000486568 RSF1Q96T23 1441 aaPredicted RBP35.3■■■■□ 3.24
MFSD1-216ENST00000486568 LAMC3Q9Y6N6 1575 aa35.17■■■■□ 3.22
MFSD1-216ENST00000486568 CUX2O14529 1486 aa35.08■■■■□ 3.21
MFSD1-216ENST00000486568 KIF21AQ7Z4S6 1674 aa35.07■■■■□ 3.2
MFSD1-216ENST00000486568 THOC2Q8NI27 1593 aaKnown RBP35.06■■■■□ 3.2
MFSD1-216ENST00000486568 TOP2AP11388 1531 aaKnown RBP35.05■■■■□ 3.2
MFSD1-216ENST00000486568 CADPSQ9ULU8 1353 aa34.97■■■■□ 3.19
MFSD1-216ENST00000486568 PDS5BQ9NTI5 1447 aa34.85■■■■□ 3.17
MFSD1-216ENST00000486568 CFTRP13569 1480 aa34.72■■■■□ 3.15
MFSD1-216ENST00000486568 MRC2Q9UBG0 1479 aa34.65■■■■□ 3.14
MFSD1-216ENST00000486568 CCDC88BA6NC98 1476 aa34.65■■■■□ 3.14
MFSD1-216ENST00000486568 FANCD2Q9BXW9 1451 aa34.64■■■■□ 3.14
MFSD1-216ENST00000486568 WDR62O43379 1518 aa34.61■■■■□ 3.13
MFSD1-216ENST00000486568 CEP164Q9UPV0 1460 aa34.59■■■■□ 3.13
MFSD1-216ENST00000486568 PRDM2Q13029 1718 aa34.48■■■■□ 3.11
MFSD1-216ENST00000486568 DNAJC5Q9H3Z4 198 aa34.47■■■■□ 3.11
MFSD1-216ENST00000486568 URB2Q14146 1524 aaKnown RBP34.42■■■■□ 3.1
MFSD1-216ENST00000486568 TOPBP1Q92547 1522 aa34.07■■■■□ 3.04
MFSD1-216ENST00000486568 SUPT5HO00267 1087 aaKnown RBP34■■■■□ 3.03
MFSD1-216ENST00000486568 DNMBPQ6XZF7 1577 aa33.97■■■■□ 3.03
MFSD1-216ENST00000486568 ZNF608Q9ULD9 1512 aaPredicted RBP33.93■■■■□ 3.02
MFSD1-216ENST00000486568 IFT140Q96RY7 1462 aa33.86■■■■□ 3.01
MFSD1-216ENST00000486568 ABCC8Q09428 1581 aa33.81■■■■□ 3
MFSD1-216ENST00000486568 TARBP1Q13395 1621 aaKnown RBP33.79■■■■□ 3
MFSD1-216ENST00000486568 POLA1P09884 1462 aaPredicted RBP33.76■■■■□ 3
MFSD1-216ENST00000486568 EIF4G3O43432 1585 aaKnown RBP33.76■■■□□ 2.99
MFSD1-216ENST00000486568 CUX1P39880 1505 aa33.73■■■□□ 2.99
MFSD1-216ENST00000486568 RAD54L2Q9Y4B4 1467 aa33.67■■■□□ 2.98
MFSD1-216ENST00000486568 FGD5Q6ZNL6 1462 aa33.63■■■□□ 2.97
MFSD1-216ENST00000486568 AQRO60306 1485 aaKnown RBP eCLIP33.6■■■□□ 2.97
MFSD1-216ENST00000486568 SOGA1O94964 1423 aa33.51■■■□□ 2.95
MFSD1-216ENST00000486568 WDR97A6NE52 1622 aa33.46■■■□□ 2.95
MFSD1-216ENST00000486568 TDRD9Q8NDG6 1382 aaKnown RBP33.45■■■□□ 2.94
MFSD1-216ENST00000486568 OSCARQ8IYS5 282 aa33.44■■■□□ 2.94
MFSD1-216ENST00000486568 CHD1O14646 1710 aa33.42■■■□□ 2.94
MFSD1-216ENST00000486568 SYNJ1O43426 1573 aa33.34■■■□□ 2.93
MFSD1-216ENST00000486568 SNAPC4Q5SXM2 1469 aa33.3■■■□□ 2.92
MFSD1-216ENST00000486568 BIVM-ERCC5R4GMW8 1640 aa33.28■■■□□ 2.92
MFSD1-216ENST00000486568 TOP2BQ02880 1626 aa33.25■■■□□ 2.91
MFSD1-216ENST00000486568 ABCA5Q8WWZ7 1642 aa33.23■■■□□ 2.91
MFSD1-216ENST00000486568 ABCA10Q8WWZ4 1543 aa33.23■■■□□ 2.91
MFSD1-216ENST00000486568 WRNQ14191 1432 aaPredicted RBP eCLIP33.22■■■□□ 2.91
MFSD1-216ENST00000486568 RIMBP3CA6NJZ7 1639 aa33.22■■■□□ 2.91
MFSD1-216ENST00000486568 RIMBP3BA6NNM3 1639 aa33.22■■■□□ 2.91
MFSD1-216ENST00000486568 RIMBP3Q9UFD9 1639 aa33.22■■■□□ 2.91
MFSD1-216ENST00000486568 PBRM1Q86U86 1689 aa33.22■■■□□ 2.91
MFSD1-216ENST00000486568 TRIM41Q8WV44 630 aa33.2■■■□□ 2.91
MFSD1-216ENST00000486568 GRIN2BQ13224 1484 aa33.18■■■□□ 2.9
MFSD1-216ENST00000486568 GAPVD1Q14C86 1478 aa33.14■■■□□ 2.9
MFSD1-216ENST00000486568 ARHGEF11O15085 1522 aa33.12■■■□□ 2.89
MFSD1-216ENST00000486568 MAGI1Q96QZ7 1491 aaPredicted RBP33.12■■■□□ 2.89
MFSD1-216ENST00000486568 FBLN2P98095 1184 aa33.12■■■□□ 2.89
MFSD1-216ENST00000486568 CLASP1Q7Z460 1538 aa33.03■■■□□ 2.88
MFSD1-216ENST00000486568 SYNJ2O15056 1496 aa33.02■■■□□ 2.88
MFSD1-216ENST00000486568 ADAMTS12P58397 1594 aa32.94■■■□□ 2.86
MFSD1-216ENST00000486568 CHMP7Q8WUX9 453 aaPredicted RBP32.92■■■□□ 2.86
MFSD1-216ENST00000486568 ARAP1Q96P48 1450 aa32.89■■■□□ 2.86
MFSD1-216ENST00000486568 GRIN2AQ12879 1464 aa32.81■■■□□ 2.84
MFSD1-216ENST00000486568 CEP170Q5SW79 1584 aa32.78■■■□□ 2.84
MFSD1-216ENST00000486568 ERICH3Q5RHP9 1530 aa32.77■■■□□ 2.84
MFSD1-216ENST00000486568 FHAD1B1AJZ9 1412 aa32.71■■■□□ 2.83
MFSD1-216ENST00000486568 CYB5RLQ6IPT4 315 aa32.71■■■□□ 2.83
MFSD1-216ENST00000486568 NUP160Q12769 1436 aa32.68■■■□□ 2.82
MFSD1-216ENST00000486568 ERCC6L2Q5T890 1561 aa32.66■■■□□ 2.82
MFSD1-216ENST00000486568 SHROOM2Q13796 1616 aa32.55■■■□□ 2.8
MFSD1-216ENST00000486568 KIF27Q86VH2 1401 aa32.49■■■□□ 2.79
MFSD1-216ENST00000486568 IGF1RP08069 1367 aa32.48■■■□□ 2.79
MFSD1-216ENST00000486568 RUSC2Q8N2Y8 1516 aa32.48■■■□□ 2.79
MFSD1-216ENST00000486568 CUL7Q14999 1698 aa32.41■■■□□ 2.78
MFSD1-216ENST00000486568 PRG4Q92954 1404 aaPredicted RBP32.28■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms