RNA–Protein interactions for RNA: ENST00000486101.1

MRPL38-212, Transcript of mitochondrial ribosomal protein L38, humanhuman

TSL 2

Gene MRPL38, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-212ENST00000486101 NISCHQ9Y2I1 1504 aa30.04■■■□□ 2.4
MRPL38-212ENST00000486101 DNAJC5BQ9UF47 199 aa29.76■■■□□ 2.35
MRPL38-212ENST00000486101 ABCC9O60706 1549 aa29.71■■■□□ 2.35
MRPL38-212ENST00000486101 DNAJC5Q9H3Z4 198 aa28.76■■■□□ 2.19
MRPL38-212ENST00000486101 CCDC180Q9P1Z9 1646 aa27.78■■■□□ 2.04
MRPL38-212ENST00000486101 RB1CC1Q8TDY2 1594 aa27.4■■□□□ 1.98
MRPL38-212ENST00000486101 PABPN1Q86U42 306 aaKnown RBP eCLIP27.36■■□□□ 1.972e-10■■■■■ 39.9
MRPL38-212ENST00000486101 CECR2Q9BXF3 1484 aa26.99■■□□□ 1.91
MRPL38-212ENST00000486101 UNC13AQ9UPW8 1703 aa26.77■■□□□ 1.88
MRPL38-212ENST00000486101 NACADO15069 1562 aa26.75■■□□□ 1.87
MRPL38-212ENST00000486101 BICRAQ9NZM4 1560 aa26.75■■□□□ 1.87
MRPL38-212ENST00000486101 CC2D2AQ9P2K1 1620 aa26.75■■□□□ 1.87
MRPL38-212ENST00000486101 TRIM41Q8WV44 630 aa26.55■■□□□ 1.84
MRPL38-212ENST00000486101 CUX2O14529 1486 aa26.46■■□□□ 1.83
MRPL38-212ENST00000486101 EIF4G1Q04637 1599 aaKnown RBP26.21■■□□□ 1.79
MRPL38-212ENST00000486101 SHROOM4Q9ULL8 1493 aa26.17■■□□□ 1.78
MRPL38-212ENST00000486101 DCAF8L2P0C7V8 631 aa26.11■■□□□ 1.77
MRPL38-212ENST00000486101 MYO15BQ96JP2 1530 aa25.79■■□□□ 1.72
MRPL38-212ENST00000486101 ERCC6Q03468 1493 aa25.75■■□□□ 1.71
MRPL38-212ENST00000486101 AEBP2Q6ZN18 517 aaPredicted RBP25.5■■□□□ 1.67
MRPL38-212ENST00000486101 SCRIBQ14160 1630 aa25.23■■□□□ 1.63
MRPL38-212ENST00000486101 THOC2Q8NI27 1593 aaKnown RBP25.12■■□□□ 1.61
MRPL38-212ENST00000486101 NESP48681 1621 aa24.97■■□□□ 1.59
MRPL38-212ENST00000486101 ILDR1Q86SU0 546 aaPredicted RBP24.92■■□□□ 1.58
MRPL38-212ENST00000486101 OSCARQ8IYS5 282 aa24.92■■□□□ 1.58
MRPL38-212ENST00000486101 BAZ1AQ9NRL2 1556 aaPredicted RBP24.81■■□□□ 1.56
MRPL38-212ENST00000486101 RIMBP3CA6NJZ7 1639 aa24.79■■□□□ 1.56
MRPL38-212ENST00000486101 RIMBP3BA6NNM3 1639 aa24.79■■□□□ 1.56
MRPL38-212ENST00000486101 RIMBP3Q9UFD9 1639 aa24.79■■□□□ 1.56
MRPL38-212ENST00000486101 NCAPD3P42695 1498 aa24.78■■□□□ 1.56
MRPL38-212ENST00000486101 TRHP20396 242 aaPredicted RBP24.77■■□□□ 1.56
MRPL38-212ENST00000486101 DCAF1Q9Y4B6 1507 aa24.72■■□□□ 1.55
MRPL38-212ENST00000486101 SMARCA2P51531 1590 aa24.7■■□□□ 1.54
MRPL38-212ENST00000486101 ZCCHC6Q5VYS8 1495 aaKnown RBP24.67■■□□□ 1.54
MRPL38-212ENST00000486101 KIF21AQ7Z4S6 1674 aa24.54■■□□□ 1.52
MRPL38-212ENST00000486101 ARHGEF11O15085 1522 aa24.51■■□□□ 1.51
MRPL38-212ENST00000486101 LAMC3Q9Y6N6 1575 aa24.47■■□□□ 1.51
MRPL38-212ENST00000486101 CYB5RLQ6IPT4 315 aa24.45■■□□□ 1.5
MRPL38-212ENST00000486101 PDS5BQ9NTI5 1447 aa24.41■■□□□ 1.5
MRPL38-212ENST00000486101 ATAD2BQ9ULI0 1458 aa24.39■■□□□ 1.5
MRPL38-212ENST00000486101 HMGXB3Q12766 1538 aa24.36■■□□□ 1.49
MRPL38-212ENST00000486101 WDR62O43379 1518 aa24.33■■□□□ 1.49
MRPL38-212ENST00000486101 MRC2Q9UBG0 1479 aa24.31■■□□□ 1.48
MRPL38-212ENST00000486101 ARAP1Q96P48 1450 aa24.15■■□□□ 1.46
MRPL38-212ENST00000486101 BAZ1BQ9UIG0 1483 aaKnown RBP23.99■■□□□ 1.43
MRPL38-212ENST00000486101 CADPSQ9ULU8 1353 aa23.91■■□□□ 1.42
MRPL38-212ENST00000486101 SMARCA4P51532 1647 aa23.83■■□□□ 1.41
MRPL38-212ENST00000486101 CEP164Q9UPV0 1460 aa23.79■■□□□ 1.4
MRPL38-212ENST00000486101 RSF1Q96T23 1441 aaPredicted RBP23.76■■□□□ 1.39
MRPL38-212ENST00000486101 PEG3Q9GZU2 1588 aa23.67■■□□□ 1.38
MRPL38-212ENST00000486101 KDM4FA0A1W2PPD8 638 aa23.66■■□□□ 1.38
MRPL38-212ENST00000486101 FANCD2Q9BXW9 1451 aa23.61■■□□□ 1.37
MRPL38-212ENST00000486101 ZNF608Q9ULD9 1512 aaPredicted RBP23.59■■□□□ 1.37
MRPL38-212ENST00000486101 URB2Q14146 1524 aaKnown RBP23.56■■□□□ 1.36
MRPL38-212ENST00000486101 FBXO41Q8TF61 875 aa23.53■■□□□ 1.36
MRPL38-212ENST00000486101 CHD1O14646 1710 aa23.49■■□□□ 1.35
MRPL38-212ENST00000486101 LMTK3Q96Q04 1460 aa23.49■■□□□ 1.35
MRPL38-212ENST00000486101 SOCS7O14512 581 aa23.44■■□□□ 1.34
MRPL38-212ENST00000486101 ERCC6L2Q5T890 1561 aa23.42■■□□□ 1.34
MRPL38-212ENST00000486101 IFT140Q96RY7 1462 aa23.42■■□□□ 1.34
MRPL38-212ENST00000486101 EIF4G3O43432 1585 aaKnown RBP23.31■■□□□ 1.32
MRPL38-212ENST00000486101 FBLN2P98095 1184 aa23.3■■□□□ 1.32
MRPL38-212ENST00000486101 CLASP1Q7Z460 1538 aa23.25■■□□□ 1.31
MRPL38-212ENST00000486101 ILDR2Q71H61 639 aa23.24■■□□□ 1.31
MRPL38-212ENST00000486101 HECW2Q9P2P5 1572 aa23.23■■□□□ 1.31
MRPL38-212ENST00000486101 CFTRP13569 1480 aa23.23■■□□□ 1.31
MRPL38-212ENST00000486101 GAPVD1Q14C86 1478 aa23.16■■□□□ 1.3
MRPL38-212ENST00000486101 KIF13AQ9H1H9 1805 aa23.13■■□□□ 1.29
MRPL38-212ENST00000486101 AQRO60306 1485 aaKnown RBP eCLIP23.12■■□□□ 1.292e-11■■■■■ 31
MRPL38-212ENST00000486101 MROH2BQ7Z745 1585 aa23.12■■□□□ 1.29
MRPL38-212ENST00000486101 SYNJ1O43426 1573 aa22.99■■□□□ 1.27
MRPL38-212ENST00000486101 SYNJ2O15056 1496 aa22.98■■□□□ 1.27
MRPL38-212ENST00000486101 TOPBP1Q92547 1522 aa22.94■■□□□ 1.26
MRPL38-212ENST00000486101 ADGRL1O94910 1474 aa22.92■■□□□ 1.26
MRPL38-212ENST00000486101 DISP3Q9P2K9 1392 aa22.91■■□□□ 1.26
MRPL38-212ENST00000486101 TARBP1Q13395 1621 aaKnown RBP22.91■■□□□ 1.26
MRPL38-212ENST00000486101 KDM6BO15054 1643 aa22.9■■□□□ 1.26
MRPL38-212ENST00000486101 CHMP7Q8WUX9 453 aaPredicted RBP22.84■■□□□ 1.25
MRPL38-212ENST00000486101 FAM69CQ0P6D2 419 aa22.81■■□□□ 1.24
MRPL38-212ENST00000486101 SNAPC4Q5SXM2 1469 aa22.79■■□□□ 1.24
MRPL38-212ENST00000486101 ABCC10Q5T3U5 1492 aa22.77■■□□□ 1.24
MRPL38-212ENST00000486101 ABCC8Q09428 1581 aa22.76■■□□□ 1.23
MRPL38-212ENST00000486101 PRDM2Q13029 1718 aa22.72■■□□□ 1.23
MRPL38-212ENST00000486101 WIZO95785 1651 aa22.71■■□□□ 1.23
MRPL38-212ENST00000486101 MAGI1Q96QZ7 1491 aaPredicted RBP22.67■■□□□ 1.22
MRPL38-212ENST00000486101 DNMBPQ6XZF7 1577 aa22.66■■□□□ 1.22
MRPL38-212ENST00000486101 TDRD9Q8NDG6 1382 aaKnown RBP22.65■■□□□ 1.22
MRPL38-212ENST00000486101 DIP2BQ9P265 1576 aa22.61■■□□□ 1.21
MRPL38-212ENST00000486101 POLA1P09884 1462 aaPredicted RBP22.59■■□□□ 1.21
MRPL38-212ENST00000486101 RAD54L2Q9Y4B4 1467 aa22.54■■□□□ 1.2
MRPL38-212ENST00000486101 WDR97A6NE52 1622 aa22.51■■□□□ 1.19
MRPL38-212ENST00000486101 MAPKBP1O60336 1514 aa22.51■■□□□ 1.19
MRPL38-212ENST00000486101 TSPOAP1O95153 1857 aa22.49■■□□□ 1.19
MRPL38-212ENST00000486101 CEP170Q5SW79 1584 aa22.47■■□□□ 1.19
MRPL38-212ENST00000486101 SPATA31D1Q6ZQQ2 1576 aa22.47■■□□□ 1.19
MRPL38-212ENST00000486101 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
MRPL38-212ENST00000486101 SOGA1O94964 1423 aa22.44■■□□□ 1.18
MRPL38-212ENST00000486101 NPM1P06748 294 aaKnown RBP eCLIP22.35■■□□□ 1.17
MRPL38-212ENST00000486101 SHROOM2Q13796 1616 aa22.33■■□□□ 1.17
MRPL38-212ENST00000486101 TOP2BQ02880 1626 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms