RNA–Protein interactions for RNA: ENST00000485998.6

CCDC136-211, Transcript of coiled-coil domain containing 136, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC136, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136-211ENST00000485998 NISCHQ9Y2I1 1504 aa44.56■■■■■ 4.72
CCDC136-211ENST00000485998 ABCC9O60706 1549 aa40.47■■■■■ 4.07
CCDC136-211ENST00000485998 CCDC180Q9P1Z9 1646 aa40.2■■■■■ 4.03
CCDC136-211ENST00000485998 RB1CC1Q8TDY2 1594 aa38.36■■■■□ 3.73
CCDC136-211ENST00000485998 DNAJC5BQ9UF47 199 aa38.19■■■■□ 3.7
CCDC136-211ENST00000485998 NACADO15069 1562 aa38■■■■□ 3.67
CCDC136-211ENST00000485998 UNC13AQ9UPW8 1703 aa37.62■■■■□ 3.61
CCDC136-211ENST00000485998 DCAF8L2P0C7V8 631 aa37.59■■■■□ 3.61
CCDC136-211ENST00000485998 PABPN1Q86U42 306 aaKnown RBP eCLIP37.55■■■■□ 3.6
CCDC136-211ENST00000485998 MYO15BQ96JP2 1530 aa37.36■■■■□ 3.57
CCDC136-211ENST00000485998 BICRAQ9NZM4 1560 aa37.33■■■■□ 3.57
CCDC136-211ENST00000485998 ZCCHC6Q5VYS8 1495 aaKnown RBP36.93■■■■□ 3.5
CCDC136-211ENST00000485998 DCAF1Q9Y4B6 1507 aa36.78■■■■□ 3.48
CCDC136-211ENST00000485998 SHROOM4Q9ULL8 1493 aa36.72■■■■□ 3.47
CCDC136-211ENST00000485998 SCRIBQ14160 1630 aa36.64■■■■□ 3.46
CCDC136-211ENST00000485998 CC2D2AQ9P2K1 1620 aa36.58■■■■□ 3.45
CCDC136-211ENST00000485998 CECR2Q9BXF3 1484 aa36.47■■■■□ 3.43
CCDC136-211ENST00000485998 EIF4G1Q04637 1599 aaKnown RBP36.42■■■■□ 3.42
CCDC136-211ENST00000485998 DNAJC5Q9H3Z4 198 aa35.22■■■■□ 3.23
CCDC136-211ENST00000485998 NCAPD3P42695 1498 aa35.06■■■■□ 3.2
CCDC136-211ENST00000485998 CUX2O14529 1486 aa34.99■■■■□ 3.19
CCDC136-211ENST00000485998 ATAD2BQ9ULI0 1458 aa34.95■■■■□ 3.19
CCDC136-211ENST00000485998 ERCC6Q03468 1493 aa34.94■■■■□ 3.18
CCDC136-211ENST00000485998 SMARCA4P51532 1647 aa34.89■■■■□ 3.18
CCDC136-211ENST00000485998 HMGXB3Q12766 1538 aa34.86■■■■□ 3.17
CCDC136-211ENST00000485998 SMARCA2P51531 1590 aa34.83■■■■□ 3.17
CCDC136-211ENST00000485998 NESP48681 1621 aa34.7■■■■□ 3.15
CCDC136-211ENST00000485998 BAZ1AQ9NRL2 1556 aaPredicted RBP34.62■■■■□ 3.13
CCDC136-211ENST00000485998 BAZ1BQ9UIG0 1483 aaKnown RBP34.6■■■■□ 3.13
CCDC136-211ENST00000485998 PEG3Q9GZU2 1588 aa34.53■■■■□ 3.12
CCDC136-211ENST00000485998 THOC2Q8NI27 1593 aaKnown RBP34.49■■■■□ 3.11
CCDC136-211ENST00000485998 MROH2BQ7Z745 1585 aa34.37■■■■□ 3.09
CCDC136-211ENST00000485998 LAMC3Q9Y6N6 1575 aa34.37■■■■□ 3.09
CCDC136-211ENST00000485998 KIF21AQ7Z4S6 1674 aa34.3■■■■□ 3.08
CCDC136-211ENST00000485998 PDS5BQ9NTI5 1447 aa34.1■■■■□ 3.05
CCDC136-211ENST00000485998 WIZO95785 1651 aa33.97■■■■□ 3.03
CCDC136-211ENST00000485998 CADPSQ9ULU8 1353 aa33.96■■■■□ 3.03
CCDC136-211ENST00000485998 MRC2Q9UBG0 1479 aa33.92■■■■□ 3.02
CCDC136-211ENST00000485998 WDR62O43379 1518 aa33.89■■■■□ 3.02
CCDC136-211ENST00000485998 CEP164Q9UPV0 1460 aa33.71■■■□□ 2.99
CCDC136-211ENST00000485998 FANCD2Q9BXW9 1451 aa33.63■■■□□ 2.97
CCDC136-211ENST00000485998 TRIM41Q8WV44 630 aa33.6■■■□□ 2.97
CCDC136-211ENST00000485998 CFTRP13569 1480 aa33.55■■■□□ 2.96
CCDC136-211ENST00000485998 TOP2AP11388 1531 aaKnown RBP33.5■■■□□ 2.95
CCDC136-211ENST00000485998 RSF1Q96T23 1441 aaPredicted RBP33.48■■■□□ 2.95
CCDC136-211ENST00000485998 URB2Q14146 1524 aaKnown RBP33.42■■■□□ 2.94
CCDC136-211ENST00000485998 PRDM2Q13029 1718 aa33.31■■■□□ 2.92
CCDC136-211ENST00000485998 OSCARQ8IYS5 282 aa33.18■■■□□ 2.9
CCDC136-211ENST00000485998 ZNF608Q9ULD9 1512 aaPredicted RBP33.07■■■□□ 2.88
CCDC136-211ENST00000485998 CCDC88BA6NC98 1476 aa33.06■■■□□ 2.88
CCDC136-211ENST00000485998 IFT140Q96RY7 1462 aa33.02■■■□□ 2.88
CCDC136-211ENST00000485998 RIMBP3CA6NJZ7 1639 aa33.02■■■□□ 2.88
CCDC136-211ENST00000485998 RIMBP3BA6NNM3 1639 aa33.02■■■□□ 2.88
CCDC136-211ENST00000485998 RIMBP3Q9UFD9 1639 aa33.02■■■□□ 2.88
CCDC136-211ENST00000485998 TOPBP1Q92547 1522 aa32.98■■■□□ 2.87
CCDC136-211ENST00000485998 EIF4G3O43432 1585 aaKnown RBP32.92■■■□□ 2.86
CCDC136-211ENST00000485998 DNMBPQ6XZF7 1577 aa32.85■■■□□ 2.85
CCDC136-211ENST00000485998 ARHGEF11O15085 1522 aa32.85■■■□□ 2.85
CCDC136-211ENST00000485998 ABCC8Q09428 1581 aa32.78■■■□□ 2.84
CCDC136-211ENST00000485998 TARBP1Q13395 1621 aaKnown RBP32.75■■■□□ 2.83
CCDC136-211ENST00000485998 CHD1O14646 1710 aa32.74■■■□□ 2.83
CCDC136-211ENST00000485998 AQRO60306 1485 aaKnown RBP eCLIP32.67■■■□□ 2.82
CCDC136-211ENST00000485998 POLA1P09884 1462 aaPredicted RBP32.63■■■□□ 2.81
CCDC136-211ENST00000485998 ARAP1Q96P48 1450 aa32.53■■■□□ 2.8
CCDC136-211ENST00000485998 RAD54L2Q9Y4B4 1467 aa32.51■■■□□ 2.79
CCDC136-211ENST00000485998 CYB5RLQ6IPT4 315 aa32.47■■■□□ 2.79
CCDC136-211ENST00000485998 FBLN2P98095 1184 aa32.42■■■□□ 2.78
CCDC136-211ENST00000485998 SNAPC4Q5SXM2 1469 aa32.39■■■□□ 2.78
CCDC136-211ENST00000485998 FGD5Q6ZNL6 1462 aa32.38■■■□□ 2.77
CCDC136-211ENST00000485998 SOGA1O94964 1423 aa32.38■■■□□ 2.77
CCDC136-211ENST00000485998 TDRD9Q8NDG6 1382 aaKnown RBP32.38■■■□□ 2.77
CCDC136-211ENST00000485998 WDR97A6NE52 1622 aa32.35■■■□□ 2.77
CCDC136-211ENST00000485998 CLASP1Q7Z460 1538 aa32.33■■■□□ 2.77
CCDC136-211ENST00000485998 CUX1P39880 1505 aa32.32■■■□□ 2.76
CCDC136-211ENST00000485998 MAGI1Q96QZ7 1491 aaPredicted RBP32.23■■■□□ 2.75
CCDC136-211ENST00000485998 SYNJ1O43426 1573 aa32.23■■■□□ 2.75
CCDC136-211ENST00000485998 TRHP20396 242 aaPredicted RBP32.21■■■□□ 2.75
CCDC136-211ENST00000485998 GRIN2BQ13224 1484 aa32.18■■■□□ 2.74
CCDC136-211ENST00000485998 PBRM1Q86U86 1689 aa32.16■■■□□ 2.74
CCDC136-211ENST00000485998 SYNJ2O15056 1496 aa32.13■■■□□ 2.73
CCDC136-211ENST00000485998 CHMP7Q8WUX9 453 aaPredicted RBP32.11■■■□□ 2.73
CCDC136-211ENST00000485998 ABCA5Q8WWZ7 1642 aa32.04■■■□□ 2.72
CCDC136-211ENST00000485998 GAPVD1Q14C86 1478 aa32.03■■■□□ 2.72
CCDC136-211ENST00000485998 ABCA10Q8WWZ4 1543 aa31.98■■■□□ 2.71
CCDC136-211ENST00000485998 ADAMTS12P58397 1594 aa31.84■■■□□ 2.69
CCDC136-211ENST00000485998 ERCC6L2Q5T890 1561 aa31.83■■■□□ 2.69
CCDC136-211ENST00000485998 GRIN2AQ12879 1464 aa31.81■■■□□ 2.68
CCDC136-211ENST00000485998 CEP170Q5SW79 1584 aa31.77■■■□□ 2.68
CCDC136-211ENST00000485998 BIVM-ERCC5R4GMW8 1640 aa31.74■■■□□ 2.67
CCDC136-211ENST00000485998 NUP160Q12769 1436 aa31.71■■■□□ 2.67
CCDC136-211ENST00000485998 WRNQ14191 1432 aaPredicted RBP eCLIP31.71■■■□□ 2.67
CCDC136-211ENST00000485998 TOP2BQ02880 1626 aa31.7■■■□□ 2.66
CCDC136-211ENST00000485998 SUPT5HO00267 1087 aaKnown RBP31.66■■■□□ 2.66
CCDC136-211ENST00000485998 SHROOM2Q13796 1616 aa31.66■■■□□ 2.66
CCDC136-211ENST00000485998 FHAD1B1AJZ9 1412 aa31.59■■■□□ 2.65
CCDC136-211ENST00000485998 ERICH3Q5RHP9 1530 aa31.56■■■□□ 2.64
CCDC136-211ENST00000485998 AEBP2Q6ZN18 517 aaPredicted RBP31.47■■■□□ 2.63
CCDC136-211ENST00000485998 KIF13AQ9H1H9 1805 aa31.42■■■□□ 2.62
CCDC136-211ENST00000485998 RUSC2Q8N2Y8 1516 aa31.41■■■□□ 2.62
CCDC136-211ENST00000485998 PRG4Q92954 1404 aaPredicted RBP31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms