RNA–Protein interactions for RNA: ENST00000485939.5

BBX-225, Transcript of BBX, HMG-box containing, humanhuman

TSL 4

Gene BBX, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-225ENST00000485939 NISCHQ9Y2I1 1504 aa16.45■□□□□ 0.22
BBX-225ENST00000485939 ABCC9O60706 1549 aa15.14■□□□□ 0.01
BBX-225ENST00000485939 CCDC180Q9P1Z9 1646 aa14.82□□□□□ -0.04
BBX-225ENST00000485939 DNAJC5BQ9UF47 199 aa14.44□□□□□ -0.1
BBX-225ENST00000485939 RB1CC1Q8TDY2 1594 aa14.2□□□□□ -0.14
BBX-225ENST00000485939 PABPN1Q86U42 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
BBX-225ENST00000485939 NACADO15069 1562 aa14.03□□□□□ -0.16
BBX-225ENST00000485939 UNC13AQ9UPW8 1703 aa14.03□□□□□ -0.16
BBX-225ENST00000485939 DCAF8L2P0C7V8 631 aa13.98□□□□□ -0.17
BBX-225ENST00000485939 DNAJC5Q9H3Z4 198 aa13.95□□□□□ -0.18
BBX-225ENST00000485939 BICRAQ9NZM4 1560 aa13.92□□□□□ -0.18
BBX-225ENST00000485939 MYO15BQ96JP2 1530 aa13.71□□□□□ -0.21
BBX-225ENST00000485939 CC2D2AQ9P2K1 1620 aa13.64□□□□□ -0.23
BBX-225ENST00000485939 SCRIBQ14160 1630 aa13.61□□□□□ -0.23
BBX-225ENST00000485939 CECR2Q9BXF3 1484 aa13.61□□□□□ -0.23
BBX-225ENST00000485939 ZCCHC6Q5VYS8 1495 aaKnown RBP13.6□□□□□ -0.23
BBX-225ENST00000485939 EIF4G1Q04637 1599 aaKnown RBP13.54□□□□□ -0.24
BBX-225ENST00000485939 SHROOM4Q9ULL8 1493 aa13.5□□□□□ -0.25
BBX-225ENST00000485939 DCAF1Q9Y4B6 1507 aa13.49□□□□□ -0.25
BBX-225ENST00000485939 CUX2O14529 1486 aa13.02□□□□□ -0.33
BBX-225ENST00000485939 ERCC6Q03468 1493 aa13.01□□□□□ -0.33
BBX-225ENST00000485939 NESP48681 1621 aa12.99□□□□□ -0.33
BBX-225ENST00000485939 NCAPD3P42695 1498 aa12.97□□□□□ -0.33
BBX-225ENST00000485939 ATAD2BQ9ULI0 1458 aa12.95□□□□□ -0.34
BBX-225ENST00000485939 SMARCA4P51532 1647 aa12.91□□□□□ -0.34
BBX-225ENST00000485939 HMGXB3Q12766 1538 aa12.87□□□□□ -0.35
BBX-225ENST00000485939 THOC2Q8NI27 1593 aaKnown RBP12.86□□□□□ -0.35
BBX-225ENST00000485939 SMARCA2P51531 1590 aa12.84□□□□□ -0.35
BBX-225ENST00000485939 BAZ1BQ9UIG0 1483 aaKnown RBP12.79□□□□□ -0.36
BBX-225ENST00000485939 KIF21AQ7Z4S6 1674 aa12.79□□□□□ -0.36
BBX-225ENST00000485939 MROH2BQ7Z745 1585 aa12.74□□□□□ -0.37
BBX-225ENST00000485939 BAZ1AQ9NRL2 1556 aaPredicted RBP12.74□□□□□ -0.37
BBX-225ENST00000485939 PEG3Q9GZU2 1588 aa12.72□□□□□ -0.37
BBX-225ENST00000485939 LAMC3Q9Y6N6 1575 aa12.71□□□□□ -0.37
BBX-225ENST00000485939 TRIM41Q8WV44 630 aa12.69□□□□□ -0.38
BBX-225ENST00000485939 PDS5BQ9NTI5 1447 aa12.61□□□□□ -0.39
BBX-225ENST00000485939 WIZO95785 1651 aa12.59□□□□□ -0.39
BBX-225ENST00000485939 MRC2Q9UBG0 1479 aa12.59□□□□□ -0.39
BBX-225ENST00000485939 WDR62O43379 1518 aa12.57□□□□□ -0.4
BBX-225ENST00000485939 CADPSQ9ULU8 1353 aa12.56□□□□□ -0.4
BBX-225ENST00000485939 CEP164Q9UPV0 1460 aa12.48□□□□□ -0.41
BBX-225ENST00000485939 FANCD2Q9BXW9 1451 aa12.46□□□□□ -0.41
BBX-225ENST00000485939 URB2Q14146 1524 aaKnown RBP12.44□□□□□ -0.42
BBX-225ENST00000485939 CFTRP13569 1480 aa12.4□□□□□ -0.43
BBX-225ENST00000485939 OSCARQ8IYS5 282 aa12.36□□□□□ -0.43
BBX-225ENST00000485939 RIMBP3CA6NJZ7 1639 aa12.36□□□□□ -0.43
BBX-225ENST00000485939 RIMBP3BA6NNM3 1639 aa12.36□□□□□ -0.43
BBX-225ENST00000485939 RIMBP3Q9UFD9 1639 aa12.36□□□□□ -0.43
BBX-225ENST00000485939 RSF1Q96T23 1441 aaPredicted RBP12.35□□□□□ -0.43
BBX-225ENST00000485939 TOP2AP11388 1531 aaKnown RBP12.34□□□□□ -0.43
BBX-225ENST00000485939 ZNF608Q9ULD9 1512 aaPredicted RBP12.34□□□□□ -0.43
BBX-225ENST00000485939 PRDM2Q13029 1718 aa12.29□□□□□ -0.44
BBX-225ENST00000485939 AEBP2Q6ZN18 517 aaPredicted RBP12.28□□□□□ -0.44
BBX-225ENST00000485939 ARHGEF11O15085 1522 aa12.27□□□□□ -0.44
BBX-225ENST00000485939 ILDR1Q86SU0 546 aaPredicted RBP12.25□□□□□ -0.45
BBX-225ENST00000485939 EIF4G3O43432 1585 aaKnown RBP12.23□□□□□ -0.45
BBX-225ENST00000485939 TOPBP1Q92547 1522 aa12.22□□□□□ -0.45
BBX-225ENST00000485939 CCDC88BA6NC98 1476 aa12.22□□□□□ -0.45
BBX-225ENST00000485939 IFT140Q96RY7 1462 aa12.21□□□□□ -0.45
BBX-225ENST00000485939 CHD1O14646 1710 aa12.21□□□□□ -0.45
BBX-225ENST00000485939 ARAP1Q96P48 1450 aa12.17□□□□□ -0.46
BBX-225ENST00000485939 AQRO60306 1485 aaKnown RBP eCLIP12.16□□□□□ -0.46
BBX-225ENST00000485939 CYB5RLQ6IPT4 315 aa12.16□□□□□ -0.46
BBX-225ENST00000485939 TARBP1Q13395 1621 aaKnown RBP12.15□□□□□ -0.46
BBX-225ENST00000485939 DNMBPQ6XZF7 1577 aa12.14□□□□□ -0.47
BBX-225ENST00000485939 POLA1P09884 1462 aaPredicted RBP12.09□□□□□ -0.47
BBX-225ENST00000485939 RAD54L2Q9Y4B4 1467 aa12.09□□□□□ -0.47
BBX-225ENST00000485939 FBLN2P98095 1184 aa12.08□□□□□ -0.48
BBX-225ENST00000485939 TRHP20396 242 aaPredicted RBP12.07□□□□□ -0.48
BBX-225ENST00000485939 TDRD9Q8NDG6 1382 aaKnown RBP12.05□□□□□ -0.48
BBX-225ENST00000485939 ABCC8Q09428 1581 aa12.04□□□□□ -0.48
BBX-225ENST00000485939 SNAPC4Q5SXM2 1469 aa12.03□□□□□ -0.48
BBX-225ENST00000485939 CLASP1Q7Z460 1538 aa12.02□□□□□ -0.48
BBX-225ENST00000485939 FGD5Q6ZNL6 1462 aa12□□□□□ -0.49
BBX-225ENST00000485939 CUX1P39880 1505 aa11.98□□□□□ -0.49
BBX-225ENST00000485939 SOGA1O94964 1423 aa11.98□□□□□ -0.49
BBX-225ENST00000485939 WDR97A6NE52 1622 aa11.94□□□□□ -0.5
BBX-225ENST00000485939 SYNJ1O43426 1573 aa11.92□□□□□ -0.5
BBX-225ENST00000485939 PBRM1Q86U86 1689 aa11.92□□□□□ -0.5
BBX-225ENST00000485939 ERCC6L2Q5T890 1561 aa11.92□□□□□ -0.5
BBX-225ENST00000485939 GRIN2BQ13224 1484 aa11.9□□□□□ -0.5
BBX-225ENST00000485939 MAGI1Q96QZ7 1491 aaPredicted RBP11.9□□□□□ -0.5
BBX-225ENST00000485939 CHMP7Q8WUX9 453 aaPredicted RBP11.9□□□□□ -0.5
BBX-225ENST00000485939 SYNJ2O15056 1496 aa11.89□□□□□ -0.51
BBX-225ENST00000485939 GAPVD1Q14C86 1478 aa11.88□□□□□ -0.51
BBX-225ENST00000485939 ABCA5Q8WWZ7 1642 aa11.85□□□□□ -0.51
BBX-225ENST00000485939 CEP170Q5SW79 1584 aa11.8□□□□□ -0.52
BBX-225ENST00000485939 ABCA10Q8WWZ4 1543 aa11.8□□□□□ -0.52
BBX-225ENST00000485939 ADAMTS12P58397 1594 aa11.78□□□□□ -0.52
BBX-225ENST00000485939 GRIN2AQ12879 1464 aa11.77□□□□□ -0.52
BBX-225ENST00000485939 KIF13AQ9H1H9 1805 aa11.75□□□□□ -0.53
BBX-225ENST00000485939 NUP160Q12769 1436 aa11.74□□□□□ -0.53
BBX-225ENST00000485939 SHROOM2Q13796 1616 aa11.73□□□□□ -0.53
BBX-225ENST00000485939 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
BBX-225ENST00000485939 WRNQ14191 1432 aaPredicted RBP eCLIP11.67□□□□□ -0.54
BBX-225ENST00000485939 TOP2BQ02880 1626 aa11.67□□□□□ -0.54
BBX-225ENST00000485939 SUPT5HO00267 1087 aaKnown RBP11.66□□□□□ -0.54
BBX-225ENST00000485939 FHAD1B1AJZ9 1412 aa11.66□□□□□ -0.54
BBX-225ENST00000485939 PRG4Q92954 1404 aaPredicted RBP11.65□□□□□ -0.54
BBX-225ENST00000485939 ERICH3Q5RHP9 1530 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms