RNA–Protein interactions for RNA: ENST00000485648.5

PMM1-208, Transcript of phosphomannomutase 1, humanhuman

TSL 5

Gene PMM1, Length 1,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM1-208ENST00000485648 NISCHQ9Y2I1 1504 aa32.96■■■□□ 2.87
PMM1-208ENST00000485648 CCDC180Q9P1Z9 1646 aa29■■■□□ 2.23
PMM1-208ENST00000485648 ABCC9O60706 1549 aa27.84■■■□□ 2.05
PMM1-208ENST00000485648 ZCCHC6Q5VYS8 1495 aaKnown RBP27.57■■■□□ 2
PMM1-208ENST00000485648 DCAF8L2P0C7V8 631 aa27.5■■□□□ 1.99
PMM1-208ENST00000485648 DCAF1Q9Y4B6 1507 aa27.27■■□□□ 1.96
PMM1-208ENST00000485648 NACADO15069 1562 aa27.15■■□□□ 1.94
PMM1-208ENST00000485648 MYO15BQ96JP2 1530 aa27.13■■□□□ 1.93
PMM1-208ENST00000485648 RB1CC1Q8TDY2 1594 aa27.05■■□□□ 1.92
PMM1-208ENST00000485648 SCRIBQ14160 1630 aa26.58■■□□□ 1.85
PMM1-208ENST00000485648 SHROOM4Q9ULL8 1493 aa26.57■■□□□ 1.84
PMM1-208ENST00000485648 UNC13AQ9UPW8 1703 aa26.33■■□□□ 1.81
PMM1-208ENST00000485648 PABPN1Q86U42 306 aaKnown RBP eCLIP26.14■■□□□ 1.78
PMM1-208ENST00000485648 BICRAQ9NZM4 1560 aa26.08■■□□□ 1.77
PMM1-208ENST00000485648 CECR2Q9BXF3 1484 aa25.59■■□□□ 1.69
PMM1-208ENST00000485648 BAZ1AQ9NRL2 1556 aaPredicted RBP25.54■■□□□ 1.68
PMM1-208ENST00000485648 SMARCA4P51532 1647 aa25.43■■□□□ 1.66
PMM1-208ENST00000485648 EIF4G1Q04637 1599 aaKnown RBP25.41■■□□□ 1.66
PMM1-208ENST00000485648 MROH2BQ7Z745 1585 aa25.41■■□□□ 1.66
PMM1-208ENST00000485648 SUPT5HO00267 1087 aaKnown RBP25.39■■□□□ 1.66
PMM1-208ENST00000485648 RSF1Q96T23 1441 aaPredicted RBP25.36■■□□□ 1.65
PMM1-208ENST00000485648 SMARCA2P51531 1590 aa25.18■■□□□ 1.62
PMM1-208ENST00000485648 WIZO95785 1651 aa25.18■■□□□ 1.62
PMM1-208ENST00000485648 CC2D2AQ9P2K1 1620 aa25.15■■□□□ 1.62
PMM1-208ENST00000485648 ATAD2BQ9ULI0 1458 aa25.14■■□□□ 1.62
PMM1-208ENST00000485648 PEG3Q9GZU2 1588 aa25.12■■□□□ 1.61
PMM1-208ENST00000485648 BAZ1BQ9UIG0 1483 aaKnown RBP25.03■■□□□ 1.6
PMM1-208ENST00000485648 NCAPD3P42695 1498 aa25.01■■□□□ 1.59
PMM1-208ENST00000485648 TOP2AP11388 1531 aaKnown RBP24.97■■□□□ 1.59
PMM1-208ENST00000485648 HMGXB3Q12766 1538 aa24.96■■□□□ 1.59
PMM1-208ENST00000485648 DNAJC5BQ9UF47 199 aa24.86■■□□□ 1.57
PMM1-208ENST00000485648 CCDC88BA6NC98 1476 aa24.67■■□□□ 1.54
PMM1-208ENST00000485648 CADPSQ9ULU8 1353 aa24.37■■□□□ 1.49
PMM1-208ENST00000485648 CFTRP13569 1480 aa24.32■■□□□ 1.48
PMM1-208ENST00000485648 LAMC3Q9Y6N6 1575 aa24.28■■□□□ 1.48
PMM1-208ENST00000485648 NESP48681 1621 aa24.23■■□□□ 1.47
PMM1-208ENST00000485648 PRDM2Q13029 1718 aa24.17■■□□□ 1.46
PMM1-208ENST00000485648 PDS5BQ9NTI5 1447 aa24.15■■□□□ 1.46
PMM1-208ENST00000485648 FANCD2Q9BXW9 1451 aa24.09■■□□□ 1.45
PMM1-208ENST00000485648 CEP164Q9UPV0 1460 aa24.02■■□□□ 1.44
PMM1-208ENST00000485648 ERCC6Q03468 1493 aa24.01■■□□□ 1.43
PMM1-208ENST00000485648 CHIC1Q5VXU3 224 aa24■■□□□ 1.43
PMM1-208ENST00000485648 ABCC8Q09428 1581 aa23.97■■□□□ 1.43
PMM1-208ENST00000485648 WRNQ14191 1432 aaPredicted RBP eCLIP23.96■■□□□ 1.439e-6■■■■■ 50.1
PMM1-208ENST00000485648 KIF21AQ7Z4S6 1674 aa23.95■■□□□ 1.42
PMM1-208ENST00000485648 TRIM41Q8WV44 630 aa23.94■■□□□ 1.42
PMM1-208ENST00000485648 MRC2Q9UBG0 1479 aa23.83■■□□□ 1.41
PMM1-208ENST00000485648 CUX1P39880 1505 aa23.8■■□□□ 1.4
PMM1-208ENST00000485648 SYNJ1O43426 1573 aa23.79■■□□□ 1.4
PMM1-208ENST00000485648 DNMBPQ6XZF7 1577 aa23.79■■□□□ 1.4
PMM1-208ENST00000485648 TOP2BQ02880 1626 aa23.78■■□□□ 1.4
PMM1-208ENST00000485648 TOPBP1Q92547 1522 aa23.77■■□□□ 1.4
PMM1-208ENST00000485648 URB2Q14146 1524 aaKnown RBP23.76■■□□□ 1.39
PMM1-208ENST00000485648 BIVM-ERCC5R4GMW8 1640 aa23.76■■□□□ 1.39
PMM1-208ENST00000485648 THOC2Q8NI27 1593 aaKnown RBP23.68■■□□□ 1.38
PMM1-208ENST00000485648 WDR62O43379 1518 aa23.68■■□□□ 1.38
PMM1-208ENST00000485648 FGD5Q6ZNL6 1462 aa23.66■■□□□ 1.38
PMM1-208ENST00000485648 POLA1P09884 1462 aaPredicted RBP23.6■■□□□ 1.37
PMM1-208ENST00000485648 SOGA1O94964 1423 aa23.58■■□□□ 1.36
PMM1-208ENST00000485648 RAD54L2Q9Y4B4 1467 aa23.5■■□□□ 1.35
PMM1-208ENST00000485648 IFT140Q96RY7 1462 aa23.48■■□□□ 1.35
PMM1-208ENST00000485648 FAM9AQ8IZU1 332 aaPredicted RBP23.46■■□□□ 1.35
PMM1-208ENST00000485648 CUX2O14529 1486 aa23.45■■□□□ 1.34
PMM1-208ENST00000485648 ABCA10Q8WWZ4 1543 aa23.44■■□□□ 1.34
PMM1-208ENST00000485648 KIF27Q86VH2 1401 aa23.43■■□□□ 1.34
PMM1-208ENST00000485648 EEA1Q15075 1411 aa23.42■■□□□ 1.34
PMM1-208ENST00000485648 TARBP1Q13395 1621 aaKnown RBP23.4■■□□□ 1.34
PMM1-208ENST00000485648 TDRD9Q8NDG6 1382 aaKnown RBP23.36■■□□□ 1.33
PMM1-208ENST00000485648 WDR97A6NE52 1622 aa23.35■■□□□ 1.33
PMM1-208ENST00000485648 RUSC2Q8N2Y8 1516 aa23.34■■□□□ 1.33
PMM1-208ENST00000485648 CSRNP3Q8WYN3 585 aa23.32■■□□□ 1.32
PMM1-208ENST00000485648 GAPVD1Q14C86 1478 aa23.3■■□□□ 1.32
PMM1-208ENST00000485648 ZNF608Q9ULD9 1512 aaPredicted RBP23.27■■□□□ 1.32
PMM1-208ENST00000485648 AQRO60306 1485 aaKnown RBP eCLIP23.26■■□□□ 1.311e-7■■■■■ 37.4
PMM1-208ENST00000485648 ABCA5Q8WWZ7 1642 aa23.26■■□□□ 1.31
PMM1-208ENST00000485648 EIF4G3O43432 1585 aaKnown RBP23.21■■□□□ 1.31
PMM1-208ENST00000485648 GRIN2BQ13224 1484 aa23.2■■□□□ 1.3
PMM1-208ENST00000485648 IGF1RP08069 1367 aa23.2■■□□□ 1.3
PMM1-208ENST00000485648 ERICH3Q5RHP9 1530 aa23.17■■□□□ 1.3
PMM1-208ENST00000485648 PBRM1Q86U86 1689 aa23.16■■□□□ 1.3
PMM1-208ENST00000485648 EHMT2Q96KQ7 1210 aa23.14■■□□□ 1.29
PMM1-208ENST00000485648 CARMIL1Q5VZK9 1371 aa23.12■■□□□ 1.29
PMM1-208ENST00000485648 CUL7Q14999 1698 aa23.11■■□□□ 1.29
PMM1-208ENST00000485648 SNAPC4Q5SXM2 1469 aa23.07■■□□□ 1.28
PMM1-208ENST00000485648 KIF21BO75037 1637 aa23.07■■□□□ 1.28
PMM1-208ENST00000485648 PRXQ9BXM0 1461 aa23.06■■□□□ 1.28
PMM1-208ENST00000485648 GOLGA3Q08378 1498 aa23.06■■□□□ 1.28
PMM1-208ENST00000485648 MAGI1Q96QZ7 1491 aaPredicted RBP23.06■■□□□ 1.28
PMM1-208ENST00000485648 RAPGEF2Q9Y4G8 1499 aa23.06■■□□□ 1.28
PMM1-208ENST00000485648 FHAD1B1AJZ9 1412 aa23.05■■□□□ 1.28
PMM1-208ENST00000485648 LOC105371045A0A1W2PR82 267 aa23.04■■□□□ 1.28
PMM1-208ENST00000485648 UBTFP17480 764 aaKnown RBP23.03■■□□□ 1.28
PMM1-208ENST00000485648 ADAMTS12P58397 1594 aa23.01■■□□□ 1.27
PMM1-208ENST00000485648 FBLN2P98095 1184 aa23■■□□□ 1.27
PMM1-208ENST00000485648 CHMP7Q8WUX9 453 aaPredicted RBP23■■□□□ 1.27
PMM1-208ENST00000485648 SYNJ2O15056 1496 aa22.96■■□□□ 1.27
PMM1-208ENST00000485648 GRIN2AQ12879 1464 aa22.88■■□□□ 1.25
PMM1-208ENST00000485648 TNIKQ9UKE5 1360 aa22.87■■□□□ 1.25
PMM1-208ENST00000485648 CHD1O14646 1710 aa22.8■■□□□ 1.24
PMM1-208ENST00000485648 RANGAP1P46060 587 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms