RNA–Protein interactions for RNA: ENST00000485508.5

GABBR1-213, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5

Gene GABBR1, Length 825 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-213ENST00000485508 NISCHQ9Y2I1 1504 aa54.03■■■■■ 6.24
GABBR1-213ENST00000485508 CCDC180Q9P1Z9 1646 aa48.09■■■■■ 5.29
GABBR1-213ENST00000485508 ABCC9O60706 1549 aa46.94■■■■■ 5.1
GABBR1-213ENST00000485508 RB1CC1Q8TDY2 1594 aa45.2■■■■■ 4.83
GABBR1-213ENST00000485508 NACADO15069 1562 aa45.16■■■■■ 4.82
GABBR1-213ENST00000485508 ZCCHC6Q5VYS8 1495 aaKnown RBP45.04■■■■■ 4.8
GABBR1-213ENST00000485508 DCAF8L2P0C7V8 631 aa45■■■■■ 4.79
GABBR1-213ENST00000485508 MYO15BQ96JP2 1530 aa44.9■■■■■ 4.78
GABBR1-213ENST00000485508 DCAF1Q9Y4B6 1507 aa44.72■■■■■ 4.75
GABBR1-213ENST00000485508 UNC13AQ9UPW8 1703 aa44.28■■■■■ 4.68
GABBR1-213ENST00000485508 BICRAQ9NZM4 1560 aa43.86■■■■■ 4.61
GABBR1-213ENST00000485508 SCRIBQ14160 1630 aa43.83■■■■■ 4.61
GABBR1-213ENST00000485508 PABPN1Q86U42 306 aaKnown RBP eCLIP43.81■■■■■ 4.6
GABBR1-213ENST00000485508 SHROOM4Q9ULL8 1493 aa43.38■■■■■ 4.53
GABBR1-213ENST00000485508 DNAJC5BQ9UF47 199 aa43.02■■■■■ 4.48
GABBR1-213ENST00000485508 EIF4G1Q04637 1599 aaKnown RBP42.68■■■■■ 4.42
GABBR1-213ENST00000485508 CC2D2AQ9P2K1 1620 aa42.5■■■■■ 4.39
GABBR1-213ENST00000485508 CECR2Q9BXF3 1484 aa42.17■■■■■ 4.34
GABBR1-213ENST00000485508 SMARCA4P51532 1647 aa41.95■■■■■ 4.31
GABBR1-213ENST00000485508 BAZ1AQ9NRL2 1556 aaPredicted RBP41.88■■■■■ 4.29
GABBR1-213ENST00000485508 ATAD2BQ9ULI0 1458 aa41.67■■■■■ 4.26
GABBR1-213ENST00000485508 MROH2BQ7Z745 1585 aa41.64■■■■■ 4.26
GABBR1-213ENST00000485508 NCAPD3P42695 1498 aa41.64■■■■■ 4.26
GABBR1-213ENST00000485508 SMARCA2P51531 1590 aa41.63■■■■■ 4.26
GABBR1-213ENST00000485508 PEG3Q9GZU2 1588 aa41.54■■■■■ 4.24
GABBR1-213ENST00000485508 HMGXB3Q12766 1538 aa41.47■■■■■ 4.23
GABBR1-213ENST00000485508 BAZ1BQ9UIG0 1483 aaKnown RBP41.32■■■■■ 4.2
GABBR1-213ENST00000485508 WIZO95785 1651 aa41.23■■■■■ 4.19
GABBR1-213ENST00000485508 RSF1Q96T23 1441 aaPredicted RBP41.15■■■■■ 4.18
GABBR1-213ENST00000485508 TOP2AP11388 1531 aaKnown RBP40.77■■■■■ 4.12
GABBR1-213ENST00000485508 NESP48681 1621 aa40.64■■■■■ 4.1
GABBR1-213ENST00000485508 LAMC3Q9Y6N6 1575 aa40.57■■■■■ 4.08
GABBR1-213ENST00000485508 ERCC6Q03468 1493 aa40.42■■■■■ 4.06
GABBR1-213ENST00000485508 CADPSQ9ULU8 1353 aa40.4■■■■■ 4.06
GABBR1-213ENST00000485508 CCDC88BA6NC98 1476 aa40.26■■■■■ 4.04
GABBR1-213ENST00000485508 KIF21AQ7Z4S6 1674 aa40.23■■■■■ 4.03
GABBR1-213ENST00000485508 PDS5BQ9NTI5 1447 aa40.23■■■■■ 4.03
GABBR1-213ENST00000485508 CFTRP13569 1480 aa40.19■■■■■ 4.03
GABBR1-213ENST00000485508 THOC2Q8NI27 1593 aaKnown RBP40.08■■■■■ 4.01
GABBR1-213ENST00000485508 SUPT5HO00267 1087 aaKnown RBP40.06■■■■■ 4
GABBR1-213ENST00000485508 PRDM2Q13029 1718 aa40.02■■■■■ 4
GABBR1-213ENST00000485508 CUX2O14529 1486 aa40.02■■■■■ 4
GABBR1-213ENST00000485508 FANCD2Q9BXW9 1451 aa39.96■■■■□ 3.99
GABBR1-213ENST00000485508 CEP164Q9UPV0 1460 aa39.92■■■■□ 3.98
GABBR1-213ENST00000485508 MRC2Q9UBG0 1479 aa39.86■■■■□ 3.97
GABBR1-213ENST00000485508 WDR62O43379 1518 aa39.75■■■■□ 3.95
GABBR1-213ENST00000485508 URB2Q14146 1524 aaKnown RBP39.58■■■■□ 3.93
GABBR1-213ENST00000485508 TOPBP1Q92547 1522 aa39.35■■■■□ 3.89
GABBR1-213ENST00000485508 ABCC8Q09428 1581 aa39.32■■■■□ 3.88
GABBR1-213ENST00000485508 DNMBPQ6XZF7 1577 aa39.32■■■■□ 3.88
GABBR1-213ENST00000485508 IFT140Q96RY7 1462 aa39.07■■■■□ 3.85
GABBR1-213ENST00000485508 CUX1P39880 1505 aa39.07■■■■□ 3.84
GABBR1-213ENST00000485508 POLA1P09884 1462 aaPredicted RBP39.01■■■■□ 3.84
GABBR1-213ENST00000485508 TARBP1Q13395 1621 aaKnown RBP38.95■■■■□ 3.83
GABBR1-213ENST00000485508 FGD5Q6ZNL6 1462 aa38.92■■■■□ 3.82
GABBR1-213ENST00000485508 ZNF608Q9ULD9 1512 aaPredicted RBP38.9■■■■□ 3.82
GABBR1-213ENST00000485508 RAD54L2Q9Y4B4 1467 aa38.83■■■■□ 3.81
GABBR1-213ENST00000485508 SOGA1O94964 1423 aa38.81■■■■□ 3.8
GABBR1-213ENST00000485508 WRNQ14191 1432 aaPredicted RBP eCLIP38.8■■■■□ 3.8
GABBR1-213ENST00000485508 EIF4G3O43432 1585 aaKnown RBP38.79■■■■□ 3.8
GABBR1-213ENST00000485508 BIVM-ERCC5R4GMW8 1640 aa38.78■■■■□ 3.8
GABBR1-213ENST00000485508 TOP2BQ02880 1626 aa38.75■■■■□ 3.79
GABBR1-213ENST00000485508 SYNJ1O43426 1573 aa38.75■■■■□ 3.79
GABBR1-213ENST00000485508 DNAJC5Q9H3Z4 198 aa38.71■■■■□ 3.79
GABBR1-213ENST00000485508 WDR97A6NE52 1622 aa38.68■■■■□ 3.78
GABBR1-213ENST00000485508 AQRO60306 1485 aaKnown RBP eCLIP38.66■■■■□ 3.782e-12■■■■■ 53.6
GABBR1-213ENST00000485508 TDRD9Q8NDG6 1382 aaKnown RBP38.58■■■■□ 3.77
GABBR1-213ENST00000485508 ABCA10Q8WWZ4 1543 aa38.55■■■■□ 3.76
GABBR1-213ENST00000485508 ABCA5Q8WWZ7 1642 aa38.44■■■■□ 3.74
GABBR1-213ENST00000485508 PBRM1Q86U86 1689 aa38.39■■■■□ 3.74
GABBR1-213ENST00000485508 GAPVD1Q14C86 1478 aa38.38■■■■□ 3.73
GABBR1-213ENST00000485508 GRIN2BQ13224 1484 aa38.37■■■■□ 3.73
GABBR1-213ENST00000485508 CHD1O14646 1710 aa38.33■■■■□ 3.73
GABBR1-213ENST00000485508 SNAPC4Q5SXM2 1469 aa38.33■■■■□ 3.73
GABBR1-213ENST00000485508 OSCARQ8IYS5 282 aa38.3■■■■□ 3.72
GABBR1-213ENST00000485508 MAGI1Q96QZ7 1491 aaPredicted RBP38.28■■■■□ 3.72
GABBR1-213ENST00000485508 SYNJ2O15056 1496 aa38.13■■■■□ 3.69
GABBR1-213ENST00000485508 FBLN2P98095 1184 aa38.12■■■■□ 3.69
GABBR1-213ENST00000485508 ERICH3Q5RHP9 1530 aa38.09■■■■□ 3.69
GABBR1-213ENST00000485508 ADAMTS12P58397 1594 aa38.06■■■■□ 3.68
GABBR1-213ENST00000485508 CHMP7Q8WUX9 453 aaPredicted RBP38.04■■■■□ 3.68
GABBR1-213ENST00000485508 KIF27Q86VH2 1401 aa37.97■■■■□ 3.67
GABBR1-213ENST00000485508 FHAD1B1AJZ9 1412 aa37.94■■■■□ 3.66
GABBR1-213ENST00000485508 GRIN2AQ12879 1464 aa37.9■■■■□ 3.66
GABBR1-213ENST00000485508 CLASP1Q7Z460 1538 aa37.88■■■■□ 3.65
GABBR1-213ENST00000485508 TRIM41Q8WV44 630 aa37.84■■■■□ 3.65
GABBR1-213ENST00000485508 IGF1RP08069 1367 aa37.8■■■■□ 3.64
GABBR1-213ENST00000485508 RIMBP3CA6NJZ7 1639 aa37.79■■■■□ 3.64
GABBR1-213ENST00000485508 RIMBP3BA6NNM3 1639 aa37.79■■■■□ 3.64
GABBR1-213ENST00000485508 RIMBP3Q9UFD9 1639 aa37.79■■■■□ 3.64
GABBR1-213ENST00000485508 CUL7Q14999 1698 aa37.78■■■■□ 3.64
GABBR1-213ENST00000485508 ARHGEF11O15085 1522 aa37.77■■■■□ 3.64
GABBR1-213ENST00000485508 CEP170Q5SW79 1584 aa37.74■■■■□ 3.63
GABBR1-213ENST00000485508 NUP160Q12769 1436 aa37.73■■■■□ 3.63
GABBR1-213ENST00000485508 RUSC2Q8N2Y8 1516 aa37.67■■■■□ 3.62
GABBR1-213ENST00000485508 CARMIL1Q5VZK9 1371 aa37.58■■■■□ 3.61
GABBR1-213ENST00000485508 SHROOM2Q13796 1616 aa37.5■■■■□ 3.59
GABBR1-213ENST00000485508 ARAP1Q96P48 1450 aa37.46■■■■□ 3.59
GABBR1-213ENST00000485508 CHIC1Q5VXU3 224 aa37.43■■■■□ 3.58
GABBR1-213ENST00000485508 RAPGEF2Q9Y4G8 1499 aa37.39■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms