RNA–Protein interactions for RNA: ENST00000485449.1

CBX8-204, Transcript of chromobox 8, humanhuman

TSL 3

Gene CBX8, Length 581 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8-204ENST00000485449 NISCHQ9Y2I1 1504 aa47.06■■■■■ 5.12
CBX8-204ENST00000485449 CCDC180Q9P1Z9 1646 aa41.83■■■■■ 4.29
CBX8-204ENST00000485449 ABCC9O60706 1549 aa40.7■■■■■ 4.11
CBX8-204ENST00000485449 RB1CC1Q8TDY2 1594 aa39.26■■■■□ 3.88
CBX8-204ENST00000485449 NACADO15069 1562 aa39.25■■■■□ 3.87
CBX8-204ENST00000485449 ZCCHC6Q5VYS8 1495 aaKnown RBP39.24■■■■□ 3.87
CBX8-204ENST00000485449 DCAF8L2P0C7V8 631 aa39.2■■■■□ 3.87
CBX8-204ENST00000485449 MYO15BQ96JP2 1530 aa39.06■■■■□ 3.84
CBX8-204ENST00000485449 DCAF1Q9Y4B6 1507 aa38.96■■■■□ 3.83
CBX8-204ENST00000485449 UNC13AQ9UPW8 1703 aa38.44■■■■□ 3.74
CBX8-204ENST00000485449 SCRIBQ14160 1630 aa38.13■■■■□ 3.69
CBX8-204ENST00000485449 BICRAQ9NZM4 1560 aa38.08■■■■□ 3.69
CBX8-204ENST00000485449 PABPN1Q86U42 306 aaKnown RBP eCLIP38.03■■■■□ 3.68
CBX8-204ENST00000485449 SHROOM4Q9ULL8 1493 aa37.67■■■■□ 3.62
CBX8-204ENST00000485449 DNAJC5BQ9UF47 199 aa37.2■■■■□ 3.55
CBX8-204ENST00000485449 EIF4G1Q04637 1599 aaKnown RBP37.04■■■■□ 3.52
CBX8-204ENST00000485449 CC2D2AQ9P2K1 1620 aa36.86■■■■□ 3.49
CBX8-204ENST00000485449 CECR2Q9BXF3 1484 aa36.62■■■■□ 3.45
CBX8-204ENST00000485449 SMARCA4P51532 1647 aa36.51■■■■□ 3.43
CBX8-204ENST00000485449 BAZ1AQ9NRL2 1556 aaPredicted RBP36.47■■■■□ 3.43
CBX8-204ENST00000485449 MROH2BQ7Z745 1585 aa36.27■■■■□ 3.4
CBX8-204ENST00000485449 ATAD2BQ9ULI0 1458 aa36.23■■■■□ 3.39
CBX8-204ENST00000485449 SMARCA2P51531 1590 aa36.22■■■■□ 3.39
CBX8-204ENST00000485449 NCAPD3P42695 1498 aa36.19■■■■□ 3.38
CBX8-204ENST00000485449 PEG3Q9GZU2 1588 aa36.15■■■■□ 3.38
CBX8-204ENST00000485449 HMGXB3Q12766 1538 aa36.05■■■■□ 3.36
CBX8-204ENST00000485449 BAZ1BQ9UIG0 1483 aaKnown RBP35.95■■■■□ 3.35
CBX8-204ENST00000485449 WIZO95785 1651 aa35.92■■■■□ 3.34
CBX8-204ENST00000485449 RSF1Q96T23 1441 aaPredicted RBP35.9■■■■□ 3.34
CBX8-204ENST00000485449 TOP2AP11388 1531 aaKnown RBP35.52■■■■□ 3.28
CBX8-204ENST00000485449 NESP48681 1621 aa35.28■■■■□ 3.24
CBX8-204ENST00000485449 LAMC3Q9Y6N6 1575 aa35.24■■■■□ 3.23
CBX8-204ENST00000485449 CADPSQ9ULU8 1353 aa35.13■■■■□ 3.21
CBX8-204ENST00000485449 CCDC88BA6NC98 1476 aa35.09■■■■□ 3.21
CBX8-204ENST00000485449 SUPT5HO00267 1087 aaKnown RBP35.07■■■■□ 3.2
CBX8-204ENST00000485449 ERCC6Q03468 1493 aa35.07■■■■□ 3.2
CBX8-204ENST00000485449 CFTRP13569 1480 aa34.97■■■■□ 3.19
CBX8-204ENST00000485449 PDS5BQ9NTI5 1447 aa34.96■■■■□ 3.19
CBX8-204ENST00000485449 KIF21AQ7Z4S6 1674 aa34.93■■■■□ 3.18
CBX8-204ENST00000485449 PRDM2Q13029 1718 aa34.82■■■■□ 3.16
CBX8-204ENST00000485449 THOC2Q8NI27 1593 aaKnown RBP34.74■■■■□ 3.15
CBX8-204ENST00000485449 FANCD2Q9BXW9 1451 aa34.74■■■■□ 3.15
CBX8-204ENST00000485449 CEP164Q9UPV0 1460 aa34.69■■■■□ 3.14
CBX8-204ENST00000485449 CUX2O14529 1486 aa34.65■■■■□ 3.14
CBX8-204ENST00000485449 MRC2Q9UBG0 1479 aa34.6■■■■□ 3.13
CBX8-204ENST00000485449 WDR62O43379 1518 aa34.5■■■■□ 3.11
CBX8-204ENST00000485449 URB2Q14146 1524 aaKnown RBP34.4■■■■□ 3.1
CBX8-204ENST00000485449 ABCC8Q09428 1581 aa34.23■■■■□ 3.07
CBX8-204ENST00000485449 TOPBP1Q92547 1522 aa34.21■■■■□ 3.07
CBX8-204ENST00000485449 DNMBPQ6XZF7 1577 aa34.2■■■■□ 3.07
CBX8-204ENST00000485449 CUX1P39880 1505 aa34.02■■■■□ 3.04
CBX8-204ENST00000485449 IFT140Q96RY7 1462 aa33.95■■■■□ 3.02
CBX8-204ENST00000485449 POLA1P09884 1462 aaPredicted RBP33.93■■■■□ 3.02
CBX8-204ENST00000485449 FGD5Q6ZNL6 1462 aa33.88■■■■□ 3.01
CBX8-204ENST00000485449 TARBP1Q13395 1621 aaKnown RBP33.86■■■■□ 3.01
CBX8-204ENST00000485449 WRNQ14191 1432 aaPredicted RBP eCLIP33.84■■■■□ 3.01
CBX8-204ENST00000485449 BIVM-ERCC5R4GMW8 1640 aa33.81■■■■□ 3
CBX8-204ENST00000485449 TOP2BQ02880 1626 aa33.79■■■■□ 3
CBX8-204ENST00000485449 ZNF608Q9ULD9 1512 aaPredicted RBP33.79■■■■□ 3
CBX8-204ENST00000485449 SYNJ1O43426 1573 aa33.78■■■■□ 3
CBX8-204ENST00000485449 SOGA1O94964 1423 aa33.78■■■■□ 3
CBX8-204ENST00000485449 RAD54L2Q9Y4B4 1467 aa33.77■■■■□ 3
CBX8-204ENST00000485449 EIF4G3O43432 1585 aaKnown RBP33.7■■■□□ 2.99
CBX8-204ENST00000485449 WDR97A6NE52 1622 aa33.64■■■□□ 2.98
CBX8-204ENST00000485449 AQRO60306 1485 aaKnown RBP eCLIP33.61■■■□□ 2.971e-7■■■■■ 31.7
CBX8-204ENST00000485449 TDRD9Q8NDG6 1382 aaKnown RBP33.56■■■□□ 2.96
CBX8-204ENST00000485449 ABCA10Q8WWZ4 1543 aa33.55■■■□□ 2.96
CBX8-204ENST00000485449 ABCA5Q8WWZ7 1642 aa33.44■■■□□ 2.94
CBX8-204ENST00000485449 GAPVD1Q14C86 1478 aa33.4■■■□□ 2.94
CBX8-204ENST00000485449 PBRM1Q86U86 1689 aa33.39■■■□□ 2.94
CBX8-204ENST00000485449 DNAJC5Q9H3Z4 198 aa33.38■■■□□ 2.93
CBX8-204ENST00000485449 GRIN2BQ13224 1484 aa33.37■■■□□ 2.93
CBX8-204ENST00000485449 SNAPC4Q5SXM2 1469 aa33.31■■■□□ 2.92
CBX8-204ENST00000485449 MAGI1Q96QZ7 1491 aaPredicted RBP33.28■■■□□ 2.92
CBX8-204ENST00000485449 CHD1O14646 1710 aa33.28■■■□□ 2.92
CBX8-204ENST00000485449 OSCARQ8IYS5 282 aa33.22■■■□□ 2.91
CBX8-204ENST00000485449 ERICH3Q5RHP9 1530 aa33.17■■■□□ 2.9
CBX8-204ENST00000485449 SYNJ2O15056 1496 aa33.15■■■□□ 2.9
CBX8-204ENST00000485449 FBLN2P98095 1184 aa33.15■■■□□ 2.9
CBX8-204ENST00000485449 TRIM41Q8WV44 630 aa33.13■■■□□ 2.89
CBX8-204ENST00000485449 KIF27Q86VH2 1401 aa33.11■■■□□ 2.89
CBX8-204ENST00000485449 ADAMTS12P58397 1594 aa33.09■■■□□ 2.89
CBX8-204ENST00000485449 CHMP7Q8WUX9 453 aaPredicted RBP33.09■■■□□ 2.89
CBX8-204ENST00000485449 FHAD1B1AJZ9 1412 aa33.02■■■□□ 2.88
CBX8-204ENST00000485449 IGF1RP08069 1367 aa32.96■■■□□ 2.87
CBX8-204ENST00000485449 GRIN2AQ12879 1464 aa32.95■■■□□ 2.87
CBX8-204ENST00000485449 CUL7Q14999 1698 aa32.93■■■□□ 2.86
CBX8-204ENST00000485449 CLASP1Q7Z460 1538 aa32.87■■■□□ 2.85
CBX8-204ENST00000485449 RUSC2Q8N2Y8 1516 aa32.87■■■□□ 2.85
CBX8-204ENST00000485449 CHIC1Q5VXU3 224 aa32.83■■■□□ 2.85
CBX8-204ENST00000485449 CEP170Q5SW79 1584 aa32.8■■■□□ 2.84
CBX8-204ENST00000485449 NUP160Q12769 1436 aa32.79■■■□□ 2.84
CBX8-204ENST00000485449 CARMIL1Q5VZK9 1371 aa32.76■■■□□ 2.83
CBX8-204ENST00000485449 RIMBP3CA6NJZ7 1639 aa32.73■■■□□ 2.83
CBX8-204ENST00000485449 RIMBP3BA6NNM3 1639 aa32.73■■■□□ 2.83
CBX8-204ENST00000485449 RIMBP3Q9UFD9 1639 aa32.73■■■□□ 2.83
CBX8-204ENST00000485449 ARHGEF11O15085 1522 aa32.72■■■□□ 2.83
CBX8-204ENST00000485449 RAPGEF2Q9Y4G8 1499 aa32.61■■■□□ 2.81
CBX8-204ENST00000485449 EEA1Q15075 1411 aa32.59■■■□□ 2.81
CBX8-204ENST00000485449 SHROOM2Q13796 1616 aa32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms