RNA–Protein interactions for RNA: ENST00000485373.5

RTCB-204, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 4

Gene RTCB, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-204ENST00000485373 NISCHQ9Y2I1 1504 aa21.9■■□□□ 1.1
RTCB-204ENST00000485373 CCDC180Q9P1Z9 1646 aa19.45■□□□□ 0.7
RTCB-204ENST00000485373 ABCC9O60706 1549 aa18.94■□□□□ 0.62
RTCB-204ENST00000485373 DCAF8L2P0C7V8 631 aa18.32■□□□□ 0.52
RTCB-204ENST00000485373 ZCCHC6Q5VYS8 1495 aaKnown RBP18.28■□□□□ 0.52
RTCB-204ENST00000485373 RB1CC1Q8TDY2 1594 aa18.25■□□□□ 0.51
RTCB-204ENST00000485373 NACADO15069 1562 aa18.25■□□□□ 0.51
RTCB-204ENST00000485373 MYO15BQ96JP2 1530 aa18.13■□□□□ 0.49
RTCB-204ENST00000485373 DCAF1Q9Y4B6 1507 aa18.11■□□□□ 0.49
RTCB-204ENST00000485373 UNC13AQ9UPW8 1703 aa17.86■□□□□ 0.45
RTCB-204ENST00000485373 SCRIBQ14160 1630 aa17.8■□□□□ 0.44
RTCB-204ENST00000485373 PABPN1Q86U42 306 aaKnown RBP eCLIP17.7■□□□□ 0.42
RTCB-204ENST00000485373 BICRAQ9NZM4 1560 aa17.66■□□□□ 0.42
RTCB-204ENST00000485373 SHROOM4Q9ULL8 1493 aa17.49■□□□□ 0.39
RTCB-204ENST00000485373 EIF4G1Q04637 1599 aaKnown RBP17.21■□□□□ 0.35
RTCB-204ENST00000485373 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
RTCB-204ENST00000485373 CC2D2AQ9P2K1 1620 aa17.12■□□□□ 0.33
RTCB-204ENST00000485373 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
RTCB-204ENST00000485373 SMARCA4P51532 1647 aa17■□□□□ 0.31
RTCB-204ENST00000485373 BAZ1AQ9NRL2 1556 aaPredicted RBP16.99■□□□□ 0.31
RTCB-204ENST00000485373 MROH2BQ7Z745 1585 aa16.89■□□□□ 0.3
RTCB-204ENST00000485373 SMARCA2P51531 1590 aa16.86■□□□□ 0.29
RTCB-204ENST00000485373 ATAD2BQ9ULI0 1458 aa16.85■□□□□ 0.29
RTCB-204ENST00000485373 NCAPD3P42695 1498 aa16.8■□□□□ 0.28
RTCB-204ENST00000485373 PEG3Q9GZU2 1588 aa16.79■□□□□ 0.28
RTCB-204ENST00000485373 HMGXB3Q12766 1538 aa16.76■□□□□ 0.27
RTCB-204ENST00000485373 BAZ1BQ9UIG0 1483 aaKnown RBP16.76■□□□□ 0.27
RTCB-204ENST00000485373 WIZO95785 1651 aa16.75■□□□□ 0.27
RTCB-204ENST00000485373 RSF1Q96T23 1441 aaPredicted RBP16.73■□□□□ 0.27
RTCB-204ENST00000485373 TOP2AP11388 1531 aaKnown RBP16.57■□□□□ 0.24
RTCB-204ENST00000485373 SUPT5HO00267 1087 aaKnown RBP16.47■□□□□ 0.23
RTCB-204ENST00000485373 NESP48681 1621 aa16.4■□□□□ 0.22
RTCB-204ENST00000485373 LAMC3Q9Y6N6 1575 aa16.38■□□□□ 0.21
RTCB-204ENST00000485373 CCDC88BA6NC98 1476 aa16.35■□□□□ 0.21
RTCB-204ENST00000485373 ERCC6Q03468 1493 aa16.34■□□□□ 0.21
RTCB-204ENST00000485373 CADPSQ9ULU8 1353 aa16.33■□□□□ 0.2
RTCB-204ENST00000485373 PDS5BQ9NTI5 1447 aa16.27■□□□□ 0.19
RTCB-204ENST00000485373 CFTRP13569 1480 aa16.25■□□□□ 0.19
RTCB-204ENST00000485373 KIF21AQ7Z4S6 1674 aa16.24■□□□□ 0.19
RTCB-204ENST00000485373 PRDM2Q13029 1718 aa16.22■□□□□ 0.19
RTCB-204ENST00000485373 FANCD2Q9BXW9 1451 aa16.18■□□□□ 0.18
RTCB-204ENST00000485373 CEP164Q9UPV0 1460 aa16.16■□□□□ 0.18
RTCB-204ENST00000485373 THOC2Q8NI27 1593 aaKnown RBP16.13■□□□□ 0.17
RTCB-204ENST00000485373 MRC2Q9UBG0 1479 aa16.1■□□□□ 0.17
RTCB-204ENST00000485373 CUX2O14529 1486 aa16.07■□□□□ 0.16
RTCB-204ENST00000485373 WDR62O43379 1518 aa16.03■□□□□ 0.16
RTCB-204ENST00000485373 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
RTCB-204ENST00000485373 DNMBPQ6XZF7 1577 aa15.93■□□□□ 0.14
RTCB-204ENST00000485373 TOPBP1Q92547 1522 aa15.93■□□□□ 0.14
RTCB-204ENST00000485373 ABCC8Q09428 1581 aa15.92■□□□□ 0.14
RTCB-204ENST00000485373 CUX1P39880 1505 aa15.85■□□□□ 0.13
RTCB-204ENST00000485373 WRNQ14191 1432 aaPredicted RBP eCLIP15.81■□□□□ 0.12
RTCB-204ENST00000485373 IFT140Q96RY7 1462 aa15.8■□□□□ 0.12
RTCB-204ENST00000485373 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
RTCB-204ENST00000485373 FGD5Q6ZNL6 1462 aa15.79■□□□□ 0.12
RTCB-204ENST00000485373 SYNJ1O43426 1573 aa15.76■□□□□ 0.11
RTCB-204ENST00000485373 BIVM-ERCC5R4GMW8 1640 aa15.76■□□□□ 0.11
RTCB-204ENST00000485373 TOP2BQ02880 1626 aa15.75■□□□□ 0.11
RTCB-204ENST00000485373 SOGA1O94964 1423 aa15.74■□□□□ 0.11
RTCB-204ENST00000485373 RAD54L2Q9Y4B4 1467 aa15.73■□□□□ 0.11
RTCB-204ENST00000485373 TARBP1Q13395 1621 aaKnown RBP15.73■□□□□ 0.11
RTCB-204ENST00000485373 ZNF608Q9ULD9 1512 aaPredicted RBP15.71■□□□□ 0.11
RTCB-204ENST00000485373 EIF4G3O43432 1585 aaKnown RBP15.68■□□□□ 0.1
RTCB-204ENST00000485373 WDR97A6NE52 1622 aa15.65■□□□□ 0.1
RTCB-204ENST00000485373 AQRO60306 1485 aaKnown RBP eCLIP15.64■□□□□ 0.09
RTCB-204ENST00000485373 TDRD9Q8NDG6 1382 aaKnown RBP15.63■□□□□ 0.09
RTCB-204ENST00000485373 ABCA10Q8WWZ4 1543 aa15.63■□□□□ 0.09
RTCB-204ENST00000485373 GAPVD1Q14C86 1478 aa15.57■□□□□ 0.08
RTCB-204ENST00000485373 ABCA5Q8WWZ7 1642 aa15.57■□□□□ 0.08
RTCB-204ENST00000485373 PBRM1Q86U86 1689 aa15.57■□□□□ 0.08
RTCB-204ENST00000485373 GRIN2BQ13224 1484 aa15.54■□□□□ 0.08
RTCB-204ENST00000485373 TRIM41Q8WV44 630 aa15.53■□□□□ 0.08
RTCB-204ENST00000485373 SNAPC4Q5SXM2 1469 aa15.52■□□□□ 0.08
RTCB-204ENST00000485373 MAGI1Q96QZ7 1491 aaPredicted RBP15.49■□□□□ 0.07
RTCB-204ENST00000485373 CHD1O14646 1710 aa15.48■□□□□ 0.07
RTCB-204ENST00000485373 FBLN2P98095 1184 aa15.48■□□□□ 0.07
RTCB-204ENST00000485373 KIF27Q86VH2 1401 aa15.47■□□□□ 0.07
RTCB-204ENST00000485373 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
RTCB-204ENST00000485373 CHMP7Q8WUX9 453 aaPredicted RBP15.43■□□□□ 0.06
RTCB-204ENST00000485373 ADAMTS12P58397 1594 aa15.42■□□□□ 0.06
RTCB-204ENST00000485373 SYNJ2O15056 1496 aa15.42■□□□□ 0.06
RTCB-204ENST00000485373 OSCARQ8IYS5 282 aa15.42■□□□□ 0.06
RTCB-204ENST00000485373 CHIC1Q5VXU3 224 aa15.39■□□□□ 0.05
RTCB-204ENST00000485373 DNAJC5Q9H3Z4 198 aa15.39■□□□□ 0.05
RTCB-204ENST00000485373 FHAD1B1AJZ9 1412 aa15.38■□□□□ 0.05
RTCB-204ENST00000485373 CUL7Q14999 1698 aa15.36■□□□□ 0.05
RTCB-204ENST00000485373 IGF1RP08069 1367 aa15.35■□□□□ 0.05
RTCB-204ENST00000485373 GRIN2AQ12879 1464 aa15.34■□□□□ 0.05
RTCB-204ENST00000485373 RUSC2Q8N2Y8 1516 aa15.34■□□□□ 0.05
RTCB-204ENST00000485373 CARMIL1Q5VZK9 1371 aa15.29■□□□□ 0.04
RTCB-204ENST00000485373 CEP170Q5SW79 1584 aa15.27■□□□□ 0.03
RTCB-204ENST00000485373 CLASP1Q7Z460 1538 aa15.27■□□□□ 0.03
RTCB-204ENST00000485373 NUP160Q12769 1436 aa15.25■□□□□ 0.03
RTCB-204ENST00000485373 EEA1Q15075 1411 aa15.25■□□□□ 0.03
RTCB-204ENST00000485373 FAM9AQ8IZU1 332 aaPredicted RBP15.24■□□□□ 0.03
RTCB-204ENST00000485373 RAPGEF2Q9Y4G8 1499 aa15.22■□□□□ 0.03
RTCB-204ENST00000485373 CSRNP3Q8WYN3 585 aa15.2■□□□□ 0.02
RTCB-204ENST00000485373 ARHGEF11O15085 1522 aa15.19■□□□□ 0.02
RTCB-204ENST00000485373 RIMBP3CA6NJZ7 1639 aa15.19■□□□□ 0.02
RTCB-204ENST00000485373 RIMBP3BA6NNM3 1639 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 176.3 ms