RNA–Protein interactions for RNA: ENST00000485228.1

AVL9-207, Transcript of AVL9 cell migration associated, humanhuman

TSL 5

Gene AVL9, Length 489 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AVL9-207ENST00000485228 NISCHQ9Y2I1 1504 aa49.85■■■■■ 5.57
AVL9-207ENST00000485228 ABCC9O60706 1549 aa45.73■■■■■ 4.91
AVL9-207ENST00000485228 CCDC180Q9P1Z9 1646 aa45.16■■■■■ 4.82
AVL9-207ENST00000485228 DNAJC5BQ9UF47 199 aa43.5■■■■■ 4.55
AVL9-207ENST00000485228 RB1CC1Q8TDY2 1594 aa43.32■■■■■ 4.52
AVL9-207ENST00000485228 NACADO15069 1562 aa42.86■■■■■ 4.45
AVL9-207ENST00000485228 PABPN1Q86U42 306 aaKnown RBP eCLIP42.39■■■■■ 4.38
AVL9-207ENST00000485228 UNC13AQ9UPW8 1703 aa42.33■■■■■ 4.37
AVL9-207ENST00000485228 DCAF8L2P0C7V8 631 aa42.23■■■■■ 4.35
AVL9-207ENST00000485228 MYO15BQ96JP2 1530 aa42.05■■■■■ 4.32
AVL9-207ENST00000485228 BICRAQ9NZM4 1560 aa42.03■■■■■ 4.32
AVL9-207ENST00000485228 SHROOM4Q9ULL8 1493 aa41.54■■■■■ 4.24
AVL9-207ENST00000485228 CC2D2AQ9P2K1 1620 aa41.34■■■■■ 4.21
AVL9-207ENST00000485228 CECR2Q9BXF3 1484 aa41.34■■■■■ 4.21
AVL9-207ENST00000485228 DCAF1Q9Y4B6 1507 aa41.21■■■■■ 4.19
AVL9-207ENST00000485228 ZCCHC6Q5VYS8 1495 aaKnown RBP41.16■■■■■ 4.18
AVL9-207ENST00000485228 EIF4G1Q04637 1599 aaKnown RBP41.08■■■■■ 4.17
AVL9-207ENST00000485228 SCRIBQ14160 1630 aa40.97■■■■■ 4.15
AVL9-207ENST00000485228 DNAJC5Q9H3Z4 198 aa40.61■■■■■ 4.09
AVL9-207ENST00000485228 CUX2O14529 1486 aa39.87■■■■□ 3.97
AVL9-207ENST00000485228 ERCC6Q03468 1493 aa39.61■■■■□ 3.93
AVL9-207ENST00000485228 NCAPD3P42695 1498 aa39.53■■■■□ 3.92
AVL9-207ENST00000485228 ATAD2BQ9ULI0 1458 aa39.27■■■■□ 3.88
AVL9-207ENST00000485228 HMGXB3Q12766 1538 aa39.21■■■■□ 3.87
AVL9-207ENST00000485228 SMARCA2P51531 1590 aa39.19■■■■□ 3.86
AVL9-207ENST00000485228 SMARCA4P51532 1647 aa39.07■■■■□ 3.84
AVL9-207ENST00000485228 NESP48681 1621 aa39.06■■■■□ 3.84
AVL9-207ENST00000485228 THOC2Q8NI27 1593 aaKnown RBP38.92■■■■□ 3.82
AVL9-207ENST00000485228 BAZ1BQ9UIG0 1483 aaKnown RBP38.86■■■■□ 3.81
AVL9-207ENST00000485228 LAMC3Q9Y6N6 1575 aa38.8■■■■□ 3.8
AVL9-207ENST00000485228 BAZ1AQ9NRL2 1556 aaPredicted RBP38.78■■■■□ 3.8
AVL9-207ENST00000485228 PEG3Q9GZU2 1588 aa38.74■■■■□ 3.79
AVL9-207ENST00000485228 KIF21AQ7Z4S6 1674 aa38.62■■■■□ 3.77
AVL9-207ENST00000485228 PDS5BQ9NTI5 1447 aa38.57■■■■□ 3.77
AVL9-207ENST00000485228 TRIM41Q8WV44 630 aa38.44■■■■□ 3.74
AVL9-207ENST00000485228 MROH2BQ7Z745 1585 aa38.35■■■■□ 3.73
AVL9-207ENST00000485228 MRC2Q9UBG0 1479 aa38.28■■■■□ 3.72
AVL9-207ENST00000485228 CADPSQ9ULU8 1353 aa38.26■■■■□ 3.72
AVL9-207ENST00000485228 WDR62O43379 1518 aa38.23■■■■□ 3.71
AVL9-207ENST00000485228 CEP164Q9UPV0 1460 aa37.97■■■■□ 3.67
AVL9-207ENST00000485228 WIZO95785 1651 aa37.86■■■■□ 3.65
AVL9-207ENST00000485228 FANCD2Q9BXW9 1451 aa37.84■■■■□ 3.65
AVL9-207ENST00000485228 OSCARQ8IYS5 282 aa37.82■■■■□ 3.64
AVL9-207ENST00000485228 CFTRP13569 1480 aa37.69■■■■□ 3.62
AVL9-207ENST00000485228 URB2Q14146 1524 aaKnown RBP37.55■■■■□ 3.6
AVL9-207ENST00000485228 RIMBP3CA6NJZ7 1639 aa37.45■■■■□ 3.59
AVL9-207ENST00000485228 RIMBP3BA6NNM3 1639 aa37.45■■■■□ 3.59
AVL9-207ENST00000485228 RIMBP3Q9UFD9 1639 aa37.45■■■■□ 3.59
AVL9-207ENST00000485228 TOP2AP11388 1531 aaKnown RBP37.39■■■■□ 3.58
AVL9-207ENST00000485228 PRDM2Q13029 1718 aa37.35■■■■□ 3.57
AVL9-207ENST00000485228 RSF1Q96T23 1441 aaPredicted RBP37.27■■■■□ 3.56
AVL9-207ENST00000485228 ARHGEF11O15085 1522 aa37.26■■■■□ 3.55
AVL9-207ENST00000485228 IFT140Q96RY7 1462 aa37.25■■■■□ 3.55
AVL9-207ENST00000485228 ZNF608Q9ULD9 1512 aaPredicted RBP37.18■■■■□ 3.54
AVL9-207ENST00000485228 TOPBP1Q92547 1522 aa37.03■■■■□ 3.52
AVL9-207ENST00000485228 EIF4G3O43432 1585 aaKnown RBP37.01■■■■□ 3.52
AVL9-207ENST00000485228 ABCC8Q09428 1581 aa36.98■■■■□ 3.51
AVL9-207ENST00000485228 CYB5RLQ6IPT4 315 aa36.94■■■■□ 3.5
AVL9-207ENST00000485228 CCDC88BA6NC98 1476 aa36.9■■■■□ 3.5
AVL9-207ENST00000485228 CHD1O14646 1710 aa36.89■■■■□ 3.5
AVL9-207ENST00000485228 DNMBPQ6XZF7 1577 aa36.87■■■■□ 3.49
AVL9-207ENST00000485228 ARAP1Q96P48 1450 aa36.82■■■■□ 3.48
AVL9-207ENST00000485228 TARBP1Q13395 1621 aaKnown RBP36.77■■■■□ 3.48
AVL9-207ENST00000485228 TRHP20396 242 aaPredicted RBP36.77■■■■□ 3.48
AVL9-207ENST00000485228 AQRO60306 1485 aaKnown RBP eCLIP36.74■■■■□ 3.474e-6■■■■■ 31
AVL9-207ENST00000485228 FBLN2P98095 1184 aa36.61■■■■□ 3.45
AVL9-207ENST00000485228 POLA1P09884 1462 aaPredicted RBP36.6■■■■□ 3.45
AVL9-207ENST00000485228 WDR97A6NE52 1622 aa36.47■■■■□ 3.43
AVL9-207ENST00000485228 CLASP1Q7Z460 1538 aa36.45■■■■□ 3.43
AVL9-207ENST00000485228 RAD54L2Q9Y4B4 1467 aa36.42■■■■□ 3.42
AVL9-207ENST00000485228 SNAPC4Q5SXM2 1469 aa36.39■■■■□ 3.42
AVL9-207ENST00000485228 SOGA1O94964 1423 aa36.39■■■■□ 3.42
AVL9-207ENST00000485228 SYNJ1O43426 1573 aa36.39■■■■□ 3.42
AVL9-207ENST00000485228 TDRD9Q8NDG6 1382 aaKnown RBP36.38■■■■□ 3.41
AVL9-207ENST00000485228 MAGI1Q96QZ7 1491 aaPredicted RBP36.32■■■■□ 3.41
AVL9-207ENST00000485228 AEBP2Q6ZN18 517 aaPredicted RBP36.31■■■■□ 3.4
AVL9-207ENST00000485228 CHMP7Q8WUX9 453 aaPredicted RBP36.27■■■■□ 3.4
AVL9-207ENST00000485228 FGD5Q6ZNL6 1462 aa36.25■■■■□ 3.39
AVL9-207ENST00000485228 GRIN2BQ13224 1484 aa36.21■■■■□ 3.39
AVL9-207ENST00000485228 SYNJ2O15056 1496 aa36.19■■■■□ 3.38
AVL9-207ENST00000485228 CUX1P39880 1505 aa36.1■■■■□ 3.37
AVL9-207ENST00000485228 GAPVD1Q14C86 1478 aa36.09■■■■□ 3.37
AVL9-207ENST00000485228 PBRM1Q86U86 1689 aa36.05■■■■□ 3.36
AVL9-207ENST00000485228 ABCA5Q8WWZ7 1642 aa35.86■■■■□ 3.33
AVL9-207ENST00000485228 ABCA10Q8WWZ4 1543 aa35.83■■■■□ 3.33
AVL9-207ENST00000485228 GRIN2AQ12879 1464 aa35.74■■■■□ 3.31
AVL9-207ENST00000485228 ERCC6L2Q5T890 1561 aa35.73■■■■□ 3.31
AVL9-207ENST00000485228 CEP170Q5SW79 1584 aa35.68■■■■□ 3.3
AVL9-207ENST00000485228 NUP160Q12769 1436 aa35.66■■■■□ 3.3
AVL9-207ENST00000485228 ADAMTS12P58397 1594 aa35.65■■■■□ 3.3
AVL9-207ENST00000485228 SHROOM2Q13796 1616 aa35.62■■■■□ 3.29
AVL9-207ENST00000485228 KIF13AQ9H1H9 1805 aa35.57■■■■□ 3.28
AVL9-207ENST00000485228 WRNQ14191 1432 aaPredicted RBP eCLIP35.52■■■■□ 3.28
AVL9-207ENST00000485228 FHAD1B1AJZ9 1412 aa35.49■■■■□ 3.27
AVL9-207ENST00000485228 ERICH3Q5RHP9 1530 aa35.4■■■■□ 3.26
AVL9-207ENST00000485228 BIVM-ERCC5R4GMW8 1640 aa35.38■■■■□ 3.25
AVL9-207ENST00000485228 TOP2BQ02880 1626 aa35.35■■■■□ 3.25
AVL9-207ENST00000485228 PRG4Q92954 1404 aaPredicted RBP35.33■■■■□ 3.25
AVL9-207ENST00000485228 ABCC10Q5T3U5 1492 aa35.27■■■■□ 3.24
AVL9-207ENST00000485228 MAPKBP1O60336 1514 aa35.23■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 402.5 ms