RNA–Protein interactions for RNA: ENST00000485149.1

SORT1-206, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 442 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-206ENST00000485149 AEBP2Q6ZN18 517 aaPredicted RBP19.46■□□□□ 0.71
SORT1-206ENST00000485149 CHIC1Q5VXU3 224 aa18.96■□□□□ 0.63
SORT1-206ENST00000485149 SENP3Q9H4L4 574 aaPredicted RBP16.67■□□□□ 0.26
SORT1-206ENST00000485149 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.24
SORT1-206ENST00000485149 NISCHQ9Y2I1 1504 aa15.63■□□□□ 0.09
SORT1-206ENST00000485149 FOXD1Q16676 465 aa15.39■□□□□ 0.05
SORT1-206ENST00000485149 PLPPR3Q6T4P5 718 aa15.35■□□□□ 0.05
SORT1-206ENST00000485149 ABCC9O60706 1549 aa14.68□□□□□ -0.06
SORT1-206ENST00000485149 PPP6R1Q9UPN7 881 aa14.64□□□□□ -0.07
SORT1-206ENST00000485149 ADRA2BP18089 450 aa14.61□□□□□ -0.07
SORT1-206ENST00000485149 PIAS4Q8N2W9 510 aaPredicted RBP14.49□□□□□ -0.09
SORT1-206ENST00000485149 MSH5O43196 834 aa14.37□□□□□ -0.11
SORT1-206ENST00000485149 CCDC180Q9P1Z9 1646 aa14.26□□□□□ -0.13
SORT1-206ENST00000485149 DNAJC5BQ9UF47 199 aa14.16□□□□□ -0.14
SORT1-206ENST00000485149 DNAJC5Q9H3Z4 198 aa14.02□□□□□ -0.17
SORT1-206ENST00000485149 RB1CC1Q8TDY2 1594 aa13.8□□□□□ -0.2
SORT1-206ENST00000485149 NACADO15069 1562 aa13.59□□□□□ -0.23
SORT1-206ENST00000485149 PABPN1Q86U42 306 aaKnown RBP eCLIP13.56□□□□□ -0.24
SORT1-206ENST00000485149 SCAF1Q9H7N4 1312 aaKnown RBP13.54□□□□□ -0.24
SORT1-206ENST00000485149 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
SORT1-206ENST00000485149 UNC13AQ9UPW8 1703 aa13.44□□□□□ -0.26
SORT1-206ENST00000485149 BICRAQ9NZM4 1560 aa13.39□□□□□ -0.27
SORT1-206ENST00000485149 DCAF8L2P0C7V8 631 aa13.35□□□□□ -0.27
SORT1-206ENST00000485149 CECR2Q9BXF3 1484 aa13.29□□□□□ -0.28
SORT1-206ENST00000485149 MAPK8IP2Q13387 824 aaPredicted RBP13.27□□□□□ -0.29
SORT1-206ENST00000485149 MYO15BQ96JP2 1530 aa13.26□□□□□ -0.29
SORT1-206ENST00000485149 DMRT2Q9Y5R5 561 aa13.26□□□□□ -0.29
SORT1-206ENST00000485149 CC2D2AQ9P2K1 1620 aa13.25□□□□□ -0.29
SORT1-206ENST00000485149 POTEDQ86YR6 584 aa13.25□□□□□ -0.29
SORT1-206ENST00000485149 SHROOM4Q9ULL8 1493 aa13.23□□□□□ -0.29
SORT1-206ENST00000485149 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
SORT1-206ENST00000485149 NCBP3Q53F19 620 aaKnown RBP13.13□□□□□ -0.31
SORT1-206ENST00000485149 EIF4G1Q04637 1599 aaKnown RBP13.11□□□□□ -0.31
SORT1-206ENST00000485149 RNF216Q9NWF9 866 aaPredicted RBP12.96□□□□□ -0.33
SORT1-206ENST00000485149 HOXD11P31277 338 aaPredicted RBP12.95□□□□□ -0.34
SORT1-206ENST00000485149 SCRIBQ14160 1630 aa12.91□□□□□ -0.34
SORT1-206ENST00000485149 KCNA4P22459 653 aa12.91□□□□□ -0.34
SORT1-206ENST00000485149 DCAF1Q9Y4B6 1507 aa12.91□□□□□ -0.34
SORT1-206ENST00000485149 CUX2O14529 1486 aa12.89□□□□□ -0.35
SORT1-206ENST00000485149 TRIM41Q8WV44 630 aa12.86□□□□□ -0.35
SORT1-206ENST00000485149 ZCCHC6Q5VYS8 1495 aaKnown RBP12.85□□□□□ -0.35
SORT1-206ENST00000485149 NPM3O75607 178 aaKnown RBP12.85□□□□□ -0.35
SORT1-206ENST00000485149 SLC24A1O60721 1099 aa12.82□□□□□ -0.36
SORT1-206ENST00000485149 ERCC6Q03468 1493 aa12.72□□□□□ -0.37
SORT1-206ENST00000485149 DCAF8L1A6NGE4 600 aa12.56□□□□□ -0.4
SORT1-206ENST00000485149 NCAPD3P42695 1498 aa12.54□□□□□ -0.4
SORT1-206ENST00000485149 EHMT2Q96KQ7 1210 aa12.51□□□□□ -0.41
SORT1-206ENST00000485149 THOC2Q8NI27 1593 aaKnown RBP12.47□□□□□ -0.41
SORT1-206ENST00000485149 NESP48681 1621 aa12.46□□□□□ -0.41
SORT1-206ENST00000485149 ATAD2BQ9ULI0 1458 aa12.43□□□□□ -0.42
SORT1-206ENST00000485149 HMGXB3Q12766 1538 aa12.42□□□□□ -0.42
SORT1-206ENST00000485149 SMARCA2P51531 1590 aa12.38□□□□□ -0.43
SORT1-206ENST00000485149 LAMC3Q9Y6N6 1575 aa12.35□□□□□ -0.43
SORT1-206ENST00000485149 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
SORT1-206ENST00000485149 KIF21AQ7Z4S6 1674 aa12.3□□□□□ -0.44
SORT1-206ENST00000485149 ILDR1Q86SU0 546 aaPredicted RBP12.3□□□□□ -0.44
SORT1-206ENST00000485149 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
SORT1-206ENST00000485149 PDS5BQ9NTI5 1447 aa12.28□□□□□ -0.44
SORT1-206ENST00000485149 BAZ1BQ9UIG0 1483 aaKnown RBP12.28□□□□□ -0.44
SORT1-206ENST00000485149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.27□□□□□ -0.45
SORT1-206ENST00000485149 RNF39Q9H2S5 420 aa12.25□□□□□ -0.45
SORT1-206ENST00000485149 BAZ1AQ9NRL2 1556 aaPredicted RBP12.25□□□□□ -0.45
SORT1-206ENST00000485149 PEG3Q9GZU2 1588 aa12.2□□□□□ -0.46
SORT1-206ENST00000485149 WDR62O43379 1518 aa12.2□□□□□ -0.46
SORT1-206ENST00000485149 MRC2Q9UBG0 1479 aa12.2□□□□□ -0.46
SORT1-206ENST00000485149 OSCARQ8IYS5 282 aa12.19□□□□□ -0.46
SORT1-206ENST00000485149 SLC4A2P04920 1241 aa12.16□□□□□ -0.46
SORT1-206ENST00000485149 C1QBPQ07021 282 aaKnown RBP12.15□□□□□ -0.46
SORT1-206ENST00000485149 CADPSQ9ULU8 1353 aa12.13□□□□□ -0.47
SORT1-206ENST00000485149 RIMBP3CA6NJZ7 1639 aa12.09□□□□□ -0.47
SORT1-206ENST00000485149 RIMBP3BA6NNM3 1639 aa12.09□□□□□ -0.47
SORT1-206ENST00000485149 RIMBP3Q9UFD9 1639 aa12.09□□□□□ -0.47
SORT1-206ENST00000485149 U3KPZ7 1027 aaPredicted RBP12.06□□□□□ -0.48
SORT1-206ENST00000485149 CEP164Q9UPV0 1460 aa12.06□□□□□ -0.48
SORT1-206ENST00000485149 ARHGEF11O15085 1522 aa12.01□□□□□ -0.49
SORT1-206ENST00000485149 MROH2BQ7Z745 1585 aa12.01□□□□□ -0.49
SORT1-206ENST00000485149 FOXD4L1Q9NU39 408 aa12.01□□□□□ -0.49
SORT1-206ENST00000485149 CACNB1Q02641 598 aaPredicted RBP11.99□□□□□ -0.49
SORT1-206ENST00000485149 FANCD2Q9BXW9 1451 aa11.99□□□□□ -0.49
SORT1-206ENST00000485149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.98□□□□□ -0.49
SORT1-206ENST00000485149 HNRNPUL2Q1KMD3 747 aaKnown RBP11.98□□□□□ -0.49
SORT1-206ENST00000485149 TRHP20396 242 aaPredicted RBP11.95□□□□□ -0.5
SORT1-206ENST00000485149 MYCNP04198 464 aaPredicted RBP11.94□□□□□ -0.5
SORT1-206ENST00000485149 CYB5RLQ6IPT4 315 aa11.92□□□□□ -0.5
SORT1-206ENST00000485149 APLP2Q06481 763 aa11.91□□□□□ -0.5
SORT1-206ENST00000485149 URB2Q14146 1524 aaKnown RBP11.91□□□□□ -0.5
SORT1-206ENST00000485149 SAMD1Q6SPF0 538 aaPredicted RBP11.9□□□□□ -0.5
SORT1-206ENST00000485149 CFTRP13569 1480 aa11.89□□□□□ -0.51
SORT1-206ENST00000485149 ZBTB22O15209 634 aa11.85□□□□□ -0.51
SORT1-206ENST00000485149 WIZO95785 1651 aa11.84□□□□□ -0.51
SORT1-206ENST00000485149 ARAP1Q96P48 1450 aa11.84□□□□□ -0.51
SORT1-206ENST00000485149 IFT140Q96RY7 1462 aa11.84□□□□□ -0.51
SORT1-206ENST00000485149 ZNF608Q9ULD9 1512 aaPredicted RBP11.84□□□□□ -0.51
SORT1-206ENST00000485149 RTN4Q9NQC3 1192 aaKnown RBP11.82□□□□□ -0.52
SORT1-206ENST00000485149 RSF1Q96T23 1441 aaPredicted RBP11.8□□□□□ -0.52
SORT1-206ENST00000485149 EIF4G3O43432 1585 aaKnown RBP11.78□□□□□ -0.52
SORT1-206ENST00000485149 CSRNP3Q8WYN3 585 aa11.76□□□□□ -0.53
SORT1-206ENST00000485149 CHD1O14646 1710 aa11.76□□□□□ -0.53
SORT1-206ENST00000485149 PRDM2Q13029 1718 aa11.74□□□□□ -0.53
SORT1-206ENST00000485149 TOPBP1Q92547 1522 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 213.9 ms