RNA–Protein interactions for RNA: ENST00000484808.1

LSS-209, Transcript of lanosterol synthase, humanhuman

TSL 5

Gene LSS, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-209ENST00000484808 NISCHQ9Y2I1 1504 aa41.54■■■■■ 4.24
LSS-209ENST00000484808 CCDC180Q9P1Z9 1646 aa37.1■■■■□ 3.53
LSS-209ENST00000484808 ABCC9O60706 1549 aa36.69■■■■□ 3.46
LSS-209ENST00000484808 RB1CC1Q8TDY2 1594 aa35.02■■■■□ 3.2
LSS-209ENST00000484808 NACADO15069 1562 aa34.87■■■■□ 3.17
LSS-209ENST00000484808 DCAF8L2P0C7V8 631 aa34.78■■■■□ 3.16
LSS-209ENST00000484808 UNC13AQ9UPW8 1703 aa34.61■■■■□ 3.13
LSS-209ENST00000484808 ZCCHC6Q5VYS8 1495 aaKnown RBP34.54■■■■□ 3.12
LSS-209ENST00000484808 MYO15BQ96JP2 1530 aa34.46■■■■□ 3.11
LSS-209ENST00000484808 DCAF1Q9Y4B6 1507 aa34.25■■■■□ 3.07
LSS-209ENST00000484808 PABPN1Q86U42 306 aaKnown RBP eCLIP34.2■■■■□ 3.07
LSS-209ENST00000484808 BICRAQ9NZM4 1560 aa34.18■■■■□ 3.06
LSS-209ENST00000484808 DNAJC5BQ9UF47 199 aa34.08■■■■□ 3.05
LSS-209ENST00000484808 SCRIBQ14160 1630 aa33.93■■■■□ 3.02
LSS-209ENST00000484808 SHROOM4Q9ULL8 1493 aa33.42■■■□□ 2.94
LSS-209ENST00000484808 CC2D2AQ9P2K1 1620 aa33.2■■■□□ 2.9
LSS-209ENST00000484808 EIF4G1Q04637 1599 aaKnown RBP33.19■■■□□ 2.9
LSS-209ENST00000484808 CECR2Q9BXF3 1484 aa32.91■■■□□ 2.86
LSS-209ENST00000484808 SMARCA4P51532 1647 aa32.37■■■□□ 2.77
LSS-209ENST00000484808 ATAD2BQ9ULI0 1458 aa32.21■■■□□ 2.75
LSS-209ENST00000484808 NCAPD3P42695 1498 aa32.17■■■□□ 2.74
LSS-209ENST00000484808 BAZ1AQ9NRL2 1556 aaPredicted RBP32.15■■■□□ 2.74
LSS-209ENST00000484808 MROH2BQ7Z745 1585 aa32.11■■■□□ 2.73
LSS-209ENST00000484808 SMARCA2P51531 1590 aa32.08■■■□□ 2.73
LSS-209ENST00000484808 HMGXB3Q12766 1538 aa32.02■■■□□ 2.72
LSS-209ENST00000484808 PEG3Q9GZU2 1588 aa31.98■■■□□ 2.71
LSS-209ENST00000484808 BAZ1BQ9UIG0 1483 aaKnown RBP31.88■■■□□ 2.69
LSS-209ENST00000484808 WIZO95785 1651 aa31.83■■■□□ 2.69
LSS-209ENST00000484808 NESP48681 1621 aa31.73■■■□□ 2.67
LSS-209ENST00000484808 RSF1Q96T23 1441 aaPredicted RBP31.52■■■□□ 2.64
LSS-209ENST00000484808 ERCC6Q03468 1493 aa31.5■■■□□ 2.63
LSS-209ENST00000484808 KIF21AQ7Z4S6 1674 aa31.41■■■□□ 2.62
LSS-209ENST00000484808 LAMC3Q9Y6N6 1575 aa31.41■■■□□ 2.62
LSS-209ENST00000484808 THOC2Q8NI27 1593 aaKnown RBP31.3■■■□□ 2.6
LSS-209ENST00000484808 TOP2AP11388 1531 aaKnown RBP31.29■■■□□ 2.6
LSS-209ENST00000484808 CUX2O14529 1486 aa31.27■■■□□ 2.6
LSS-209ENST00000484808 CADPSQ9ULU8 1353 aa31.19■■■□□ 2.58
LSS-209ENST00000484808 PDS5BQ9NTI5 1447 aa31.09■■■□□ 2.57
LSS-209ENST00000484808 CFTRP13569 1480 aa30.99■■■□□ 2.55
LSS-209ENST00000484808 PRDM2Q13029 1718 aa30.95■■■□□ 2.55
LSS-209ENST00000484808 CCDC88BA6NC98 1476 aa30.95■■■□□ 2.55
LSS-209ENST00000484808 FANCD2Q9BXW9 1451 aa30.91■■■□□ 2.54
LSS-209ENST00000484808 MRC2Q9UBG0 1479 aa30.91■■■□□ 2.54
LSS-209ENST00000484808 CEP164Q9UPV0 1460 aa30.88■■■□□ 2.53
LSS-209ENST00000484808 WDR62O43379 1518 aa30.88■■■□□ 2.53
LSS-209ENST00000484808 DNAJC5Q9H3Z4 198 aa30.74■■■□□ 2.51
LSS-209ENST00000484808 URB2Q14146 1524 aaKnown RBP30.72■■■□□ 2.51
LSS-209ENST00000484808 SUPT5HO00267 1087 aaKnown RBP30.45■■■□□ 2.47
LSS-209ENST00000484808 TOPBP1Q92547 1522 aa30.42■■■□□ 2.46
LSS-209ENST00000484808 DNMBPQ6XZF7 1577 aa30.33■■■□□ 2.45
LSS-209ENST00000484808 ZNF608Q9ULD9 1512 aaPredicted RBP30.28■■■□□ 2.44
LSS-209ENST00000484808 TARBP1Q13395 1621 aaKnown RBP30.2■■■□□ 2.43
LSS-209ENST00000484808 IFT140Q96RY7 1462 aa30.19■■■□□ 2.42
LSS-209ENST00000484808 ABCC8Q09428 1581 aa30.19■■■□□ 2.42
LSS-209ENST00000484808 EIF4G3O43432 1585 aaKnown RBP30.15■■■□□ 2.42
LSS-209ENST00000484808 POLA1P09884 1462 aaPredicted RBP30.13■■■□□ 2.41
LSS-209ENST00000484808 CUX1P39880 1505 aa30.13■■■□□ 2.41
LSS-209ENST00000484808 RAD54L2Q9Y4B4 1467 aa30.07■■■□□ 2.4
LSS-209ENST00000484808 FGD5Q6ZNL6 1462 aa30.02■■■□□ 2.4
LSS-209ENST00000484808 AQRO60306 1485 aaKnown RBP eCLIP30.01■■■□□ 2.45e-6■■■□□ 16.9
LSS-209ENST00000484808 CHD1O14646 1710 aa29.94■■■□□ 2.38
LSS-209ENST00000484808 WDR97A6NE52 1622 aa29.94■■■□□ 2.38
LSS-209ENST00000484808 SOGA1O94964 1423 aa29.93■■■□□ 2.38
LSS-209ENST00000484808 TDRD9Q8NDG6 1382 aaKnown RBP29.87■■■□□ 2.37
LSS-209ENST00000484808 OSCARQ8IYS5 282 aa29.85■■■□□ 2.37
LSS-209ENST00000484808 SYNJ1O43426 1573 aa29.8■■■□□ 2.36
LSS-209ENST00000484808 BIVM-ERCC5R4GMW8 1640 aa29.78■■■□□ 2.36
LSS-209ENST00000484808 PBRM1Q86U86 1689 aa29.76■■■□□ 2.36
LSS-209ENST00000484808 TOP2BQ02880 1626 aa29.72■■■□□ 2.35
LSS-209ENST00000484808 SNAPC4Q5SXM2 1469 aa29.71■■■□□ 2.35
LSS-209ENST00000484808 RIMBP3CA6NJZ7 1639 aa29.69■■■□□ 2.34
LSS-209ENST00000484808 RIMBP3BA6NNM3 1639 aa29.69■■■□□ 2.34
LSS-209ENST00000484808 RIMBP3Q9UFD9 1639 aa29.69■■■□□ 2.34
LSS-209ENST00000484808 ABCA5Q8WWZ7 1642 aa29.68■■■□□ 2.34
LSS-209ENST00000484808 WRNQ14191 1432 aaPredicted RBP eCLIP29.66■■■□□ 2.34
LSS-209ENST00000484808 ABCA10Q8WWZ4 1543 aa29.66■■■□□ 2.34
LSS-209ENST00000484808 TRIM41Q8WV44 630 aa29.65■■■□□ 2.34
LSS-209ENST00000484808 FBLN2P98095 1184 aa29.6■■■□□ 2.33
LSS-209ENST00000484808 GRIN2BQ13224 1484 aa29.6■■■□□ 2.33
LSS-209ENST00000484808 GAPVD1Q14C86 1478 aa29.6■■■□□ 2.33
LSS-209ENST00000484808 ARHGEF11O15085 1522 aa29.55■■■□□ 2.32
LSS-209ENST00000484808 MAGI1Q96QZ7 1491 aaPredicted RBP29.55■■■□□ 2.32
LSS-209ENST00000484808 CLASP1Q7Z460 1538 aa29.47■■■□□ 2.31
LSS-209ENST00000484808 SYNJ2O15056 1496 aa29.46■■■□□ 2.31
LSS-209ENST00000484808 ADAMTS12P58397 1594 aa29.41■■■□□ 2.3
LSS-209ENST00000484808 CHMP7Q8WUX9 453 aaPredicted RBP29.4■■■□□ 2.3
LSS-209ENST00000484808 ARAP1Q96P48 1450 aa29.34■■■□□ 2.29
LSS-209ENST00000484808 GRIN2AQ12879 1464 aa29.28■■■□□ 2.28
LSS-209ENST00000484808 CEP170Q5SW79 1584 aa29.27■■■□□ 2.28
LSS-209ENST00000484808 ERICH3Q5RHP9 1530 aa29.26■■■□□ 2.27
LSS-209ENST00000484808 CYB5RLQ6IPT4 315 aa29.22■■■□□ 2.27
LSS-209ENST00000484808 FHAD1B1AJZ9 1412 aa29.19■■■□□ 2.26
LSS-209ENST00000484808 ERCC6L2Q5T890 1561 aa29.18■■■□□ 2.26
LSS-209ENST00000484808 NUP160Q12769 1436 aa29.15■■■□□ 2.26
LSS-209ENST00000484808 SHROOM2Q13796 1616 aa29.08■■■□□ 2.25
LSS-209ENST00000484808 IGF1RP08069 1367 aa29.01■■■□□ 2.24
LSS-209ENST00000484808 KIF27Q86VH2 1401 aa29■■■□□ 2.23
LSS-209ENST00000484808 RUSC2Q8N2Y8 1516 aa28.99■■■□□ 2.23
LSS-209ENST00000484808 CUL7Q14999 1698 aa28.98■■■□□ 2.23
LSS-209ENST00000484808 PRG4Q92954 1404 aaPredicted RBP28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms