RNA–Protein interactions for RNA: ENST00000484806.1

SFI1-223, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 567 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-223	ENST00000484806	NISCH	Q9Y2I1	1504 aa		18.67	■□□□□ 0.58
SFI1-223	ENST00000484806	CCDC180	Q9P1Z9	1646 aa		16.5	■□□□□ 0.23
SFI1-223	ENST00000484806	ZCCHC6	Q5VYS8	1495 aa	Known RBP	15.65	■□□□□ 0.1
SFI1-223	ENST00000484806	ABCC9	O60706	1549 aa		15.64	■□□□□ 0.09
SFI1-223	ENST00000484806	DCAF1	Q9Y4B6	1507 aa		15.51	■□□□□ 0.07
SFI1-223	ENST00000484806	MYO15B	Q96JP2	1530 aa		15.44	■□□□□ 0.06
SFI1-223	ENST00000484806	DCAF8L2	P0C7V8	631 aa		15.4	■□□□□ 0.06
SFI1-223	ENST00000484806	NACAD	O15069	1562 aa		15.39	■□□□□ 0.05
SFI1-223	ENST00000484806	RB1CC1	Q8TDY2	1594 aa		15.32	■□□□□ 0.04
SFI1-223	ENST00000484806	SCRIB	Q14160	1630 aa		15.03	■□□□□ -0
SFI1-223	ENST00000484806	SHROOM4	Q9ULL8	1493 aa		14.95	□□□□□ -0.02
SFI1-223	ENST00000484806	UNC13A	Q9UPW8	1703 aa		14.93	□□□□□ -0.02
SFI1-223	ENST00000484806	BICRA	Q9NZM4	1560 aa		14.74	□□□□□ -0.05
SFI1-223	ENST00000484806	PABPN1	Q86U42	306 aa	Known RBP eCLIP	14.64	□□□□□ -0.07
SFI1-223	ENST00000484806	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	14.49	□□□□□ -0.09
SFI1-223	ENST00000484806	CECR2	Q9BXF3	1484 aa		14.44	□□□□□ -0.1
SFI1-223	ENST00000484806	SMARCA4	P51532	1647 aa		14.42	□□□□□ -0.1
SFI1-223	ENST00000484806	EIF4G1	Q04637	1599 aa	Known RBP	14.37	□□□□□ -0.11
SFI1-223	ENST00000484806	MROH2B	Q7Z745	1585 aa		14.36	□□□□□ -0.11
SFI1-223	ENST00000484806	RSF1	Q96T23	1441 aa	Predicted RBP	14.35	□□□□□ -0.11
SFI1-223	ENST00000484806	SUPT5H	O00267	1087 aa	Known RBP	14.29	□□□□□ -0.12
SFI1-223	ENST00000484806	SMARCA2	P51531	1590 aa		14.28	□□□□□ -0.12
SFI1-223	ENST00000484806	PEG3	Q9GZU2	1588 aa		14.28	□□□□□ -0.12
SFI1-223	ENST00000484806	WIZ	O95785	1651 aa		14.25	□□□□□ -0.13
SFI1-223	ENST00000484806	ATAD2B	Q9ULI0	1458 aa		14.21	□□□□□ -0.13
SFI1-223	ENST00000484806	CC2D2A	Q9P2K1	1620 aa		14.19	□□□□□ -0.14
SFI1-223	ENST00000484806	TOP2A	P11388	1531 aa	Known RBP	14.17	□□□□□ -0.14
SFI1-223	ENST00000484806	HMGXB3	Q12766	1538 aa		14.17	□□□□□ -0.14
SFI1-223	ENST00000484806	BAZ1B	Q9UIG0	1483 aa	Known RBP	14.16	□□□□□ -0.14
SFI1-223	ENST00000484806	NCAPD3	P42695	1498 aa		14.13	□□□□□ -0.15
SFI1-223	ENST00000484806	AEBP2	Q6ZN18	517 aa	Predicted RBP	14.12	□□□□□ -0.15
SFI1-223	ENST00000484806	CCDC88B	A6NC98	1476 aa		13.94	□□□□□ -0.18
SFI1-223	ENST00000484806	DNAJC5B	Q9UF47	199 aa		13.86	□□□□□ -0.19
SFI1-223	ENST00000484806	PRDM2	Q13029	1718 aa		13.79	□□□□□ -0.2
SFI1-223	ENST00000484806	LAMC3	Q9Y6N6	1575 aa		13.76	□□□□□ -0.21
SFI1-223	ENST00000484806	CFTR	P13569	1480 aa		13.76	□□□□□ -0.21
SFI1-223	ENST00000484806	CADPS	Q9ULU8	1353 aa		13.76	□□□□□ -0.21
SFI1-223	ENST00000484806	PDS5B	Q9NTI5	1447 aa		13.65	□□□□□ -0.22
SFI1-223	ENST00000484806	NES	P48681	1621 aa		13.63	□□□□□ -0.23
SFI1-223	ENST00000484806	FANCD2	Q9BXW9	1451 aa		13.61	□□□□□ -0.23
SFI1-223	ENST00000484806	CEP164	Q9UPV0	1460 aa		13.59	□□□□□ -0.23
SFI1-223	ENST00000484806	CHIC1	Q5VXU3	224 aa		13.57	□□□□□ -0.24
SFI1-223	ENST00000484806	WRN	Q14191	1432 aa	Predicted RBP eCLIP	13.56	□□□□□ -0.24
SFI1-223	ENST00000484806	ABCC8	Q09428	1581 aa		13.56	□□□□□ -0.24
SFI1-223	ENST00000484806	KIF21A	Q7Z4S6	1674 aa		13.56	□□□□□ -0.24
SFI1-223	ENST00000484806	ERCC6	Q03468	1493 aa		13.53	□□□□□ -0.24
SFI1-223	ENST00000484806	TRIM41	Q8WV44	630 aa		13.52	□□□□□ -0.25
SFI1-223	ENST00000484806	BIVM-ERCC5	R4GMW8	1640 aa		13.51	□□□□□ -0.25
SFI1-223	ENST00000484806	TOP2B	Q02880	1626 aa		13.5	□□□□□ -0.25
SFI1-223	ENST00000484806	DNMBP	Q6XZF7	1577 aa		13.49	□□□□□ -0.25
SFI1-223	ENST00000484806	SYNJ1	O43426	1573 aa		13.49	□□□□□ -0.25
SFI1-223	ENST00000484806	CUX1	P39880	1505 aa		13.47	□□□□□ -0.25
SFI1-223	ENST00000484806	MRC2	Q9UBG0	1479 aa		13.47	□□□□□ -0.25
SFI1-223	ENST00000484806	TOPBP1	Q92547	1522 aa		13.44	□□□□□ -0.26
SFI1-223	ENST00000484806	URB2	Q14146	1524 aa	Known RBP	13.42	□□□□□ -0.26
SFI1-223	ENST00000484806	THOC2	Q8NI27	1593 aa	Known RBP	13.41	□□□□□ -0.26
SFI1-223	ENST00000484806	WDR62	O43379	1518 aa		13.4	□□□□□ -0.26
SFI1-223	ENST00000484806	FGD5	Q6ZNL6	1462 aa		13.37	□□□□□ -0.27
SFI1-223	ENST00000484806	POLA1	P09884	1462 aa	Predicted RBP	13.35	□□□□□ -0.27
SFI1-223	ENST00000484806	EEA1	Q15075	1411 aa		13.34	□□□□□ -0.27
SFI1-223	ENST00000484806	SOGA1	O94964	1423 aa		13.3	□□□□□ -0.28
SFI1-223	ENST00000484806	IFT140	Q96RY7	1462 aa		13.29	□□□□□ -0.28
SFI1-223	ENST00000484806	ABCA10	Q8WWZ4	1543 aa		13.29	□□□□□ -0.28
SFI1-223	ENST00000484806	KIF27	Q86VH2	1401 aa		13.28	□□□□□ -0.28
SFI1-223	ENST00000484806	WDR97	A6NE52	1622 aa		13.28	□□□□□ -0.28
SFI1-223	ENST00000484806	CUX2	O14529	1486 aa		13.25	□□□□□ -0.29
SFI1-223	ENST00000484806	TARBP1	Q13395	1621 aa	Known RBP	13.24	□□□□□ -0.29
SFI1-223	ENST00000484806	RAD54L2	Q9Y4B4	1467 aa		13.24	□□□□□ -0.29
SFI1-223	ENST00000484806	ABCA5	Q8WWZ7	1642 aa		13.2	□□□□□ -0.3
SFI1-223	ENST00000484806	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.18	□□□□□ -0.3
SFI1-223	ENST00000484806	CSRNP3	Q8WYN3	585 aa		13.17	□□□□□ -0.3
SFI1-223	ENST00000484806	GAPVD1	Q14C86	1478 aa		13.16	□□□□□ -0.3
SFI1-223	ENST00000484806	ERICH3	Q5RHP9	1530 aa		13.16	□□□□□ -0.3
SFI1-223	ENST00000484806	RUSC2	Q8N2Y8	1516 aa		13.16	□□□□□ -0.3
SFI1-223	ENST00000484806	CUL7	Q14999	1698 aa		13.15	□□□□□ -0.3
SFI1-223	ENST00000484806	PBRM1	Q86U86	1689 aa		13.15	□□□□□ -0.3
SFI1-223	ENST00000484806	EIF4G3	O43432	1585 aa	Known RBP	13.15	□□□□□ -0.3
SFI1-223	ENST00000484806	KIF21B	O75037	1637 aa		13.13	□□□□□ -0.31
SFI1-223	ENST00000484806	GRIN2B	Q13224	1484 aa		13.13	□□□□□ -0.31
SFI1-223	ENST00000484806	TDRD9	Q8NDG6	1382 aa	Known RBP	13.13	□□□□□ -0.31
SFI1-223	ENST00000484806	ZNF608	Q9ULD9	1512 aa	Predicted RBP	13.11	□□□□□ -0.31
SFI1-223	ENST00000484806	AQR	O60306	1485 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
SFI1-223	ENST00000484806	GOLGA3	Q08378	1498 aa		13.1	□□□□□ -0.31
SFI1-223	ENST00000484806	IGF1R	P08069	1367 aa		13.09	□□□□□ -0.31
SFI1-223	ENST00000484806	PRX	Q9BXM0	1461 aa		13.08	□□□□□ -0.32
SFI1-223	ENST00000484806	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.07	□□□□□ -0.32
SFI1-223	ENST00000484806	CARMIL1	Q5VZK9	1371 aa		13.07	□□□□□ -0.32
SFI1-223	ENST00000484806	RAPGEF2	Q9Y4G8	1499 aa		13.06	□□□□□ -0.32
SFI1-223	ENST00000484806	ADAMTS12	P58397	1594 aa		13.06	□□□□□ -0.32
SFI1-223	ENST00000484806	FHAD1	B1AJZ9	1412 aa		13.05	□□□□□ -0.32
SFI1-223	ENST00000484806	SNAPC4	Q5SXM2	1469 aa		13.04	□□□□□ -0.32
SFI1-223	ENST00000484806	UBTF	P17480	764 aa	Known RBP	12.99	□□□□□ -0.33
SFI1-223	ENST00000484806	SYNJ2	O15056	1496 aa		12.98	□□□□□ -0.33
SFI1-223	ENST00000484806	TNIK	Q9UKE5	1360 aa		12.97	□□□□□ -0.33
SFI1-223	ENST00000484806	LOC105371045	A0A1W2PR82	267 aa		12.97	□□□□□ -0.33
SFI1-223	ENST00000484806	CTTNBP2	Q8WZ74	1663 aa		12.96	□□□□□ -0.34
SFI1-223	ENST00000484806	EHMT2	Q96KQ7	1210 aa		12.95	□□□□□ -0.34
SFI1-223	ENST00000484806	GRIN2A	Q12879	1464 aa		12.94	□□□□□ -0.34
SFI1-223	ENST00000484806	CHMP7	Q8WUX9	453 aa	Predicted RBP	12.94	□□□□□ -0.34
SFI1-223	ENST00000484806	CHD1	O14646	1710 aa		12.91	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms