RNA–Protein interactions for RNA: ENST00000484743.5

GTF2A2-208, Transcript of general transcription factor IIA subunit 2, humanhuman

TSL 2 BASIC

Gene GTF2A2, Length 408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-208ENST00000484743 NISCHQ9Y2I1 1504 aa35.4■■■■□ 3.26
GTF2A2-208ENST00000484743 CCDC180Q9P1Z9 1646 aa31.5■■■□□ 2.63
GTF2A2-208ENST00000484743 ABCC9O60706 1549 aa30.78■■■□□ 2.52
GTF2A2-208ENST00000484743 RB1CC1Q8TDY2 1594 aa29.63■■■□□ 2.33
GTF2A2-208ENST00000484743 DCAF8L2P0C7V8 631 aa29.61■■■□□ 2.33
GTF2A2-208ENST00000484743 NACADO15069 1562 aa29.58■■■□□ 2.33
GTF2A2-208ENST00000484743 ZCCHC6Q5VYS8 1495 aaKnown RBP29.48■■■□□ 2.31
GTF2A2-208ENST00000484743 MYO15BQ96JP2 1530 aa29.37■■■□□ 2.29
GTF2A2-208ENST00000484743 DCAF1Q9Y4B6 1507 aa29.27■■■□□ 2.28
GTF2A2-208ENST00000484743 UNC13AQ9UPW8 1703 aa29.05■■■□□ 2.24
GTF2A2-208ENST00000484743 PABPN1Q86U42 306 aaKnown RBP eCLIP28.75■■■□□ 2.19
GTF2A2-208ENST00000484743 SCRIBQ14160 1630 aa28.75■■■□□ 2.19
GTF2A2-208ENST00000484743 BICRAQ9NZM4 1560 aa28.71■■■□□ 2.19
GTF2A2-208ENST00000484743 SHROOM4Q9ULL8 1493 aa28.38■■■□□ 2.13
GTF2A2-208ENST00000484743 DNAJC5BQ9UF47 199 aa28.36■■■□□ 2.13
GTF2A2-208ENST00000484743 EIF4G1Q04637 1599 aaKnown RBP27.95■■■□□ 2.07
GTF2A2-208ENST00000484743 CC2D2AQ9P2K1 1620 aa27.85■■■□□ 2.05
GTF2A2-208ENST00000484743 CECR2Q9BXF3 1484 aa27.64■■■□□ 2.01
GTF2A2-208ENST00000484743 SMARCA4P51532 1647 aa27.49■■□□□ 1.99
GTF2A2-208ENST00000484743 BAZ1AQ9NRL2 1556 aaPredicted RBP27.44■■□□□ 1.98
GTF2A2-208ENST00000484743 ATAD2BQ9ULI0 1458 aa27.3■■□□□ 1.96
GTF2A2-208ENST00000484743 SMARCA2P51531 1590 aa27.29■■□□□ 1.96
GTF2A2-208ENST00000484743 MROH2BQ7Z745 1585 aa27.29■■□□□ 1.96
GTF2A2-208ENST00000484743 NCAPD3P42695 1498 aa27.26■■□□□ 1.95
GTF2A2-208ENST00000484743 PEG3Q9GZU2 1588 aa27.18■■□□□ 1.94
GTF2A2-208ENST00000484743 HMGXB3Q12766 1538 aa27.16■■□□□ 1.94
GTF2A2-208ENST00000484743 BAZ1BQ9UIG0 1483 aaKnown RBP27.09■■□□□ 1.93
GTF2A2-208ENST00000484743 WIZO95785 1651 aa27.05■■□□□ 1.92
GTF2A2-208ENST00000484743 RSF1Q96T23 1441 aaPredicted RBP26.97■■□□□ 1.91
GTF2A2-208ENST00000484743 TOP2AP11388 1531 aaKnown RBP26.71■■□□□ 1.87
GTF2A2-208ENST00000484743 NESP48681 1621 aa26.64■■□□□ 1.85
GTF2A2-208ENST00000484743 LAMC3Q9Y6N6 1575 aa26.58■■□□□ 1.85
GTF2A2-208ENST00000484743 ERCC6Q03468 1493 aa26.54■■□□□ 1.84
GTF2A2-208ENST00000484743 CADPSQ9ULU8 1353 aa26.47■■□□□ 1.83
GTF2A2-208ENST00000484743 KIF21AQ7Z4S6 1674 aa26.39■■□□□ 1.82
GTF2A2-208ENST00000484743 CCDC88BA6NC98 1476 aa26.39■■□□□ 1.82
GTF2A2-208ENST00000484743 PDS5BQ9NTI5 1447 aa26.38■■□□□ 1.81
GTF2A2-208ENST00000484743 SUPT5HO00267 1087 aaKnown RBP26.35■■□□□ 1.81
GTF2A2-208ENST00000484743 CFTRP13569 1480 aa26.32■■□□□ 1.8
GTF2A2-208ENST00000484743 PRDM2Q13029 1718 aa26.27■■□□□ 1.8
GTF2A2-208ENST00000484743 THOC2Q8NI27 1593 aaKnown RBP26.24■■□□□ 1.79
GTF2A2-208ENST00000484743 CUX2O14529 1486 aa26.21■■□□□ 1.79
GTF2A2-208ENST00000484743 FANCD2Q9BXW9 1451 aa26.19■■□□□ 1.78
GTF2A2-208ENST00000484743 CEP164Q9UPV0 1460 aa26.17■■□□□ 1.78
GTF2A2-208ENST00000484743 MRC2Q9UBG0 1479 aa26.11■■□□□ 1.77
GTF2A2-208ENST00000484743 WDR62O43379 1518 aa26.02■■□□□ 1.76
GTF2A2-208ENST00000484743 DNAJC5Q9H3Z4 198 aa25.94■■□□□ 1.74
GTF2A2-208ENST00000484743 URB2Q14146 1524 aaKnown RBP25.93■■□□□ 1.74
GTF2A2-208ENST00000484743 TOPBP1Q92547 1522 aa25.78■■□□□ 1.72
GTF2A2-208ENST00000484743 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
GTF2A2-208ENST00000484743 DNMBPQ6XZF7 1577 aa25.77■■□□□ 1.72
GTF2A2-208ENST00000484743 IFT140Q96RY7 1462 aa25.6■■□□□ 1.69
GTF2A2-208ENST00000484743 CUX1P39880 1505 aa25.6■■□□□ 1.69
GTF2A2-208ENST00000484743 POLA1P09884 1462 aaPredicted RBP25.56■■□□□ 1.68
GTF2A2-208ENST00000484743 TARBP1Q13395 1621 aaKnown RBP25.52■■□□□ 1.68
GTF2A2-208ENST00000484743 FGD5Q6ZNL6 1462 aa25.51■■□□□ 1.67
GTF2A2-208ENST00000484743 ZNF608Q9ULD9 1512 aaPredicted RBP25.49■■□□□ 1.67
GTF2A2-208ENST00000484743 RAD54L2Q9Y4B4 1467 aa25.46■■□□□ 1.67
GTF2A2-208ENST00000484743 SOGA1O94964 1423 aa25.46■■□□□ 1.67
GTF2A2-208ENST00000484743 WRNQ14191 1432 aaPredicted RBP eCLIP25.44■■□□□ 1.66
GTF2A2-208ENST00000484743 BIVM-ERCC5R4GMW8 1640 aa25.42■■□□□ 1.66
GTF2A2-208ENST00000484743 EIF4G3O43432 1585 aaKnown RBP25.42■■□□□ 1.66
GTF2A2-208ENST00000484743 TOP2BQ02880 1626 aa25.41■■□□□ 1.66
GTF2A2-208ENST00000484743 SYNJ1O43426 1573 aa25.39■■□□□ 1.66
GTF2A2-208ENST00000484743 AQRO60306 1485 aaKnown RBP eCLIP25.35■■□□□ 1.652e-8■□□□□ 8.7
GTF2A2-208ENST00000484743 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
GTF2A2-208ENST00000484743 TDRD9Q8NDG6 1382 aaKnown RBP25.31■■□□□ 1.64
GTF2A2-208ENST00000484743 ABCA10Q8WWZ4 1543 aa25.26■■□□□ 1.63
GTF2A2-208ENST00000484743 PBRM1Q86U86 1689 aa25.19■■□□□ 1.62
GTF2A2-208ENST00000484743 ABCA5Q8WWZ7 1642 aa25.18■■□□□ 1.62
GTF2A2-208ENST00000484743 GAPVD1Q14C86 1478 aa25.17■■□□□ 1.62
GTF2A2-208ENST00000484743 GRIN2BQ13224 1484 aa25.15■■□□□ 1.62
GTF2A2-208ENST00000484743 CHD1O14646 1710 aa25.15■■□□□ 1.62
GTF2A2-208ENST00000484743 OSCARQ8IYS5 282 aa25.14■■□□□ 1.62
GTF2A2-208ENST00000484743 SNAPC4Q5SXM2 1469 aa25.12■■□□□ 1.61
GTF2A2-208ENST00000484743 MAGI1Q96QZ7 1491 aaPredicted RBP25.09■■□□□ 1.61
GTF2A2-208ENST00000484743 FBLN2P98095 1184 aa25.08■■□□□ 1.61
GTF2A2-208ENST00000484743 SYNJ2O15056 1496 aa24.99■■□□□ 1.59
GTF2A2-208ENST00000484743 CHMP7Q8WUX9 453 aaPredicted RBP24.99■■□□□ 1.59
GTF2A2-208ENST00000484743 ERICH3Q5RHP9 1530 aa24.96■■□□□ 1.59
GTF2A2-208ENST00000484743 ADAMTS12P58397 1594 aa24.93■■□□□ 1.58
GTF2A2-208ENST00000484743 KIF27Q86VH2 1401 aa24.91■■□□□ 1.58
GTF2A2-208ENST00000484743 TRIM41Q8WV44 630 aa24.87■■□□□ 1.57
GTF2A2-208ENST00000484743 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
GTF2A2-208ENST00000484743 GRIN2AQ12879 1464 aa24.83■■□□□ 1.57
GTF2A2-208ENST00000484743 CLASP1Q7Z460 1538 aa24.8■■□□□ 1.56
GTF2A2-208ENST00000484743 IGF1RP08069 1367 aa24.79■■□□□ 1.56
GTF2A2-208ENST00000484743 RIMBP3CA6NJZ7 1639 aa24.78■■□□□ 1.56
GTF2A2-208ENST00000484743 RIMBP3BA6NNM3 1639 aa24.78■■□□□ 1.56
GTF2A2-208ENST00000484743 RIMBP3Q9UFD9 1639 aa24.78■■□□□ 1.56
GTF2A2-208ENST00000484743 CUL7Q14999 1698 aa24.78■■□□□ 1.56
GTF2A2-208ENST00000484743 ARHGEF11O15085 1522 aa24.74■■□□□ 1.55
GTF2A2-208ENST00000484743 CEP170Q5SW79 1584 aa24.72■■□□□ 1.55
GTF2A2-208ENST00000484743 NUP160Q12769 1436 aa24.7■■□□□ 1.55
GTF2A2-208ENST00000484743 RUSC2Q8N2Y8 1516 aa24.7■■□□□ 1.54
GTF2A2-208ENST00000484743 CARMIL1Q5VZK9 1371 aa24.66■■□□□ 1.54
GTF2A2-208ENST00000484743 CHIC1Q5VXU3 224 aa24.58■■□□□ 1.53
GTF2A2-208ENST00000484743 SHROOM2Q13796 1616 aa24.55■■□□□ 1.52
GTF2A2-208ENST00000484743 ARAP1Q96P48 1450 aa24.53■■□□□ 1.52
GTF2A2-208ENST00000484743 RAPGEF2Q9Y4G8 1499 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms