RNA–Protein interactions for RNA: ENST00000484358.1

RPL3-216, Transcript of ribosomal protein L3, humanhuman

TSL 2

Gene RPL3, Length 557 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-216ENST00000484358 NISCHQ9Y2I1 1504 aa31.2■■■□□ 2.59
RPL3-216ENST00000484358 CCDC180Q9P1Z9 1646 aa27.52■■■□□ 2
RPL3-216ENST00000484358 ABCC9O60706 1549 aa26.77■■□□□ 1.88
RPL3-216ENST00000484358 ZCCHC6Q5VYS8 1495 aaKnown RBP26.15■■□□□ 1.78
RPL3-216ENST00000484358 DCAF1Q9Y4B6 1507 aa25.92■■□□□ 1.74
RPL3-216ENST00000484358 MYO15BQ96JP2 1530 aa25.78■■□□□ 1.72
RPL3-216ENST00000484358 DCAF8L2P0C7V8 631 aa25.74■■□□□ 1.71
RPL3-216ENST00000484358 NACADO15069 1562 aa25.68■■□□□ 1.7
RPL3-216ENST00000484358 RB1CC1Q8TDY2 1594 aa25.52■■□□□ 1.68
RPL3-216ENST00000484358 DNAJC5BQ9UF47 199 aa25.15■■□□□ 1.62
RPL3-216ENST00000484358 SCRIBQ14160 1630 aa25.06■■□□□ 1.6
RPL3-216ENST00000484358 SHROOM4Q9ULL8 1493 aa25.01■■□□□ 1.59
RPL3-216ENST00000484358 PABPN1Q86U42 306 aaKnown RBP eCLIP24.9■■□□□ 1.58
RPL3-216ENST00000484358 UNC13AQ9UPW8 1703 aa24.89■■□□□ 1.57
RPL3-216ENST00000484358 BICRAQ9NZM4 1560 aa24.63■■□□□ 1.53
RPL3-216ENST00000484358 BAZ1AQ9NRL2 1556 aaPredicted RBP24.19■■□□□ 1.46
RPL3-216ENST00000484358 CC2D2AQ9P2K1 1620 aa24.16■■□□□ 1.46
RPL3-216ENST00000484358 CECR2Q9BXF3 1484 aa24.14■■□□□ 1.46
RPL3-216ENST00000484358 EIF4G1Q04637 1599 aaKnown RBP24.08■■□□□ 1.45
RPL3-216ENST00000484358 SMARCA4P51532 1647 aa24.07■■□□□ 1.44
RPL3-216ENST00000484358 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
RPL3-216ENST00000484358 MROH2BQ7Z745 1585 aa24■■□□□ 1.43
RPL3-216ENST00000484358 SUPT5HO00267 1087 aaKnown RBP23.95■■□□□ 1.42
RPL3-216ENST00000484358 PEG3Q9GZU2 1588 aa23.84■■□□□ 1.41
RPL3-216ENST00000484358 SMARCA2P51531 1590 aa23.83■■□□□ 1.41
RPL3-216ENST00000484358 WIZO95785 1651 aa23.8■■□□□ 1.4
RPL3-216ENST00000484358 ATAD2BQ9ULI0 1458 aa23.72■■□□□ 1.39
RPL3-216ENST00000484358 TOP2AP11388 1531 aaKnown RBP23.66■■□□□ 1.38
RPL3-216ENST00000484358 HMGXB3Q12766 1538 aa23.63■■□□□ 1.37
RPL3-216ENST00000484358 NCAPD3P42695 1498 aa23.62■■□□□ 1.37
RPL3-216ENST00000484358 BAZ1BQ9UIG0 1483 aaKnown RBP23.62■■□□□ 1.37
RPL3-216ENST00000484358 CCDC88BA6NC98 1476 aa23.31■■□□□ 1.32
RPL3-216ENST00000484358 DNAJC5Q9H3Z4 198 aa23.27■■□□□ 1.32
RPL3-216ENST00000484358 ERCC6Q03468 1493 aa23.19■■□□□ 1.3
RPL3-216ENST00000484358 CUX2O14529 1486 aa23.15■■□□□ 1.3
RPL3-216ENST00000484358 PRDM2Q13029 1718 aa22.99■■□□□ 1.27
RPL3-216ENST00000484358 CFTRP13569 1480 aa22.99■■□□□ 1.27
RPL3-216ENST00000484358 CADPSQ9ULU8 1353 aa22.98■■□□□ 1.27
RPL3-216ENST00000484358 LAMC3Q9Y6N6 1575 aa22.93■■□□□ 1.26
RPL3-216ENST00000484358 NESP48681 1621 aa22.92■■□□□ 1.26
RPL3-216ENST00000484358 CHIC1Q5VXU3 224 aa22.78■■□□□ 1.24
RPL3-216ENST00000484358 PDS5BQ9NTI5 1447 aa22.76■■□□□ 1.23
RPL3-216ENST00000484358 THOC2Q8NI27 1593 aaKnown RBP22.72■■□□□ 1.23
RPL3-216ENST00000484358 FANCD2Q9BXW9 1451 aa22.71■■□□□ 1.23
RPL3-216ENST00000484358 WRNQ14191 1432 aaPredicted RBP eCLIP22.67■■□□□ 1.22
RPL3-216ENST00000484358 ABCC8Q09428 1581 aa22.66■■□□□ 1.22
RPL3-216ENST00000484358 TRIM41Q8WV44 630 aa22.65■■□□□ 1.22
RPL3-216ENST00000484358 CEP164Q9UPV0 1460 aa22.65■■□□□ 1.22
RPL3-216ENST00000484358 KIF21AQ7Z4S6 1674 aa22.64■■□□□ 1.21
RPL3-216ENST00000484358 TOP2BQ02880 1626 aa22.56■■□□□ 1.2
RPL3-216ENST00000484358 BIVM-ERCC5R4GMW8 1640 aa22.56■■□□□ 1.2
RPL3-216ENST00000484358 SYNJ1O43426 1573 aa22.52■■□□□ 1.2
RPL3-216ENST00000484358 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
RPL3-216ENST00000484358 CUX1P39880 1505 aa22.49■■□□□ 1.19
RPL3-216ENST00000484358 MRC2Q9UBG0 1479 aa22.48■■□□□ 1.19
RPL3-216ENST00000484358 TOPBP1Q92547 1522 aa22.42■■□□□ 1.18
RPL3-216ENST00000484358 WDR62O43379 1518 aa22.4■■□□□ 1.18
RPL3-216ENST00000484358 URB2Q14146 1524 aaKnown RBP22.39■■□□□ 1.17
RPL3-216ENST00000484358 FGD5Q6ZNL6 1462 aa22.33■■□□□ 1.16
RPL3-216ENST00000484358 EEA1Q15075 1411 aa22.31■■□□□ 1.16
RPL3-216ENST00000484358 AEBP2Q6ZN18 517 aaPredicted RBP22.27■■□□□ 1.16
RPL3-216ENST00000484358 POLA1P09884 1462 aaPredicted RBP22.27■■□□□ 1.16
RPL3-216ENST00000484358 SOGA1O94964 1423 aa22.21■■□□□ 1.15
RPL3-216ENST00000484358 KIF27Q86VH2 1401 aa22.19■■□□□ 1.14
RPL3-216ENST00000484358 ABCA10Q8WWZ4 1543 aa22.18■■□□□ 1.14
RPL3-216ENST00000484358 IFT140Q96RY7 1462 aa22.15■■□□□ 1.14
RPL3-216ENST00000484358 WDR97A6NE52 1622 aa22.13■■□□□ 1.13
RPL3-216ENST00000484358 RAD54L2Q9Y4B4 1467 aa22.11■■□□□ 1.13
RPL3-216ENST00000484358 TARBP1Q13395 1621 aaKnown RBP22.11■■□□□ 1.13
RPL3-216ENST00000484358 OSCARQ8IYS5 282 aa22.1■■□□□ 1.13
RPL3-216ENST00000484358 FAM9AQ8IZU1 332 aaPredicted RBP22.07■■□□□ 1.12
RPL3-216ENST00000484358 CSRNP3Q8WYN3 585 aa22.06■■□□□ 1.12
RPL3-216ENST00000484358 RUSC2Q8N2Y8 1516 aa22.03■■□□□ 1.12
RPL3-216ENST00000484358 ABCA5Q8WWZ7 1642 aa22.02■■□□□ 1.11
RPL3-216ENST00000484358 GAPVD1Q14C86 1478 aa21.98■■□□□ 1.11
RPL3-216ENST00000484358 ERICH3Q5RHP9 1530 aa21.96■■□□□ 1.11
RPL3-216ENST00000484358 KIF21BO75037 1637 aa21.96■■□□□ 1.11
RPL3-216ENST00000484358 TDRD9Q8NDG6 1382 aaKnown RBP21.94■■□□□ 1.1
RPL3-216ENST00000484358 CUL7Q14999 1698 aa21.94■■□□□ 1.1
RPL3-216ENST00000484358 PBRM1Q86U86 1689 aa21.91■■□□□ 1.1
RPL3-216ENST00000484358 IGF1RP08069 1367 aa21.91■■□□□ 1.1
RPL3-216ENST00000484358 EIF4G3O43432 1585 aaKnown RBP21.9■■□□□ 1.1
RPL3-216ENST00000484358 GOLGA3Q08378 1498 aa21.9■■□□□ 1.1
RPL3-216ENST00000484358 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
RPL3-216ENST00000484358 PRXQ9BXM0 1461 aa21.89■■□□□ 1.09
RPL3-216ENST00000484358 ZNF608Q9ULD9 1512 aaPredicted RBP21.86■■□□□ 1.09
RPL3-216ENST00000484358 AQRO60306 1485 aaKnown RBP eCLIP21.85■■□□□ 1.097e-12■■■■■ 38.9
RPL3-216ENST00000484358 CARMIL1Q5VZK9 1371 aa21.85■■□□□ 1.09
RPL3-216ENST00000484358 RAPGEF2Q9Y4G8 1499 aa21.82■■□□□ 1.08
RPL3-216ENST00000484358 MAGI1Q96QZ7 1491 aaPredicted RBP21.78■■□□□ 1.08
RPL3-216ENST00000484358 LOC105371045A0A1W2PR82 267 aa21.78■■□□□ 1.08
RPL3-216ENST00000484358 RIMBP3CA6NJZ7 1639 aa21.77■■□□□ 1.08
RPL3-216ENST00000484358 RIMBP3BA6NNM3 1639 aa21.77■■□□□ 1.08
RPL3-216ENST00000484358 RIMBP3Q9UFD9 1639 aa21.77■■□□□ 1.08
RPL3-216ENST00000484358 FHAD1B1AJZ9 1412 aa21.77■■□□□ 1.08
RPL3-216ENST00000484358 ADAMTS12P58397 1594 aa21.75■■□□□ 1.07
RPL3-216ENST00000484358 UBTFP17480 764 aaKnown RBP21.75■■□□□ 1.07
RPL3-216ENST00000484358 TNIKQ9UKE5 1360 aa21.74■■□□□ 1.07
RPL3-216ENST00000484358 SNAPC4Q5SXM2 1469 aa21.71■■□□□ 1.07
RPL3-216ENST00000484358 ARHGEF11O15085 1522 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms