RNA–Protein interactions for RNA: ENST00000484313.3

ZEB2-222, Transcript of zinc finger E-box binding homeobox 2, humanhuman

TSL 1 (best)

Gene ZEB2, Length 845 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-222ENST00000484313 CHIC1Q5VXU3 224 aa23.59■■□□□ 1.37
ZEB2-222ENST00000484313 AEBP2Q6ZN18 517 aaPredicted RBP23.42■■□□□ 1.34
ZEB2-222ENST00000484313 NISCHQ9Y2I1 1504 aa21.39■■□□□ 1.02
ZEB2-222ENST00000484313 PHF23Q9BUL5 403 aaPredicted RBP20.86■□□□□ 0.93
ZEB2-222ENST00000484313 SENP3Q9H4L4 574 aaPredicted RBP19.72■□□□□ 0.75
ZEB2-222ENST00000484313 PLPPR3Q6T4P5 718 aa19.48■□□□□ 0.71
ZEB2-222ENST00000484313 CCDC180Q9P1Z9 1646 aa19.36■□□□□ 0.69
ZEB2-222ENST00000484313 ABCC9O60706 1549 aa19.22■□□□□ 0.67
ZEB2-222ENST00000484313 RB1CC1Q8TDY2 1594 aa18.34■□□□□ 0.53
ZEB2-222ENST00000484313 ADRA2BP18089 450 aa18.24■□□□□ 0.51
ZEB2-222ENST00000484313 FOXD1Q16676 465 aa18.24■□□□□ 0.51
ZEB2-222ENST00000484313 NACADO15069 1562 aa18.22■□□□□ 0.51
ZEB2-222ENST00000484313 PPP6R1Q9UPN7 881 aa18.16■□□□□ 0.5
ZEB2-222ENST00000484313 DNAJC5BQ9UF47 199 aa18.1■□□□□ 0.49
ZEB2-222ENST00000484313 UNC13AQ9UPW8 1703 aa18.08■□□□□ 0.48
ZEB2-222ENST00000484313 MYO15BQ96JP2 1530 aa18.03■□□□□ 0.48
ZEB2-222ENST00000484313 BICRAQ9NZM4 1560 aa17.92■□□□□ 0.46
ZEB2-222ENST00000484313 ZCCHC6Q5VYS8 1495 aaKnown RBP17.77■□□□□ 0.44
ZEB2-222ENST00000484313 PABPN1Q86U42 306 aaKnown RBP eCLIP17.76■□□□□ 0.43
ZEB2-222ENST00000484313 DCAF1Q9Y4B6 1507 aa17.76■□□□□ 0.43
ZEB2-222ENST00000484313 KCNA4P22459 653 aa17.72■□□□□ 0.43
ZEB2-222ENST00000484313 DCAF8L2P0C7V8 631 aa17.68■□□□□ 0.42
ZEB2-222ENST00000484313 SHROOM4Q9ULL8 1493 aa17.68■□□□□ 0.42
ZEB2-222ENST00000484313 SCRIBQ14160 1630 aa17.5■□□□□ 0.39
ZEB2-222ENST00000484313 CC2D2AQ9P2K1 1620 aa17.46■□□□□ 0.39
ZEB2-222ENST00000484313 EIF4G1Q04637 1599 aaKnown RBP17.42■□□□□ 0.38
ZEB2-222ENST00000484313 PIAS4Q8N2W9 510 aaPredicted RBP17.35■□□□□ 0.37
ZEB2-222ENST00000484313 EHMT2Q96KQ7 1210 aa17.35■□□□□ 0.37
ZEB2-222ENST00000484313 CECR2Q9BXF3 1484 aa17.35■□□□□ 0.37
ZEB2-222ENST00000484313 POTEDQ86YR6 584 aa17.32■□□□□ 0.36
ZEB2-222ENST00000484313 PPP4R3CPQ6ZMV5 832 aa17.28■□□□□ 0.36
ZEB2-222ENST00000484313 MSH5O43196 834 aa17.12■□□□□ 0.33
ZEB2-222ENST00000484313 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
ZEB2-222ENST00000484313 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
ZEB2-222ENST00000484313 CSRNP3Q8WYN3 585 aa16.86■□□□□ 0.29
ZEB2-222ENST00000484313 NCAPD3P42695 1498 aa16.8■□□□□ 0.28
ZEB2-222ENST00000484313 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
ZEB2-222ENST00000484313 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
ZEB2-222ENST00000484313 HMGXB3Q12766 1538 aa16.74■□□□□ 0.27
ZEB2-222ENST00000484313 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
ZEB2-222ENST00000484313 SMARCA2P51531 1590 aa16.68■□□□□ 0.26
ZEB2-222ENST00000484313 CUX2O14529 1486 aa16.68■□□□□ 0.26
ZEB2-222ENST00000484313 DNAJC5Q9H3Z4 198 aa16.66■□□□□ 0.26
ZEB2-222ENST00000484313 PEG3Q9GZU2 1588 aa16.65■□□□□ 0.26
ZEB2-222ENST00000484313 CNKSR2Q8WXI2 1034 aa16.62■□□□□ 0.25
ZEB2-222ENST00000484313 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
ZEB2-222ENST00000484313 BAZ1AQ9NRL2 1556 aaPredicted RBP16.6■□□□□ 0.25
ZEB2-222ENST00000484313 ERCC6Q03468 1493 aa16.54■□□□□ 0.24
ZEB2-222ENST00000484313 NESP48681 1621 aa16.53■□□□□ 0.24
ZEB2-222ENST00000484313 THOC2Q8NI27 1593 aaKnown RBP16.52■□□□□ 0.24
ZEB2-222ENST00000484313 BAZ1BQ9UIG0 1483 aaKnown RBP16.52■□□□□ 0.23
ZEB2-222ENST00000484313 MROH2BQ7Z745 1585 aa16.47■□□□□ 0.23
ZEB2-222ENST00000484313 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
ZEB2-222ENST00000484313 KIF21AQ7Z4S6 1674 aa16.41■□□□□ 0.22
ZEB2-222ENST00000484313 ZBTB22O15209 634 aa16.32■□□□□ 0.2
ZEB2-222ENST00000484313 WIZO95785 1651 aa16.28■□□□□ 0.2
ZEB2-222ENST00000484313 MAPK8IP2Q13387 824 aaPredicted RBP16.27■□□□□ 0.2
ZEB2-222ENST00000484313 PDS5BQ9NTI5 1447 aa16.26■□□□□ 0.19
ZEB2-222ENST00000484313 WDR62O43379 1518 aa16.24■□□□□ 0.19
ZEB2-222ENST00000484313 CADPSQ9ULU8 1353 aa16.22■□□□□ 0.19
ZEB2-222ENST00000484313 MRC2Q9UBG0 1479 aa16.19■□□□□ 0.18
ZEB2-222ENST00000484313 RNF216Q9NWF9 866 aaPredicted RBP16.12■□□□□ 0.17
ZEB2-222ENST00000484313 TOP2AP11388 1531 aaKnown RBP16.09■□□□□ 0.17
ZEB2-222ENST00000484313 CFTRP13569 1480 aa16.09■□□□□ 0.17
ZEB2-222ENST00000484313 CEP164Q9UPV0 1460 aa16.09■□□□□ 0.17
ZEB2-222ENST00000484313 FOXD4L1Q9NU39 408 aa16.08■□□□□ 0.16
ZEB2-222ENST00000484313 RSF1Q96T23 1441 aaPredicted RBP16.07■□□□□ 0.16
ZEB2-222ENST00000484313 PRDM2Q13029 1718 aa16.06■□□□□ 0.16
ZEB2-222ENST00000484313 FANCD2Q9BXW9 1451 aa16.05■□□□□ 0.16
ZEB2-222ENST00000484313 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
ZEB2-222ENST00000484313 DMRT2Q9Y5R5 561 aa15.88■□□□□ 0.13
ZEB2-222ENST00000484313 HOXD11P31277 338 aaPredicted RBP15.86■□□□□ 0.13
ZEB2-222ENST00000484313 CCDC88BA6NC98 1476 aa15.84■□□□□ 0.13
ZEB2-222ENST00000484313 TOPBP1Q92547 1522 aa15.78■□□□□ 0.12
ZEB2-222ENST00000484313 IFT140Q96RY7 1462 aa15.78■□□□□ 0.12
ZEB2-222ENST00000484313 ZNF608Q9ULD9 1512 aaPredicted RBP15.77■□□□□ 0.11
ZEB2-222ENST00000484313 EIF4G3O43432 1585 aaKnown RBP15.75■□□□□ 0.11
ZEB2-222ENST00000484313 DNMBPQ6XZF7 1577 aa15.75■□□□□ 0.11
ZEB2-222ENST00000484313 RIMBP3CA6NJZ7 1639 aa15.73■□□□□ 0.11
ZEB2-222ENST00000484313 RIMBP3BA6NNM3 1639 aa15.73■□□□□ 0.11
ZEB2-222ENST00000484313 RIMBP3Q9UFD9 1639 aa15.73■□□□□ 0.11
ZEB2-222ENST00000484313 TRIM41Q8WV44 630 aa15.73■□□□□ 0.11
ZEB2-222ENST00000484313 TARBP1Q13395 1621 aaKnown RBP15.72■□□□□ 0.11
ZEB2-222ENST00000484313 OSCARQ8IYS5 282 aa15.71■□□□□ 0.11
ZEB2-222ENST00000484313 ABCC8Q09428 1581 aa15.7■□□□□ 0.1
ZEB2-222ENST00000484313 SLC4A2P04920 1241 aa15.69■□□□□ 0.1
ZEB2-222ENST00000484313 CHD1O14646 1710 aa15.65■□□□□ 0.1
ZEB2-222ENST00000484313 ARHGEF11O15085 1522 aa15.64■□□□□ 0.09
ZEB2-222ENST00000484313 POLA1P09884 1462 aaPredicted RBP15.61■□□□□ 0.09
ZEB2-222ENST00000484313 WDR97A6NE52 1622 aa15.57■□□□□ 0.08
ZEB2-222ENST00000484313 AQRO60306 1485 aaKnown RBP eCLIP15.54■□□□□ 0.08
ZEB2-222ENST00000484313 ARAP1Q96P48 1450 aa15.51■□□□□ 0.07
ZEB2-222ENST00000484313 CUX1P39880 1505 aa15.5■□□□□ 0.07
ZEB2-222ENST00000484313 CLASP1Q7Z460 1538 aa15.5■□□□□ 0.07
ZEB2-222ENST00000484313 RAD54L2Q9Y4B4 1467 aa15.5■□□□□ 0.07
ZEB2-222ENST00000484313 FGD5Q6ZNL6 1462 aa15.48■□□□□ 0.07
ZEB2-222ENST00000484313 MYCNP04198 464 aaPredicted RBP15.48■□□□□ 0.07
ZEB2-222ENST00000484313 ATXN8OSP0DMR3 200 aa15.48■□□□□ 0.07
ZEB2-222ENST00000484313 SNAPC4Q5SXM2 1469 aa15.44■□□□□ 0.06
ZEB2-222ENST00000484313 MAGI1Q96QZ7 1491 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms