RNA–Protein interactions for RNA: ENST00000484286.1

P4HB-213, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 2

Gene P4HB, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-213ENST00000484286 NISCHQ9Y2I1 1504 aa36.1■■■■□ 3.37
P4HB-213ENST00000484286 AEBP2Q6ZN18 517 aaPredicted RBP33.39■■■□□ 2.94
P4HB-213ENST00000484286 CHIC1Q5VXU3 224 aa32.75■■■□□ 2.83
P4HB-213ENST00000484286 CCDC180Q9P1Z9 1646 aa32.11■■■□□ 2.73
P4HB-213ENST00000484286 ABCC9O60706 1549 aa31.44■■■□□ 2.62
P4HB-213ENST00000484286 DCAF8L2P0C7V8 631 aa30.3■■■□□ 2.44
P4HB-213ENST00000484286 RB1CC1Q8TDY2 1594 aa30.28■■■□□ 2.44
P4HB-213ENST00000484286 NACADO15069 1562 aa30.22■■■□□ 2.43
P4HB-213ENST00000484286 ZCCHC6Q5VYS8 1495 aaKnown RBP30.07■■■□□ 2.4
P4HB-213ENST00000484286 MYO15BQ96JP2 1530 aa30.02■■■□□ 2.4
P4HB-213ENST00000484286 DCAF1Q9Y4B6 1507 aa29.89■■■□□ 2.38
P4HB-213ENST00000484286 UNC13AQ9UPW8 1703 aa29.4■■■□□ 2.3
P4HB-213ENST00000484286 PABPN1Q86U42 306 aaKnown RBP eCLIP29.38■■■□□ 2.29
P4HB-213ENST00000484286 SCRIBQ14160 1630 aa29.3■■■□□ 2.28
P4HB-213ENST00000484286 BICRAQ9NZM4 1560 aa29.22■■■□□ 2.27
P4HB-213ENST00000484286 SHROOM4Q9ULL8 1493 aa29.08■■■□□ 2.25
P4HB-213ENST00000484286 PHF23Q9BUL5 403 aaPredicted RBP28.84■■■□□ 2.21
P4HB-213ENST00000484286 DNAJC5BQ9UF47 199 aa28.75■■■□□ 2.19
P4HB-213ENST00000484286 EIF4G1Q04637 1599 aaKnown RBP28.54■■■□□ 2.16
P4HB-213ENST00000484286 CC2D2AQ9P2K1 1620 aa28.4■■■□□ 2.14
P4HB-213ENST00000484286 SENP3Q9H4L4 574 aaPredicted RBP28.28■■■□□ 2.12
P4HB-213ENST00000484286 CECR2Q9BXF3 1484 aa28.27■■■□□ 2.12
P4HB-213ENST00000484286 BAZ1AQ9NRL2 1556 aaPredicted RBP28.03■■■□□ 2.08
P4HB-213ENST00000484286 SMARCA4P51532 1647 aa28.01■■■□□ 2.07
P4HB-213ENST00000484286 SMARCA2P51531 1590 aa27.9■■■□□ 2.06
P4HB-213ENST00000484286 NCAPD3P42695 1498 aa27.87■■■□□ 2.05
P4HB-213ENST00000484286 ATAD2BQ9ULI0 1458 aa27.87■■■□□ 2.05
P4HB-213ENST00000484286 MROH2BQ7Z745 1585 aa27.79■■■□□ 2.04
P4HB-213ENST00000484286 HMGXB3Q12766 1538 aa27.74■■■□□ 2.03
P4HB-213ENST00000484286 PEG3Q9GZU2 1588 aa27.73■■■□□ 2.03
P4HB-213ENST00000484286 BAZ1BQ9UIG0 1483 aaKnown RBP27.7■■■□□ 2.03
P4HB-213ENST00000484286 RSF1Q96T23 1441 aaPredicted RBP27.5■■□□□ 1.99
P4HB-213ENST00000484286 WIZO95785 1651 aa27.48■■□□□ 1.99
P4HB-213ENST00000484286 TOP2AP11388 1531 aaKnown RBP27.26■■□□□ 1.95
P4HB-213ENST00000484286 ERCC6Q03468 1493 aa27.19■■□□□ 1.94
P4HB-213ENST00000484286 LAMC3Q9Y6N6 1575 aa27.15■■□□□ 1.94
P4HB-213ENST00000484286 NESP48681 1621 aa27.15■■□□□ 1.94
P4HB-213ENST00000484286 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
P4HB-213ENST00000484286 PDS5BQ9NTI5 1447 aa27.03■■□□□ 1.92
P4HB-213ENST00000484286 CCDC88BA6NC98 1476 aa26.91■■□□□ 1.9
P4HB-213ENST00000484286 CFTRP13569 1480 aa26.9■■□□□ 1.9
P4HB-213ENST00000484286 SUPT5HO00267 1087 aaKnown RBP26.89■■□□□ 1.9
P4HB-213ENST00000484286 CUX2O14529 1486 aa26.86■■□□□ 1.89
P4HB-213ENST00000484286 KIF21AQ7Z4S6 1674 aa26.81■■□□□ 1.88
P4HB-213ENST00000484286 FANCD2Q9BXW9 1451 aa26.77■■□□□ 1.88
P4HB-213ENST00000484286 CEP164Q9UPV0 1460 aa26.77■■□□□ 1.88
P4HB-213ENST00000484286 THOC2Q8NI27 1593 aaKnown RBP26.74■■□□□ 1.87
P4HB-213ENST00000484286 MRC2Q9UBG0 1479 aa26.71■■□□□ 1.87
P4HB-213ENST00000484286 PLPPR3Q6T4P5 718 aa26.68■■□□□ 1.86
P4HB-213ENST00000484286 PRDM2Q13029 1718 aa26.62■■□□□ 1.85
P4HB-213ENST00000484286 WDR62O43379 1518 aa26.59■■□□□ 1.85
P4HB-213ENST00000484286 URB2Q14146 1524 aaKnown RBP26.44■■□□□ 1.82
P4HB-213ENST00000484286 ABCC8Q09428 1581 aa26.4■■□□□ 1.82
P4HB-213ENST00000484286 TOPBP1Q92547 1522 aa26.31■■□□□ 1.8
P4HB-213ENST00000484286 DNMBPQ6XZF7 1577 aa26.29■■□□□ 1.8
P4HB-213ENST00000484286 FOXD1Q16676 465 aa26.26■■□□□ 1.79
P4HB-213ENST00000484286 IFT140Q96RY7 1462 aa26.2■■□□□ 1.78
P4HB-213ENST00000484286 POLA1P09884 1462 aaPredicted RBP26.09■■□□□ 1.77
P4HB-213ENST00000484286 CUX1P39880 1505 aa26.09■■□□□ 1.77
P4HB-213ENST00000484286 FGD5Q6ZNL6 1462 aa26.04■■□□□ 1.76
P4HB-213ENST00000484286 SOGA1O94964 1423 aa26.03■■□□□ 1.76
P4HB-213ENST00000484286 ZNF608Q9ULD9 1512 aaPredicted RBP26■■□□□ 1.75
P4HB-213ENST00000484286 DNAJC5Q9H3Z4 198 aa26■■□□□ 1.75
P4HB-213ENST00000484286 WRNQ14191 1432 aaPredicted RBP eCLIP25.99■■□□□ 1.75
P4HB-213ENST00000484286 TARBP1Q13395 1621 aaKnown RBP25.98■■□□□ 1.75
P4HB-213ENST00000484286 RAD54L2Q9Y4B4 1467 aa25.96■■□□□ 1.75
P4HB-213ENST00000484286 EIF4G3O43432 1585 aaKnown RBP25.92■■□□□ 1.74
P4HB-213ENST00000484286 AQRO60306 1485 aaKnown RBP eCLIP25.89■■□□□ 1.733e-18■■■■□ 21.2
P4HB-213ENST00000484286 TOP2BQ02880 1626 aa25.88■■□□□ 1.73
P4HB-213ENST00000484286 TDRD9Q8NDG6 1382 aaKnown RBP25.86■■□□□ 1.73
P4HB-213ENST00000484286 WDR97A6NE52 1622 aa25.86■■□□□ 1.73
P4HB-213ENST00000484286 BIVM-ERCC5R4GMW8 1640 aa25.85■■□□□ 1.73
P4HB-213ENST00000484286 SYNJ1O43426 1573 aa25.84■■□□□ 1.73
P4HB-213ENST00000484286 ABCA10Q8WWZ4 1543 aa25.78■■□□□ 1.72
P4HB-213ENST00000484286 OSCARQ8IYS5 282 aa25.78■■□□□ 1.72
P4HB-213ENST00000484286 GRIN2BQ13224 1484 aa25.73■■□□□ 1.71
P4HB-213ENST00000484286 GAPVD1Q14C86 1478 aa25.72■■□□□ 1.71
P4HB-213ENST00000484286 FBLN2P98095 1184 aa25.69■■□□□ 1.7
P4HB-213ENST00000484286 SNAPC4Q5SXM2 1469 aa25.66■■□□□ 1.7
P4HB-213ENST00000484286 MAGI1Q96QZ7 1491 aaPredicted RBP25.66■■□□□ 1.7
P4HB-213ENST00000484286 ABCA5Q8WWZ7 1642 aa25.64■■□□□ 1.7
P4HB-213ENST00000484286 CHMP7Q8WUX9 453 aaPredicted RBP25.61■■□□□ 1.69
P4HB-213ENST00000484286 PBRM1Q86U86 1689 aa25.59■■□□□ 1.69
P4HB-213ENST00000484286 SYNJ2O15056 1496 aa25.56■■□□□ 1.68
P4HB-213ENST00000484286 CHD1O14646 1710 aa25.55■■□□□ 1.68
P4HB-213ENST00000484286 ERICH3Q5RHP9 1530 aa25.5■■□□□ 1.67
P4HB-213ENST00000484286 KIF27Q86VH2 1401 aa25.49■■□□□ 1.67
P4HB-213ENST00000484286 ADRA2BP18089 450 aa25.44■■□□□ 1.66
P4HB-213ENST00000484286 TRIM41Q8WV44 630 aa25.44■■□□□ 1.66
P4HB-213ENST00000484286 FHAD1B1AJZ9 1412 aa25.44■■□□□ 1.66
P4HB-213ENST00000484286 PPP6R1Q9UPN7 881 aa25.42■■□□□ 1.66
P4HB-213ENST00000484286 ADAMTS12P58397 1594 aa25.42■■□□□ 1.66
P4HB-213ENST00000484286 GRIN2AQ12879 1464 aa25.38■■□□□ 1.65
P4HB-213ENST00000484286 IGF1RP08069 1367 aa25.31■■□□□ 1.64
P4HB-213ENST00000484286 CLASP1Q7Z460 1538 aa25.3■■□□□ 1.64
P4HB-213ENST00000484286 ARHGEF11O15085 1522 aa25.28■■□□□ 1.64
P4HB-213ENST00000484286 CUL7Q14999 1698 aa25.26■■□□□ 1.63
P4HB-213ENST00000484286 RIMBP3CA6NJZ7 1639 aa25.26■■□□□ 1.63
P4HB-213ENST00000484286 RIMBP3BA6NNM3 1639 aa25.26■■□□□ 1.63
P4HB-213ENST00000484286 RIMBP3Q9UFD9 1639 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms