RNA–Protein interactions for RNA: ENST00000484256.1

XBP1-206, Transcript of X-box binding protein 1, humanhuman

TSL 2

Gene XBP1, Length 2,173 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XBP1-206ENST00000484256 NISCHQ9Y2I1 1504 aa27.18■■□□□ 1.94
XBP1-206ENST00000484256 CCDC180Q9P1Z9 1646 aa23.69■■□□□ 1.38
XBP1-206ENST00000484256 ABCC9O60706 1549 aa22.88■■□□□ 1.25
XBP1-206ENST00000484256 DCAF8L2P0C7V8 631 aa22.77■■□□□ 1.24
XBP1-206ENST00000484256 ZCCHC6Q5VYS8 1495 aaKnown RBP22.77■■□□□ 1.24
XBP1-206ENST00000484256 DCAF1Q9Y4B6 1507 aa22.34■■□□□ 1.17
XBP1-206ENST00000484256 SHROOM4Q9ULL8 1493 aa22.25■■□□□ 1.15
XBP1-206ENST00000484256 NACADO15069 1562 aa22.16■■□□□ 1.14
XBP1-206ENST00000484256 MYO15BQ96JP2 1530 aa22.14■■□□□ 1.13
XBP1-206ENST00000484256 RB1CC1Q8TDY2 1594 aa22.07■■□□□ 1.12
XBP1-206ENST00000484256 SCRIBQ14160 1630 aa21.96■■□□□ 1.11
XBP1-206ENST00000484256 UNC13AQ9UPW8 1703 aa21.66■■□□□ 1.06
XBP1-206ENST00000484256 PABPN1Q86U42 306 aaKnown RBP eCLIP21.6■■□□□ 1.05
XBP1-206ENST00000484256 BICRAQ9NZM4 1560 aa21.46■■□□□ 1.03
XBP1-206ENST00000484256 SUPT5HO00267 1087 aaKnown RBP21.25■□□□□ 0.99
XBP1-206ENST00000484256 CECR2Q9BXF3 1484 aa21.25■□□□□ 0.99
XBP1-206ENST00000484256 MROH2BQ7Z745 1585 aa21.06■□□□□ 0.96
XBP1-206ENST00000484256 RSF1Q96T23 1441 aaPredicted RBP21.03■□□□□ 0.96
XBP1-206ENST00000484256 BAZ1AQ9NRL2 1556 aaPredicted RBP20.97■□□□□ 0.95
XBP1-206ENST00000484256 SMARCA4P51532 1647 aa20.94■□□□□ 0.94
XBP1-206ENST00000484256 WIZO95785 1651 aa20.87■□□□□ 0.93
XBP1-206ENST00000484256 EIF4G1Q04637 1599 aaKnown RBP20.84■□□□□ 0.93
XBP1-206ENST00000484256 ATAD2BQ9ULI0 1458 aa20.68■□□□□ 0.9
XBP1-206ENST00000484256 CC2D2AQ9P2K1 1620 aa20.62■□□□□ 0.89
XBP1-206ENST00000484256 PEG3Q9GZU2 1588 aa20.62■□□□□ 0.89
XBP1-206ENST00000484256 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
XBP1-206ENST00000484256 TOP2AP11388 1531 aaKnown RBP20.56■□□□□ 0.88
XBP1-206ENST00000484256 BAZ1BQ9UIG0 1483 aaKnown RBP20.56■□□□□ 0.88
XBP1-206ENST00000484256 NCAPD3P42695 1498 aa20.49■□□□□ 0.87
XBP1-206ENST00000484256 DNAJC5BQ9UF47 199 aa20.48■□□□□ 0.87
XBP1-206ENST00000484256 CCDC88BA6NC98 1476 aa20.42■□□□□ 0.86
XBP1-206ENST00000484256 HMGXB3Q12766 1538 aa20.41■□□□□ 0.86
XBP1-206ENST00000484256 CHIC1Q5VXU3 224 aa20.11■□□□□ 0.81
XBP1-206ENST00000484256 NESP48681 1621 aa20.02■□□□□ 0.8
XBP1-206ENST00000484256 CADPSQ9ULU8 1353 aa20■□□□□ 0.79
XBP1-206ENST00000484256 CFTRP13569 1480 aa20■□□□□ 0.79
XBP1-206ENST00000484256 ABCC8Q09428 1581 aa19.98■□□□□ 0.79
XBP1-206ENST00000484256 TRIM41Q8WV44 630 aa19.9■□□□□ 0.78
XBP1-206ENST00000484256 LAMC3Q9Y6N6 1575 aa19.82■□□□□ 0.76
XBP1-206ENST00000484256 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
XBP1-206ENST00000484256 WRNQ14191 1432 aaPredicted RBP eCLIP19.79■□□□□ 0.76
XBP1-206ENST00000484256 PRDM2Q13029 1718 aa19.78■□□□□ 0.76
XBP1-206ENST00000484256 SYNJ1O43426 1573 aa19.76■□□□□ 0.75
XBP1-206ENST00000484256 PDS5BQ9NTI5 1447 aa19.71■□□□□ 0.75
XBP1-206ENST00000484256 CUX1P39880 1505 aa19.69■□□□□ 0.74
XBP1-206ENST00000484256 KIF21AQ7Z4S6 1674 aa19.69■□□□□ 0.74
XBP1-206ENST00000484256 CEP164Q9UPV0 1460 aa19.68■□□□□ 0.74
XBP1-206ENST00000484256 FAM9AQ8IZU1 332 aaPredicted RBP19.67■□□□□ 0.74
XBP1-206ENST00000484256 TOP2BQ02880 1626 aa19.62■□□□□ 0.73
XBP1-206ENST00000484256 ERCC6Q03468 1493 aa19.59■□□□□ 0.73
XBP1-206ENST00000484256 URB2Q14146 1524 aaKnown RBP19.58■□□□□ 0.73
XBP1-206ENST00000484256 BIVM-ERCC5R4GMW8 1640 aa19.57■□□□□ 0.72
XBP1-206ENST00000484256 SOGA1O94964 1423 aa19.55■□□□□ 0.72
XBP1-206ENST00000484256 TOPBP1Q92547 1522 aa19.55■□□□□ 0.72
XBP1-206ENST00000484256 EHMT2Q96KQ7 1210 aa19.52■□□□□ 0.72
XBP1-206ENST00000484256 DNMBPQ6XZF7 1577 aa19.52■□□□□ 0.72
XBP1-206ENST00000484256 RUSC2Q8N2Y8 1516 aa19.52■□□□□ 0.71
XBP1-206ENST00000484256 FGD5Q6ZNL6 1462 aa19.51■□□□□ 0.71
XBP1-206ENST00000484256 MRC2Q9UBG0 1479 aa19.48■□□□□ 0.71
XBP1-206ENST00000484256 POLA1P09884 1462 aaPredicted RBP19.45■□□□□ 0.7
XBP1-206ENST00000484256 RAD54L2Q9Y4B4 1467 aa19.45■□□□□ 0.7
XBP1-206ENST00000484256 LOC105371045A0A1W2PR82 267 aa19.44■□□□□ 0.7
XBP1-206ENST00000484256 THOC2Q8NI27 1593 aaKnown RBP19.39■□□□□ 0.7
XBP1-206ENST00000484256 WDR62O43379 1518 aa19.37■□□□□ 0.69
XBP1-206ENST00000484256 CUX2O14529 1486 aa19.35■□□□□ 0.69
XBP1-206ENST00000484256 CSRNP3Q8WYN3 585 aa19.32■□□□□ 0.68
XBP1-206ENST00000484256 TDRD9Q8NDG6 1382 aaKnown RBP19.3■□□□□ 0.68
XBP1-206ENST00000484256 KIF27Q86VH2 1401 aa19.29■□□□□ 0.68
XBP1-206ENST00000484256 ABCA10Q8WWZ4 1543 aa19.27■□□□□ 0.68
XBP1-206ENST00000484256 EEA1Q15075 1411 aa19.25■□□□□ 0.67
XBP1-206ENST00000484256 TARBP1Q13395 1621 aaKnown RBP19.25■□□□□ 0.67
XBP1-206ENST00000484256 ZNF608Q9ULD9 1512 aaPredicted RBP19.22■□□□□ 0.67
XBP1-206ENST00000484256 WDR97A6NE52 1622 aa19.21■□□□□ 0.67
XBP1-206ENST00000484256 AQRO60306 1485 aaKnown RBP eCLIP19.21■□□□□ 0.676e-11■■■■■ 38.1
XBP1-206ENST00000484256 IFT140Q96RY7 1462 aa19.19■□□□□ 0.66
XBP1-206ENST00000484256 IGF1RP08069 1367 aa19.19■□□□□ 0.66
XBP1-206ENST00000484256 GAPVD1Q14C86 1478 aa19.15■□□□□ 0.66
XBP1-206ENST00000484256 RAPGEF2Q9Y4G8 1499 aa19.14■□□□□ 0.65
XBP1-206ENST00000484256 ABCA5Q8WWZ7 1642 aa19.14■□□□□ 0.65
XBP1-206ENST00000484256 UBTFP17480 764 aaKnown RBP19.12■□□□□ 0.65
XBP1-206ENST00000484256 PRXQ9BXM0 1461 aa19.09■□□□□ 0.65
XBP1-206ENST00000484256 CARMIL1Q5VZK9 1371 aa19.08■□□□□ 0.64
XBP1-206ENST00000484256 EIF4G3O43432 1585 aaKnown RBP19.08■□□□□ 0.64
XBP1-206ENST00000484256 GOLGA3Q08378 1498 aa19.07■□□□□ 0.64
XBP1-206ENST00000484256 KIF21BO75037 1637 aa19.06■□□□□ 0.64
XBP1-206ENST00000484256 RANGAP1P46060 587 aaPredicted RBP19.05■□□□□ 0.64
XBP1-206ENST00000484256 PBRM1Q86U86 1689 aa19.03■□□□□ 0.64
XBP1-206ENST00000484256 ERICH3Q5RHP9 1530 aa19.02■□□□□ 0.63
XBP1-206ENST00000484256 GRIN2BQ13224 1484 aa19.01■□□□□ 0.63
XBP1-206ENST00000484256 SNAPC4Q5SXM2 1469 aa18.98■□□□□ 0.63
XBP1-206ENST00000484256 CUL7Q14999 1698 aa18.96■□□□□ 0.62
XBP1-206ENST00000484256 TNIKQ9UKE5 1360 aa18.95■□□□□ 0.62
XBP1-206ENST00000484256 FBLN2P98095 1184 aa18.93■□□□□ 0.62
XBP1-206ENST00000484256 ADAMTS12P58397 1594 aa18.92■□□□□ 0.62
XBP1-206ENST00000484256 FHAD1B1AJZ9 1412 aa18.91■□□□□ 0.62
XBP1-206ENST00000484256 CEP162Q5TB80 1403 aa18.9■□□□□ 0.62
XBP1-206ENST00000484256 CHMP7Q8WUX9 453 aaPredicted RBP18.86■□□□□ 0.61
XBP1-206ENST00000484256 MAGI1Q96QZ7 1491 aaPredicted RBP18.85■□□□□ 0.61
XBP1-206ENST00000484256 SYNJ2O15056 1496 aa18.81■□□□□ 0.6
XBP1-206ENST00000484256 CLIP1P30622 1438 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms