RNA–Protein interactions for RNA: ENST00000484086.6

RFC5-206, Transcript of replication factor C subunit 5, humanhuman

TSL 4

Gene RFC5, Length 631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-206ENST00000484086 NISCHQ9Y2I1 1504 aa31.78■■■□□ 2.68
RFC5-206ENST00000484086 CCDC180Q9P1Z9 1646 aa28.51■■■□□ 2.15
RFC5-206ENST00000484086 ABCC9O60706 1549 aa28.35■■■□□ 2.13
RFC5-206ENST00000484086 RB1CC1Q8TDY2 1594 aa26.98■■□□□ 1.91
RFC5-206ENST00000484086 NACADO15069 1562 aa26.84■■□□□ 1.89
RFC5-206ENST00000484086 UNC13AQ9UPW8 1703 aa26.62■■□□□ 1.85
RFC5-206ENST00000484086 DNAJC5BQ9UF47 199 aa26.59■■□□□ 1.85
RFC5-206ENST00000484086 MYO15BQ96JP2 1530 aa26.53■■□□□ 1.84
RFC5-206ENST00000484086 ZCCHC6Q5VYS8 1495 aaKnown RBP26.51■■□□□ 1.83
RFC5-206ENST00000484086 DCAF8L2P0C7V8 631 aa26.48■■□□□ 1.83
RFC5-206ENST00000484086 BICRAQ9NZM4 1560 aa26.41■■□□□ 1.82
RFC5-206ENST00000484086 PABPN1Q86U42 306 aaKnown RBP eCLIP26.34■■□□□ 1.81
RFC5-206ENST00000484086 DCAF1Q9Y4B6 1507 aa26.24■■□□□ 1.79
RFC5-206ENST00000484086 SCRIBQ14160 1630 aa25.97■■□□□ 1.75
RFC5-206ENST00000484086 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
RFC5-206ENST00000484086 CC2D2AQ9P2K1 1620 aa25.66■■□□□ 1.7
RFC5-206ENST00000484086 EIF4G1Q04637 1599 aaKnown RBP25.63■■□□□ 1.69
RFC5-206ENST00000484086 CECR2Q9BXF3 1484 aa25.49■■□□□ 1.67
RFC5-206ENST00000484086 SMARCA4P51532 1647 aa24.8■■□□□ 1.56
RFC5-206ENST00000484086 NCAPD3P42695 1498 aa24.79■■□□□ 1.56
RFC5-206ENST00000484086 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
RFC5-206ENST00000484086 HMGXB3Q12766 1538 aa24.66■■□□□ 1.54
RFC5-206ENST00000484086 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
RFC5-206ENST00000484086 BAZ1AQ9NRL2 1556 aaPredicted RBP24.6■■□□□ 1.53
RFC5-206ENST00000484086 PEG3Q9GZU2 1588 aa24.58■■□□□ 1.52
RFC5-206ENST00000484086 MROH2BQ7Z745 1585 aa24.54■■□□□ 1.52
RFC5-206ENST00000484086 NESP48681 1621 aa24.46■■□□□ 1.51
RFC5-206ENST00000484086 BAZ1BQ9UIG0 1483 aaKnown RBP24.45■■□□□ 1.51
RFC5-206ENST00000484086 RSF1Q96T23 1441 aaPredicted RBP24.37■■□□□ 1.49
RFC5-206ENST00000484086 CUX2O14529 1486 aa24.34■■□□□ 1.49
RFC5-206ENST00000484086 ERCC6Q03468 1493 aa24.33■■□□□ 1.49
RFC5-206ENST00000484086 WIZO95785 1651 aa24.26■■□□□ 1.47
RFC5-206ENST00000484086 THOC2Q8NI27 1593 aaKnown RBP24.25■■□□□ 1.47
RFC5-206ENST00000484086 LAMC3Q9Y6N6 1575 aa24.21■■□□□ 1.47
RFC5-206ENST00000484086 SUPT5HO00267 1087 aaKnown RBP24.19■■□□□ 1.46
RFC5-206ENST00000484086 KIF21AQ7Z4S6 1674 aa24.18■■□□□ 1.46
RFC5-206ENST00000484086 DNAJC5Q9H3Z4 198 aa24.18■■□□□ 1.46
RFC5-206ENST00000484086 CADPSQ9ULU8 1353 aa23.99■■□□□ 1.43
RFC5-206ENST00000484086 TOP2AP11388 1531 aaKnown RBP23.95■■□□□ 1.43
RFC5-206ENST00000484086 PDS5BQ9NTI5 1447 aa23.95■■□□□ 1.42
RFC5-206ENST00000484086 WDR62O43379 1518 aa23.86■■□□□ 1.41
RFC5-206ENST00000484086 MRC2Q9UBG0 1479 aa23.85■■□□□ 1.41
RFC5-206ENST00000484086 CFTRP13569 1480 aa23.81■■□□□ 1.4
RFC5-206ENST00000484086 FANCD2Q9BXW9 1451 aa23.75■■□□□ 1.39
RFC5-206ENST00000484086 CEP164Q9UPV0 1460 aa23.74■■□□□ 1.39
RFC5-206ENST00000484086 PRDM2Q13029 1718 aa23.67■■□□□ 1.38
RFC5-206ENST00000484086 CCDC88BA6NC98 1476 aa23.66■■□□□ 1.38
RFC5-206ENST00000484086 URB2Q14146 1524 aaKnown RBP23.65■■□□□ 1.38
RFC5-206ENST00000484086 TOPBP1Q92547 1522 aa23.36■■□□□ 1.33
RFC5-206ENST00000484086 ZNF608Q9ULD9 1512 aaPredicted RBP23.33■■□□□ 1.33
RFC5-206ENST00000484086 DNMBPQ6XZF7 1577 aa23.28■■□□□ 1.32
RFC5-206ENST00000484086 IFT140Q96RY7 1462 aa23.25■■□□□ 1.31
RFC5-206ENST00000484086 TARBP1Q13395 1621 aaKnown RBP23.22■■□□□ 1.31
RFC5-206ENST00000484086 EIF4G3O43432 1585 aaKnown RBP23.22■■□□□ 1.31
RFC5-206ENST00000484086 ABCC8Q09428 1581 aa23.15■■□□□ 1.3
RFC5-206ENST00000484086 POLA1P09884 1462 aaPredicted RBP23.13■■□□□ 1.29
RFC5-206ENST00000484086 OSCARQ8IYS5 282 aa23.1■■□□□ 1.29
RFC5-206ENST00000484086 TRIM41Q8WV44 630 aa23.08■■□□□ 1.29
RFC5-206ENST00000484086 AQRO60306 1485 aaKnown RBP eCLIP23.06■■□□□ 1.281e-6■■■□□ 15.2
RFC5-206ENST00000484086 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
RFC5-206ENST00000484086 CHD1O14646 1710 aa23.05■■□□□ 1.28
RFC5-206ENST00000484086 CUX1P39880 1505 aa23.05■■□□□ 1.28
RFC5-206ENST00000484086 RIMBP3CA6NJZ7 1639 aa23.04■■□□□ 1.28
RFC5-206ENST00000484086 RIMBP3BA6NNM3 1639 aa23.04■■□□□ 1.28
RFC5-206ENST00000484086 RIMBP3Q9UFD9 1639 aa23.04■■□□□ 1.28
RFC5-206ENST00000484086 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
RFC5-206ENST00000484086 FGD5Q6ZNL6 1462 aa22.98■■□□□ 1.27
RFC5-206ENST00000484086 WDR97A6NE52 1622 aa22.97■■□□□ 1.27
RFC5-206ENST00000484086 WRNQ14191 1432 aaPredicted RBP eCLIP22.95■■□□□ 1.26
RFC5-206ENST00000484086 ARHGEF11O15085 1522 aa22.94■■□□□ 1.26
RFC5-206ENST00000484086 SOGA1O94964 1423 aa22.91■■□□□ 1.26
RFC5-206ENST00000484086 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.26
RFC5-206ENST00000484086 SNAPC4Q5SXM2 1469 aa22.85■■□□□ 1.25
RFC5-206ENST00000484086 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
RFC5-206ENST00000484086 TOP2BQ02880 1626 aa22.82■■□□□ 1.24
RFC5-206ENST00000484086 CLASP1Q7Z460 1538 aa22.79■■□□□ 1.24
RFC5-206ENST00000484086 PBRM1Q86U86 1689 aa22.79■■□□□ 1.24
RFC5-206ENST00000484086 BIVM-ERCC5R4GMW8 1640 aa22.79■■□□□ 1.24
RFC5-206ENST00000484086 ABCA5Q8WWZ7 1642 aa22.77■■□□□ 1.24
RFC5-206ENST00000484086 ARAP1Q96P48 1450 aa22.77■■□□□ 1.24
RFC5-206ENST00000484086 GRIN2BQ13224 1484 aa22.73■■□□□ 1.23
RFC5-206ENST00000484086 MAGI1Q96QZ7 1491 aaPredicted RBP22.73■■□□□ 1.23
RFC5-206ENST00000484086 ABCA10Q8WWZ4 1543 aa22.73■■□□□ 1.23
RFC5-206ENST00000484086 FBLN2P98095 1184 aa22.69■■□□□ 1.22
RFC5-206ENST00000484086 GAPVD1Q14C86 1478 aa22.67■■□□□ 1.22
RFC5-206ENST00000484086 SYNJ2O15056 1496 aa22.66■■□□□ 1.22
RFC5-206ENST00000484086 CYB5RLQ6IPT4 315 aa22.59■■□□□ 1.21
RFC5-206ENST00000484086 ADAMTS12P58397 1594 aa22.57■■□□□ 1.2
RFC5-206ENST00000484086 CHMP7Q8WUX9 453 aaPredicted RBP22.54■■□□□ 1.2
RFC5-206ENST00000484086 CEP170Q5SW79 1584 aa22.5■■□□□ 1.19
RFC5-206ENST00000484086 ERCC6L2Q5T890 1561 aa22.5■■□□□ 1.19
RFC5-206ENST00000484086 GRIN2AQ12879 1464 aa22.49■■□□□ 1.19
RFC5-206ENST00000484086 EEA1Q15075 1411 aa22.45■■□□□ 1.18
RFC5-206ENST00000484086 NUP160Q12769 1436 aa22.44■■□□□ 1.18
RFC5-206ENST00000484086 KIF27Q86VH2 1401 aa22.42■■□□□ 1.18
RFC5-206ENST00000484086 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
RFC5-206ENST00000484086 SHROOM2Q13796 1616 aa22.41■■□□□ 1.18
RFC5-206ENST00000484086 RUSC2Q8N2Y8 1516 aa22.38■■□□□ 1.17
RFC5-206ENST00000484086 FHAD1B1AJZ9 1412 aa22.37■■□□□ 1.17
RFC5-206ENST00000484086 FAM9AQ8IZU1 332 aaPredicted RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 245.6 ms