RNA–Protein interactions for RNA: ENST00000483977.5

MRPS6-204, Transcript of mitochondrial ribosomal protein S6, humanhuman

TSL 1 (best)

Gene MRPS6, Length 3,934 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS6-204ENST00000483977 NISCHQ9Y2I1 1504 aa10.84□□□□□ -0.67
MRPS6-204ENST00000483977 CCDC180Q9P1Z9 1646 aa9.68□□□□□ -0.86
MRPS6-204ENST00000483977 AEBP2Q6ZN18 517 aaPredicted RBP9.61□□□□□ -0.87
MRPS6-204ENST00000483977 ABCC9O60706 1549 aa9.51□□□□□ -0.89
MRPS6-204ENST00000483977 UNC13AQ9UPW8 1703 aa9.18□□□□□ -0.94
MRPS6-204ENST00000483977 CHIC1Q5VXU3 224 aa9.12□□□□□ -0.95
MRPS6-204ENST00000483977 RB1CC1Q8TDY2 1594 aa9.05□□□□□ -0.96
MRPS6-204ENST00000483977 ZCCHC6Q5VYS8 1495 aaKnown RBP9.04□□□□□ -0.96
MRPS6-204ENST00000483977 NACADO15069 1562 aa9.03□□□□□ -0.96
MRPS6-204ENST00000483977 BICRAQ9NZM4 1560 aa9.01□□□□□ -0.97
MRPS6-204ENST00000483977 MYO15BQ96JP2 1530 aa8.97□□□□□ -0.97
MRPS6-204ENST00000483977 DNAJC5BQ9UF47 199 aa8.93□□□□□ -0.98
MRPS6-204ENST00000483977 DCAF1Q9Y4B6 1507 aa8.92□□□□□ -0.98
MRPS6-204ENST00000483977 SCRIBQ14160 1630 aa8.86□□□□□ -0.99
MRPS6-204ENST00000483977 DCAF8L2P0C7V8 631 aa8.85□□□□□ -0.99
MRPS6-204ENST00000483977 PABPN1Q86U42 306 aaKnown RBP eCLIP8.84□□□□□ -0.99
MRPS6-204ENST00000483977 CC2D2AQ9P2K1 1620 aa8.67□□□□□ -1.02
MRPS6-204ENST00000483977 EIF4G1Q04637 1599 aaKnown RBP8.67□□□□□ -1.02
MRPS6-204ENST00000483977 SHROOM4Q9ULL8 1493 aa8.63□□□□□ -1.03
MRPS6-204ENST00000483977 CECR2Q9BXF3 1484 aa8.54□□□□□ -1.04
MRPS6-204ENST00000483977 SMARCA4P51532 1647 aa8.46□□□□□ -1.05
MRPS6-204ENST00000483977 MROH2BQ7Z745 1585 aa8.43□□□□□ -1.06
MRPS6-204ENST00000483977 PEG3Q9GZU2 1588 aa8.4□□□□□ -1.07
MRPS6-204ENST00000483977 ATAD2BQ9ULI0 1458 aa8.38□□□□□ -1.07
MRPS6-204ENST00000483977 WIZO95785 1651 aa8.37□□□□□ -1.07
MRPS6-204ENST00000483977 NCAPD3P42695 1498 aa8.35□□□□□ -1.07
MRPS6-204ENST00000483977 BAZ1AQ9NRL2 1556 aaPredicted RBP8.34□□□□□ -1.07
MRPS6-204ENST00000483977 HMGXB3Q12766 1538 aa8.33□□□□□ -1.08
MRPS6-204ENST00000483977 NESP48681 1621 aa8.31□□□□□ -1.08
MRPS6-204ENST00000483977 SMARCA2P51531 1590 aa8.28□□□□□ -1.08
MRPS6-204ENST00000483977 KIF21AQ7Z4S6 1674 aa8.26□□□□□ -1.09
MRPS6-204ENST00000483977 BAZ1BQ9UIG0 1483 aaKnown RBP8.24□□□□□ -1.09
MRPS6-204ENST00000483977 RSF1Q96T23 1441 aaPredicted RBP8.23□□□□□ -1.09
MRPS6-204ENST00000483977 THOC2Q8NI27 1593 aaKnown RBP8.23□□□□□ -1.09
MRPS6-204ENST00000483977 PHF23Q9BUL5 403 aaPredicted RBP8.17□□□□□ -1.1
MRPS6-204ENST00000483977 TOP2AP11388 1531 aaKnown RBP8.15□□□□□ -1.1
MRPS6-204ENST00000483977 LAMC3Q9Y6N6 1575 aa8.15□□□□□ -1.1
MRPS6-204ENST00000483977 PRDM2Q13029 1718 aa8.12□□□□□ -1.11
MRPS6-204ENST00000483977 CCDC88BA6NC98 1476 aa8.08□□□□□ -1.12
MRPS6-204ENST00000483977 CFTRP13569 1480 aa8.07□□□□□ -1.12
MRPS6-204ENST00000483977 ERCC6Q03468 1493 aa8.06□□□□□ -1.12
MRPS6-204ENST00000483977 WDR62O43379 1518 aa8.06□□□□□ -1.12
MRPS6-204ENST00000483977 CADPSQ9ULU8 1353 aa8.05□□□□□ -1.12
MRPS6-204ENST00000483977 CUX2O14529 1486 aa8.05□□□□□ -1.12
MRPS6-204ENST00000483977 URB2Q14146 1524 aaKnown RBP8.04□□□□□ -1.12
MRPS6-204ENST00000483977 FANCD2Q9BXW9 1451 aa8.01□□□□□ -1.13
MRPS6-204ENST00000483977 MRC2Q9UBG0 1479 aa7.98□□□□□ -1.13
MRPS6-204ENST00000483977 CEP164Q9UPV0 1460 aa7.96□□□□□ -1.13
MRPS6-204ENST00000483977 PDS5BQ9NTI5 1447 aa7.96□□□□□ -1.14
MRPS6-204ENST00000483977 SENP3Q9H4L4 574 aaPredicted RBP7.96□□□□□ -1.14
MRPS6-204ENST00000483977 TARBP1Q13395 1621 aaKnown RBP7.94□□□□□ -1.14
MRPS6-204ENST00000483977 ZNF608Q9ULD9 1512 aaPredicted RBP7.93□□□□□ -1.14
MRPS6-204ENST00000483977 TOPBP1Q92547 1522 aa7.91□□□□□ -1.14
MRPS6-204ENST00000483977 WDR97A6NE52 1622 aa7.91□□□□□ -1.14
MRPS6-204ENST00000483977 CUX1P39880 1505 aa7.9□□□□□ -1.15
MRPS6-204ENST00000483977 EIF4G3O43432 1585 aaKnown RBP7.89□□□□□ -1.15
MRPS6-204ENST00000483977 DNAJC5Q9H3Z4 198 aa7.89□□□□□ -1.15
MRPS6-204ENST00000483977 DNMBPQ6XZF7 1577 aa7.88□□□□□ -1.15
MRPS6-204ENST00000483977 POLA1P09884 1462 aaPredicted RBP7.86□□□□□ -1.15
MRPS6-204ENST00000483977 SYNJ1O43426 1573 aa7.84□□□□□ -1.15
MRPS6-204ENST00000483977 ABCC8Q09428 1581 aa7.84□□□□□ -1.15
MRPS6-204ENST00000483977 CHD1O14646 1710 aa7.84□□□□□ -1.15
MRPS6-204ENST00000483977 RAD54L2Q9Y4B4 1467 aa7.84□□□□□ -1.15
MRPS6-204ENST00000483977 BIVM-ERCC5R4GMW8 1640 aa7.81□□□□□ -1.16
MRPS6-204ENST00000483977 SUPT5HO00267 1087 aaKnown RBP7.81□□□□□ -1.16
MRPS6-204ENST00000483977 FGD5Q6ZNL6 1462 aa7.8□□□□□ -1.16
MRPS6-204ENST00000483977 AQRO60306 1485 aaKnown RBP eCLIP7.8□□□□□ -1.16
MRPS6-204ENST00000483977 PBRM1Q86U86 1689 aa7.8□□□□□ -1.16
MRPS6-204ENST00000483977 ABCA5Q8WWZ7 1642 aa7.79□□□□□ -1.16
MRPS6-204ENST00000483977 IFT140Q96RY7 1462 aa7.78□□□□□ -1.16
MRPS6-204ENST00000483977 TOP2BQ02880 1626 aa7.77□□□□□ -1.17
MRPS6-204ENST00000483977 RIMBP3CA6NJZ7 1639 aa7.75□□□□□ -1.17
MRPS6-204ENST00000483977 RIMBP3BA6NNM3 1639 aa7.75□□□□□ -1.17
MRPS6-204ENST00000483977 RIMBP3Q9UFD9 1639 aa7.75□□□□□ -1.17
MRPS6-204ENST00000483977 TDRD9Q8NDG6 1382 aaKnown RBP7.73□□□□□ -1.17
MRPS6-204ENST00000483977 CLASP1Q7Z460 1538 aa7.72□□□□□ -1.17
MRPS6-204ENST00000483977 ABCA10Q8WWZ4 1543 aa7.71□□□□□ -1.18
MRPS6-204ENST00000483977 SOGA1O94964 1423 aa7.71□□□□□ -1.18
MRPS6-204ENST00000483977 SNAPC4Q5SXM2 1469 aa7.71□□□□□ -1.18
MRPS6-204ENST00000483977 ERCC6L2Q5T890 1561 aa7.7□□□□□ -1.18
MRPS6-204ENST00000483977 CEP170Q5SW79 1584 aa7.68□□□□□ -1.18
MRPS6-204ENST00000483977 ARHGEF11O15085 1522 aa7.68□□□□□ -1.18
MRPS6-204ENST00000483977 ADAMTS12P58397 1594 aa7.68□□□□□ -1.18
MRPS6-204ENST00000483977 WRNQ14191 1432 aaPredicted RBP eCLIP7.66□□□□□ -1.18
MRPS6-204ENST00000483977 GAPVD1Q14C86 1478 aa7.65□□□□□ -1.19
MRPS6-204ENST00000483977 ARAP1Q96P48 1450 aa7.64□□□□□ -1.19
MRPS6-204ENST00000483977 SHROOM2Q13796 1616 aa7.63□□□□□ -1.19
MRPS6-204ENST00000483977 MAGI1Q96QZ7 1491 aaPredicted RBP7.63□□□□□ -1.19
MRPS6-204ENST00000483977 GRIN2BQ13224 1484 aa7.63□□□□□ -1.19
MRPS6-204ENST00000483977 RUSC2Q8N2Y8 1516 aa7.62□□□□□ -1.19
MRPS6-204ENST00000483977 SYNJ2O15056 1496 aa7.62□□□□□ -1.19
MRPS6-204ENST00000483977 OSCARQ8IYS5 282 aa7.6□□□□□ -1.19
MRPS6-204ENST00000483977 GRIN2AQ12879 1464 aa7.6□□□□□ -1.19
MRPS6-204ENST00000483977 ERICH3Q5RHP9 1530 aa7.59□□□□□ -1.19
MRPS6-204ENST00000483977 NUP160Q12769 1436 aa7.58□□□□□ -1.2
MRPS6-204ENST00000483977 FOXD1Q16676 465 aa7.56□□□□□ -1.2
MRPS6-204ENST00000483977 TRIM41Q8WV44 630 aa7.54□□□□□ -1.2
MRPS6-204ENST00000483977 IGF1RP08069 1367 aa7.53□□□□□ -1.2
MRPS6-204ENST00000483977 FBLN2P98095 1184 aa7.52□□□□□ -1.21
MRPS6-204ENST00000483977 CUL7Q14999 1698 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms