RNA–Protein interactions for RNA: ENST00000483827.1

ZC3HC1-210, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 5

Gene ZC3HC1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-210ENST00000483827 NISCHQ9Y2I1 1504 aa36.41■■■■□ 3.42
ZC3HC1-210ENST00000483827 CCDC180Q9P1Z9 1646 aa32.45■■■□□ 2.79
ZC3HC1-210ENST00000483827 ABCC9O60706 1549 aa32.06■■■□□ 2.72
ZC3HC1-210ENST00000483827 RB1CC1Q8TDY2 1594 aa30.67■■■□□ 2.5
ZC3HC1-210ENST00000483827 DCAF8L2P0C7V8 631 aa30.58■■■□□ 2.49
ZC3HC1-210ENST00000483827 NACADO15069 1562 aa30.56■■■□□ 2.48
ZC3HC1-210ENST00000483827 ZCCHC6Q5VYS8 1495 aaKnown RBP30.27■■■□□ 2.44
ZC3HC1-210ENST00000483827 MYO15BQ96JP2 1530 aa30.26■■■□□ 2.43
ZC3HC1-210ENST00000483827 UNC13AQ9UPW8 1703 aa30.06■■■□□ 2.4
ZC3HC1-210ENST00000483827 DCAF1Q9Y4B6 1507 aa30.06■■■□□ 2.4
ZC3HC1-210ENST00000483827 PABPN1Q86U42 306 aaKnown RBP eCLIP29.94■■■□□ 2.38
ZC3HC1-210ENST00000483827 BICRAQ9NZM4 1560 aa29.81■■■□□ 2.36
ZC3HC1-210ENST00000483827 AEBP2Q6ZN18 517 aaPredicted RBP29.69■■■□□ 2.34
ZC3HC1-210ENST00000483827 DNAJC5BQ9UF47 199 aa29.68■■■□□ 2.34
ZC3HC1-210ENST00000483827 SCRIBQ14160 1630 aa29.67■■■□□ 2.34
ZC3HC1-210ENST00000483827 SHROOM4Q9ULL8 1493 aa29.35■■■□□ 2.29
ZC3HC1-210ENST00000483827 EIF4G1Q04637 1599 aaKnown RBP29.02■■■□□ 2.24
ZC3HC1-210ENST00000483827 CC2D2AQ9P2K1 1620 aa28.98■■■□□ 2.23
ZC3HC1-210ENST00000483827 CECR2Q9BXF3 1484 aa28.8■■■□□ 2.2
ZC3HC1-210ENST00000483827 SMARCA4P51532 1647 aa28.32■■■□□ 2.12
ZC3HC1-210ENST00000483827 CHIC1Q5VXU3 224 aa28.31■■■□□ 2.12
ZC3HC1-210ENST00000483827 ATAD2BQ9ULI0 1458 aa28.21■■■□□ 2.11
ZC3HC1-210ENST00000483827 BAZ1AQ9NRL2 1556 aaPredicted RBP28.21■■■□□ 2.11
ZC3HC1-210ENST00000483827 NCAPD3P42695 1498 aa28.21■■■□□ 2.11
ZC3HC1-210ENST00000483827 SMARCA2P51531 1590 aa28.14■■■□□ 2.1
ZC3HC1-210ENST00000483827 MROH2BQ7Z745 1585 aa28.09■■■□□ 2.09
ZC3HC1-210ENST00000483827 HMGXB3Q12766 1538 aa28.05■■■□□ 2.08
ZC3HC1-210ENST00000483827 PEG3Q9GZU2 1588 aa28.01■■■□□ 2.07
ZC3HC1-210ENST00000483827 BAZ1BQ9UIG0 1483 aaKnown RBP27.97■■■□□ 2.07
ZC3HC1-210ENST00000483827 WIZO95785 1651 aa27.8■■■□□ 2.04
ZC3HC1-210ENST00000483827 NESP48681 1621 aa27.69■■■□□ 2.02
ZC3HC1-210ENST00000483827 RSF1Q96T23 1441 aaPredicted RBP27.67■■■□□ 2.02
ZC3HC1-210ENST00000483827 ERCC6Q03468 1493 aa27.62■■■□□ 2.01
ZC3HC1-210ENST00000483827 LAMC3Q9Y6N6 1575 aa27.51■■□□□ 1.99
ZC3HC1-210ENST00000483827 TOP2AP11388 1531 aaKnown RBP27.43■■□□□ 1.98
ZC3HC1-210ENST00000483827 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
ZC3HC1-210ENST00000483827 CUX2O14529 1486 aa27.38■■□□□ 1.97
ZC3HC1-210ENST00000483827 KIF21AQ7Z4S6 1674 aa27.36■■□□□ 1.97
ZC3HC1-210ENST00000483827 PDS5BQ9NTI5 1447 aa27.32■■□□□ 1.96
ZC3HC1-210ENST00000483827 THOC2Q8NI27 1593 aaKnown RBP27.29■■□□□ 1.96
ZC3HC1-210ENST00000483827 CFTRP13569 1480 aa27.17■■□□□ 1.94
ZC3HC1-210ENST00000483827 CCDC88BA6NC98 1476 aa27.13■■□□□ 1.93
ZC3HC1-210ENST00000483827 FANCD2Q9BXW9 1451 aa27.09■■□□□ 1.93
ZC3HC1-210ENST00000483827 MRC2Q9UBG0 1479 aa27.08■■□□□ 1.93
ZC3HC1-210ENST00000483827 CEP164Q9UPV0 1460 aa27.07■■□□□ 1.92
ZC3HC1-210ENST00000483827 WDR62O43379 1518 aa27■■□□□ 1.91
ZC3HC1-210ENST00000483827 PRDM2Q13029 1718 aa26.97■■□□□ 1.91
ZC3HC1-210ENST00000483827 URB2Q14146 1524 aaKnown RBP26.86■■□□□ 1.89
ZC3HC1-210ENST00000483827 DNAJC5Q9H3Z4 198 aa26.86■■□□□ 1.89
ZC3HC1-210ENST00000483827 SUPT5HO00267 1087 aaKnown RBP26.82■■□□□ 1.88
ZC3HC1-210ENST00000483827 TOPBP1Q92547 1522 aa26.63■■□□□ 1.85
ZC3HC1-210ENST00000483827 DNMBPQ6XZF7 1577 aa26.58■■□□□ 1.85
ZC3HC1-210ENST00000483827 ABCC8Q09428 1581 aa26.55■■□□□ 1.84
ZC3HC1-210ENST00000483827 IFT140Q96RY7 1462 aa26.49■■□□□ 1.83
ZC3HC1-210ENST00000483827 ZNF608Q9ULD9 1512 aaPredicted RBP26.46■■□□□ 1.83
ZC3HC1-210ENST00000483827 POLA1P09884 1462 aaPredicted RBP26.4■■□□□ 1.82
ZC3HC1-210ENST00000483827 TARBP1Q13395 1621 aaKnown RBP26.38■■□□□ 1.81
ZC3HC1-210ENST00000483827 CUX1P39880 1505 aa26.37■■□□□ 1.81
ZC3HC1-210ENST00000483827 EIF4G3O43432 1585 aaKnown RBP26.33■■□□□ 1.81
ZC3HC1-210ENST00000483827 RAD54L2Q9Y4B4 1467 aa26.32■■□□□ 1.8
ZC3HC1-210ENST00000483827 FGD5Q6ZNL6 1462 aa26.3■■□□□ 1.8
ZC3HC1-210ENST00000483827 AQRO60306 1485 aaKnown RBP eCLIP26.28■■□□□ 1.86e-6■□□□□ 8.5
ZC3HC1-210ENST00000483827 SOGA1O94964 1423 aa26.27■■□□□ 1.8
ZC3HC1-210ENST00000483827 OSCARQ8IYS5 282 aa26.22■■□□□ 1.79
ZC3HC1-210ENST00000483827 TDRD9Q8NDG6 1382 aaKnown RBP26.19■■□□□ 1.78
ZC3HC1-210ENST00000483827 WDR97A6NE52 1622 aa26.1■■□□□ 1.77
ZC3HC1-210ENST00000483827 WRNQ14191 1432 aaPredicted RBP eCLIP26.07■■□□□ 1.76
ZC3HC1-210ENST00000483827 CHD1O14646 1710 aa26.07■■□□□ 1.76
ZC3HC1-210ENST00000483827 SYNJ1O43426 1573 aa26.07■■□□□ 1.76
ZC3HC1-210ENST00000483827 TOP2BQ02880 1626 aa26.05■■□□□ 1.76
ZC3HC1-210ENST00000483827 BIVM-ERCC5R4GMW8 1640 aa26.05■■□□□ 1.76
ZC3HC1-210ENST00000483827 FBLN2P98095 1184 aa26.01■■□□□ 1.75
ZC3HC1-210ENST00000483827 SNAPC4Q5SXM2 1469 aa26.01■■□□□ 1.75
ZC3HC1-210ENST00000483827 ABCA10Q8WWZ4 1543 aa26.01■■□□□ 1.75
ZC3HC1-210ENST00000483827 GRIN2BQ13224 1484 aa25.98■■□□□ 1.75
ZC3HC1-210ENST00000483827 GAPVD1Q14C86 1478 aa25.97■■□□□ 1.75
ZC3HC1-210ENST00000483827 PBRM1Q86U86 1689 aa25.96■■□□□ 1.75
ZC3HC1-210ENST00000483827 ABCA5Q8WWZ7 1642 aa25.95■■□□□ 1.74
ZC3HC1-210ENST00000483827 TRIM41Q8WV44 630 aa25.93■■□□□ 1.74
ZC3HC1-210ENST00000483827 MAGI1Q96QZ7 1491 aaPredicted RBP25.92■■□□□ 1.74
ZC3HC1-210ENST00000483827 RIMBP3CA6NJZ7 1639 aa25.88■■□□□ 1.73
ZC3HC1-210ENST00000483827 RIMBP3BA6NNM3 1639 aa25.88■■□□□ 1.73
ZC3HC1-210ENST00000483827 RIMBP3Q9UFD9 1639 aa25.88■■□□□ 1.73
ZC3HC1-210ENST00000483827 CHMP7Q8WUX9 453 aaPredicted RBP25.86■■□□□ 1.73
ZC3HC1-210ENST00000483827 SYNJ2O15056 1496 aa25.84■■□□□ 1.73
ZC3HC1-210ENST00000483827 ARHGEF11O15085 1522 aa25.83■■□□□ 1.72
ZC3HC1-210ENST00000483827 CLASP1Q7Z460 1538 aa25.74■■□□□ 1.71
ZC3HC1-210ENST00000483827 ADAMTS12P58397 1594 aa25.72■■□□□ 1.71
ZC3HC1-210ENST00000483827 ERICH3Q5RHP9 1530 aa25.68■■□□□ 1.7
ZC3HC1-210ENST00000483827 GRIN2AQ12879 1464 aa25.66■■□□□ 1.7
ZC3HC1-210ENST00000483827 FHAD1B1AJZ9 1412 aa25.64■■□□□ 1.7
ZC3HC1-210ENST00000483827 ARAP1Q96P48 1450 aa25.61■■□□□ 1.69
ZC3HC1-210ENST00000483827 CYB5RLQ6IPT4 315 aa25.61■■□□□ 1.69
ZC3HC1-210ENST00000483827 CEP170Q5SW79 1584 aa25.57■■□□□ 1.68
ZC3HC1-210ENST00000483827 NUP160Q12769 1436 aa25.54■■□□□ 1.68
ZC3HC1-210ENST00000483827 KIF27Q86VH2 1401 aa25.53■■□□□ 1.68
ZC3HC1-210ENST00000483827 IGF1RP08069 1367 aa25.48■■□□□ 1.67
ZC3HC1-210ENST00000483827 ERCC6L2Q5T890 1561 aa25.43■■□□□ 1.66
ZC3HC1-210ENST00000483827 CUL7Q14999 1698 aa25.41■■□□□ 1.66
ZC3HC1-210ENST00000483827 SHROOM2Q13796 1616 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms