RNA–Protein interactions for RNA: ENST00000483583.1

PRDX1-206, Transcript of peroxiredoxin 1, humanhuman

TSL 2

Gene PRDX1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDX1-206ENST00000483583 NISCHQ9Y2I1 1504 aa55.41■■■■■ 6.46
PRDX1-206ENST00000483583 CCDC180Q9P1Z9 1646 aa49.52■■■■■ 5.52
PRDX1-206ENST00000483583 ABCC9O60706 1549 aa49.11■■■■■ 5.45
PRDX1-206ENST00000483583 RB1CC1Q8TDY2 1594 aa46.94■■■■■ 5.1
PRDX1-206ENST00000483583 DCAF8L2P0C7V8 631 aa46.71■■■■■ 5.07
PRDX1-206ENST00000483583 NACADO15069 1562 aa46.7■■■■■ 5.07
PRDX1-206ENST00000483583 MYO15BQ96JP2 1530 aa46.15■■■■■ 4.98
PRDX1-206ENST00000483583 ZCCHC6Q5VYS8 1495 aaKnown RBP46.01■■■■■ 4.96
PRDX1-206ENST00000483583 UNC13AQ9UPW8 1703 aa45.86■■■■■ 4.93
PRDX1-206ENST00000483583 PABPN1Q86U42 306 aaKnown RBP eCLIP45.82■■■■■ 4.93
PRDX1-206ENST00000483583 DCAF1Q9Y4B6 1507 aa45.76■■■■■ 4.92
PRDX1-206ENST00000483583 DNAJC5BQ9UF47 199 aa45.57■■■■■ 4.89
PRDX1-206ENST00000483583 BICRAQ9NZM4 1560 aa45.5■■■■■ 4.87
PRDX1-206ENST00000483583 SCRIBQ14160 1630 aa45.22■■■■■ 4.83
PRDX1-206ENST00000483583 SHROOM4Q9ULL8 1493 aa44.92■■■■■ 4.78
PRDX1-206ENST00000483583 EIF4G1Q04637 1599 aaKnown RBP44.38■■■■■ 4.69
PRDX1-206ENST00000483583 CC2D2AQ9P2K1 1620 aa44.36■■■■■ 4.69
PRDX1-206ENST00000483583 CECR2Q9BXF3 1484 aa44.17■■■■■ 4.66
PRDX1-206ENST00000483583 SMARCA4P51532 1647 aa43.15■■■■■ 4.5
PRDX1-206ENST00000483583 NCAPD3P42695 1498 aa43.08■■■■■ 4.49
PRDX1-206ENST00000483583 ATAD2BQ9ULI0 1458 aa43.04■■■■■ 4.48
PRDX1-206ENST00000483583 BAZ1AQ9NRL2 1556 aaPredicted RBP43■■■■■ 4.47
PRDX1-206ENST00000483583 SMARCA2P51531 1590 aa42.98■■■■■ 4.47
PRDX1-206ENST00000483583 HMGXB3Q12766 1538 aa42.82■■■■■ 4.45
PRDX1-206ENST00000483583 MROH2BQ7Z745 1585 aa42.72■■■■■ 4.43
PRDX1-206ENST00000483583 BAZ1BQ9UIG0 1483 aaKnown RBP42.7■■■■■ 4.43
PRDX1-206ENST00000483583 PEG3Q9GZU2 1588 aa42.66■■■■■ 4.42
PRDX1-206ENST00000483583 ERCC6Q03468 1493 aa42.41■■■■■ 4.38
PRDX1-206ENST00000483583 NESP48681 1621 aa42.31■■■■■ 4.36
PRDX1-206ENST00000483583 WIZO95785 1651 aa42.25■■■■■ 4.35
PRDX1-206ENST00000483583 CUX2O14529 1486 aa42.09■■■■■ 4.33
PRDX1-206ENST00000483583 LAMC3Q9Y6N6 1575 aa42.07■■■■■ 4.33
PRDX1-206ENST00000483583 RSF1Q96T23 1441 aaPredicted RBP42■■■■■ 4.31
PRDX1-206ENST00000483583 CADPSQ9ULU8 1353 aa41.83■■■■■ 4.29
PRDX1-206ENST00000483583 PDS5BQ9NTI5 1447 aa41.83■■■■■ 4.29
PRDX1-206ENST00000483583 KIF21AQ7Z4S6 1674 aa41.8■■■■■ 4.28
PRDX1-206ENST00000483583 THOC2Q8NI27 1593 aaKnown RBP41.75■■■■■ 4.27
PRDX1-206ENST00000483583 TOP2AP11388 1531 aaKnown RBP41.74■■■■■ 4.27
PRDX1-206ENST00000483583 DNAJC5Q9H3Z4 198 aa41.51■■■■■ 4.24
PRDX1-206ENST00000483583 CFTRP13569 1480 aa41.44■■■■■ 4.22
PRDX1-206ENST00000483583 MRC2Q9UBG0 1479 aa41.44■■■■■ 4.22
PRDX1-206ENST00000483583 CEP164Q9UPV0 1460 aa41.4■■■■■ 4.22
PRDX1-206ENST00000483583 FANCD2Q9BXW9 1451 aa41.38■■■■■ 4.21
PRDX1-206ENST00000483583 WDR62O43379 1518 aa41.29■■■■■ 4.2
PRDX1-206ENST00000483583 CCDC88BA6NC98 1476 aa41.26■■■■■ 4.2
PRDX1-206ENST00000483583 PRDM2Q13029 1718 aa41.1■■■■■ 4.17
PRDX1-206ENST00000483583 URB2Q14146 1524 aaKnown RBP40.98■■■■■ 4.15
PRDX1-206ENST00000483583 TOPBP1Q92547 1522 aa40.63■■■■■ 4.1
PRDX1-206ENST00000483583 SUPT5HO00267 1087 aaKnown RBP40.62■■■■■ 4.09
PRDX1-206ENST00000483583 ABCC8Q09428 1581 aa40.58■■■■■ 4.09
PRDX1-206ENST00000483583 DNMBPQ6XZF7 1577 aa40.53■■■■■ 4.08
PRDX1-206ENST00000483583 IFT140Q96RY7 1462 aa40.52■■■■■ 4.08
PRDX1-206ENST00000483583 ZNF608Q9ULD9 1512 aaPredicted RBP40.42■■■■■ 4.06
PRDX1-206ENST00000483583 OSCARQ8IYS5 282 aa40.29■■■■■ 4.04
PRDX1-206ENST00000483583 POLA1P09884 1462 aaPredicted RBP40.25■■■■■ 4.03
PRDX1-206ENST00000483583 EIF4G3O43432 1585 aaKnown RBP40.23■■■■■ 4.03
PRDX1-206ENST00000483583 TARBP1Q13395 1621 aaKnown RBP40.22■■■■■ 4.03
PRDX1-206ENST00000483583 AQRO60306 1485 aaKnown RBP eCLIP40.12■■■■■ 4.012e-7■■■■■ 33.8
PRDX1-206ENST00000483583 CUX1P39880 1505 aa40.11■■■■■ 4.01
PRDX1-206ENST00000483583 RAD54L2Q9Y4B4 1467 aa40.11■■■■■ 4.01
PRDX1-206ENST00000483583 SOGA1O94964 1423 aa40.1■■■■■ 4.01
PRDX1-206ENST00000483583 FGD5Q6ZNL6 1462 aa40.08■■■■■ 4.01
PRDX1-206ENST00000483583 TRIM41Q8WV44 630 aa40.01■■■■■ 4
PRDX1-206ENST00000483583 TDRD9Q8NDG6 1382 aaKnown RBP39.97■■■■□ 3.99
PRDX1-206ENST00000483583 CHD1O14646 1710 aa39.86■■■■□ 3.97
PRDX1-206ENST00000483583 FBLN2P98095 1184 aa39.85■■■■□ 3.97
PRDX1-206ENST00000483583 WDR97A6NE52 1622 aa39.84■■■■□ 3.97
PRDX1-206ENST00000483583 SNAPC4Q5SXM2 1469 aa39.74■■■■□ 3.95
PRDX1-206ENST00000483583 RIMBP3CA6NJZ7 1639 aa39.69■■■■□ 3.94
PRDX1-206ENST00000483583 RIMBP3BA6NNM3 1639 aa39.69■■■■□ 3.94
PRDX1-206ENST00000483583 RIMBP3Q9UFD9 1639 aa39.69■■■■□ 3.94
PRDX1-206ENST00000483583 GRIN2BQ13224 1484 aa39.68■■■■□ 3.94
PRDX1-206ENST00000483583 WRNQ14191 1432 aaPredicted RBP eCLIP39.65■■■■□ 3.94
PRDX1-206ENST00000483583 GAPVD1Q14C86 1478 aa39.62■■■■□ 3.93
PRDX1-206ENST00000483583 MAGI1Q96QZ7 1491 aaPredicted RBP39.62■■■■□ 3.93
PRDX1-206ENST00000483583 ABCA10Q8WWZ4 1543 aa39.62■■■■□ 3.93
PRDX1-206ENST00000483583 ARHGEF11O15085 1522 aa39.61■■■■□ 3.93
PRDX1-206ENST00000483583 TOP2BQ02880 1626 aa39.6■■■■□ 3.93
PRDX1-206ENST00000483583 BIVM-ERCC5R4GMW8 1640 aa39.59■■■■□ 3.93
PRDX1-206ENST00000483583 CHMP7Q8WUX9 453 aaPredicted RBP39.59■■■■□ 3.93
PRDX1-206ENST00000483583 PBRM1Q86U86 1689 aa39.59■■■■□ 3.93
PRDX1-206ENST00000483583 SYNJ1O43426 1573 aa39.58■■■■□ 3.93
PRDX1-206ENST00000483583 ABCA5Q8WWZ7 1642 aa39.53■■■■□ 3.92
PRDX1-206ENST00000483583 SYNJ2O15056 1496 aa39.49■■■■□ 3.91
PRDX1-206ENST00000483583 CLASP1Q7Z460 1538 aa39.35■■■■□ 3.89
PRDX1-206ENST00000483583 CYB5RLQ6IPT4 315 aa39.35■■■■□ 3.89
PRDX1-206ENST00000483583 ARAP1Q96P48 1450 aa39.24■■■■□ 3.87
PRDX1-206ENST00000483583 ADAMTS12P58397 1594 aa39.21■■■■□ 3.87
PRDX1-206ENST00000483583 GRIN2AQ12879 1464 aa39.17■■■■□ 3.86
PRDX1-206ENST00000483583 ERICH3Q5RHP9 1530 aa39.14■■■■□ 3.86
PRDX1-206ENST00000483583 FHAD1B1AJZ9 1412 aa39.13■■■■□ 3.85
PRDX1-206ENST00000483583 CEP170Q5SW79 1584 aa39■■■■□ 3.83
PRDX1-206ENST00000483583 NUP160Q12769 1436 aa38.99■■■■□ 3.83
PRDX1-206ENST00000483583 KIF27Q86VH2 1401 aa38.87■■■■□ 3.81
PRDX1-206ENST00000483583 ERCC6L2Q5T890 1561 aa38.8■■■■□ 3.8
PRDX1-206ENST00000483583 TRHP20396 242 aaPredicted RBP38.8■■■■□ 3.8
PRDX1-206ENST00000483583 SHROOM2Q13796 1616 aa38.76■■■■□ 3.8
PRDX1-206ENST00000483583 IGF1RP08069 1367 aa38.75■■■■□ 3.79
PRDX1-206ENST00000483583 CUL7Q14999 1698 aa38.7■■■■□ 3.79
PRDX1-206ENST00000483583 RUSC2Q8N2Y8 1516 aa38.64■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms