RNA–Protein interactions for RNA: ENST00000483451.5

PDCD10-212, Transcript of programmed cell death 10, humanhuman

TSL 5

Gene PDCD10, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-212ENST00000483451 NISCHQ9Y2I1 1504 aa49.63■■■■■ 5.54
PDCD10-212ENST00000483451 CCDC180Q9P1Z9 1646 aa44.35■■■■■ 4.69
PDCD10-212ENST00000483451 ABCC9O60706 1549 aa43.55■■■■■ 4.56
PDCD10-212ENST00000483451 RB1CC1Q8TDY2 1594 aa41.84■■■■■ 4.29
PDCD10-212ENST00000483451 NACADO15069 1562 aa41.71■■■■■ 4.27
PDCD10-212ENST00000483451 MYO15BQ96JP2 1530 aa41.39■■■■■ 4.22
PDCD10-212ENST00000483451 DCAF8L2P0C7V8 631 aa41.39■■■■■ 4.22
PDCD10-212ENST00000483451 ZCCHC6Q5VYS8 1495 aaKnown RBP41.3■■■■■ 4.2
PDCD10-212ENST00000483451 DCAF1Q9Y4B6 1507 aa41.1■■■■■ 4.17
PDCD10-212ENST00000483451 UNC13AQ9UPW8 1703 aa40.96■■■■■ 4.15
PDCD10-212ENST00000483451 DNAJC5BQ9UF47 199 aa40.66■■■■■ 4.1
PDCD10-212ENST00000483451 BICRAQ9NZM4 1560 aa40.6■■■■■ 4.09
PDCD10-212ENST00000483451 PABPN1Q86U42 306 aaKnown RBP eCLIP40.57■■■■■ 4.09
PDCD10-212ENST00000483451 SCRIBQ14160 1630 aa40.36■■■■■ 4.05
PDCD10-212ENST00000483451 SHROOM4Q9ULL8 1493 aa40.18■■■■■ 4.02
PDCD10-212ENST00000483451 EIF4G1Q04637 1599 aaKnown RBP39.54■■■■□ 3.92
PDCD10-212ENST00000483451 CC2D2AQ9P2K1 1620 aa39.44■■■■□ 3.9
PDCD10-212ENST00000483451 CECR2Q9BXF3 1484 aa39.18■■■■□ 3.86
PDCD10-212ENST00000483451 SMARCA4P51532 1647 aa38.61■■■■□ 3.77
PDCD10-212ENST00000483451 BAZ1AQ9NRL2 1556 aaPredicted RBP38.5■■■■□ 3.75
PDCD10-212ENST00000483451 NCAPD3P42695 1498 aa38.47■■■■□ 3.75
PDCD10-212ENST00000483451 ATAD2BQ9ULI0 1458 aa38.43■■■■□ 3.74
PDCD10-212ENST00000483451 SMARCA2P51531 1590 aa38.4■■■■□ 3.74
PDCD10-212ENST00000483451 HMGXB3Q12766 1538 aa38.3■■■■□ 3.72
PDCD10-212ENST00000483451 PEG3Q9GZU2 1588 aa38.27■■■■□ 3.72
PDCD10-212ENST00000483451 MROH2BQ7Z745 1585 aa38.23■■■■□ 3.71
PDCD10-212ENST00000483451 BAZ1BQ9UIG0 1483 aaKnown RBP38.09■■■■□ 3.69
PDCD10-212ENST00000483451 WIZO95785 1651 aa37.82■■■■□ 3.65
PDCD10-212ENST00000483451 RSF1Q96T23 1441 aaPredicted RBP37.66■■■■□ 3.62
PDCD10-212ENST00000483451 NESP48681 1621 aa37.61■■■■□ 3.61
PDCD10-212ENST00000483451 ERCC6Q03468 1493 aa37.57■■■■□ 3.6
PDCD10-212ENST00000483451 LAMC3Q9Y6N6 1575 aa37.54■■■■□ 3.6
PDCD10-212ENST00000483451 DNAJC5Q9H3Z4 198 aa37.52■■■■□ 3.6
PDCD10-212ENST00000483451 TOP2AP11388 1531 aaKnown RBP37.42■■■■□ 3.58
PDCD10-212ENST00000483451 CUX2O14529 1486 aa37.35■■■■□ 3.57
PDCD10-212ENST00000483451 CADPSQ9ULU8 1353 aa37.29■■■■□ 3.56
PDCD10-212ENST00000483451 KIF21AQ7Z4S6 1674 aa37.24■■■■□ 3.55
PDCD10-212ENST00000483451 PDS5BQ9NTI5 1447 aa37.23■■■■□ 3.55
PDCD10-212ENST00000483451 THOC2Q8NI27 1593 aaKnown RBP37.2■■■■□ 3.55
PDCD10-212ENST00000483451 CFTRP13569 1480 aa37.04■■■■□ 3.52
PDCD10-212ENST00000483451 CCDC88BA6NC98 1476 aa36.93■■■■□ 3.5
PDCD10-212ENST00000483451 MRC2Q9UBG0 1479 aa36.9■■■■□ 3.5
PDCD10-212ENST00000483451 FANCD2Q9BXW9 1451 aa36.88■■■■□ 3.5
PDCD10-212ENST00000483451 CEP164Q9UPV0 1460 aa36.88■■■■□ 3.49
PDCD10-212ENST00000483451 PRDM2Q13029 1718 aa36.86■■■■□ 3.49
PDCD10-212ENST00000483451 WDR62O43379 1518 aa36.83■■■■□ 3.49
PDCD10-212ENST00000483451 URB2Q14146 1524 aaKnown RBP36.55■■■■□ 3.44
PDCD10-212ENST00000483451 SUPT5HO00267 1087 aaKnown RBP36.34■■■■□ 3.41
PDCD10-212ENST00000483451 TOPBP1Q92547 1522 aa36.28■■■■□ 3.4
PDCD10-212ENST00000483451 ABCC8Q09428 1581 aa36.26■■■■□ 3.39
PDCD10-212ENST00000483451 DNMBPQ6XZF7 1577 aa36.23■■■■□ 3.39
PDCD10-212ENST00000483451 IFT140Q96RY7 1462 aa36.11■■■■□ 3.37
PDCD10-212ENST00000483451 ZNF608Q9ULD9 1512 aaPredicted RBP35.97■■■■□ 3.35
PDCD10-212ENST00000483451 TRIM41Q8WV44 630 aa35.96■■■■□ 3.35
PDCD10-212ENST00000483451 TARBP1Q13395 1621 aaKnown RBP35.95■■■■□ 3.35
PDCD10-212ENST00000483451 POLA1P09884 1462 aaPredicted RBP35.94■■■■□ 3.34
PDCD10-212ENST00000483451 CUX1P39880 1505 aa35.9■■■■□ 3.34
PDCD10-212ENST00000483451 EIF4G3O43432 1585 aaKnown RBP35.88■■■■□ 3.33
PDCD10-212ENST00000483451 FGD5Q6ZNL6 1462 aa35.8■■■■□ 3.32
PDCD10-212ENST00000483451 OSCARQ8IYS5 282 aa35.76■■■■□ 3.32
PDCD10-212ENST00000483451 RAD54L2Q9Y4B4 1467 aa35.75■■■■□ 3.31
PDCD10-212ENST00000483451 SOGA1O94964 1423 aa35.74■■■■□ 3.31
PDCD10-212ENST00000483451 AQRO60306 1485 aaKnown RBP eCLIP35.7■■■■□ 3.31
PDCD10-212ENST00000483451 WDR97A6NE52 1622 aa35.68■■■■□ 3.3
PDCD10-212ENST00000483451 BIVM-ERCC5R4GMW8 1640 aa35.56■■■■□ 3.28
PDCD10-212ENST00000483451 TDRD9Q8NDG6 1382 aaKnown RBP35.55■■■■□ 3.28
PDCD10-212ENST00000483451 TOP2BQ02880 1626 aa35.54■■■■□ 3.28
PDCD10-212ENST00000483451 WRNQ14191 1432 aaPredicted RBP eCLIP35.51■■■■□ 3.28
PDCD10-212ENST00000483451 CHD1O14646 1710 aa35.5■■■■□ 3.27
PDCD10-212ENST00000483451 SYNJ1O43426 1573 aa35.5■■■■□ 3.27
PDCD10-212ENST00000483451 ABCA10Q8WWZ4 1543 aa35.47■■■■□ 3.27
PDCD10-212ENST00000483451 GRIN2BQ13224 1484 aa35.4■■■■□ 3.26
PDCD10-212ENST00000483451 SNAPC4Q5SXM2 1469 aa35.4■■■■□ 3.26
PDCD10-212ENST00000483451 ABCA5Q8WWZ7 1642 aa35.39■■■■□ 3.26
PDCD10-212ENST00000483451 PBRM1Q86U86 1689 aa35.39■■■■□ 3.26
PDCD10-212ENST00000483451 MAGI1Q96QZ7 1491 aaPredicted RBP35.36■■■■□ 3.25
PDCD10-212ENST00000483451 GAPVD1Q14C86 1478 aa35.35■■■■□ 3.25
PDCD10-212ENST00000483451 FBLN2P98095 1184 aa35.24■■■■□ 3.23
PDCD10-212ENST00000483451 SYNJ2O15056 1496 aa35.22■■■■□ 3.23
PDCD10-212ENST00000483451 RIMBP3CA6NJZ7 1639 aa35.21■■■■□ 3.23
PDCD10-212ENST00000483451 RIMBP3BA6NNM3 1639 aa35.21■■■■□ 3.23
PDCD10-212ENST00000483451 RIMBP3Q9UFD9 1639 aa35.21■■■■□ 3.23
PDCD10-212ENST00000483451 ARHGEF11O15085 1522 aa35.15■■■■□ 3.22
PDCD10-212ENST00000483451 CHMP7Q8WUX9 453 aaPredicted RBP35.13■■■■□ 3.21
PDCD10-212ENST00000483451 CLASP1Q7Z460 1538 aa35.1■■■■□ 3.21
PDCD10-212ENST00000483451 ADAMTS12P58397 1594 aa35.08■■■■□ 3.21
PDCD10-212ENST00000483451 ERICH3Q5RHP9 1530 aa35.05■■■■□ 3.2
PDCD10-212ENST00000483451 GRIN2AQ12879 1464 aa34.96■■■■□ 3.19
PDCD10-212ENST00000483451 CYB5RLQ6IPT4 315 aa34.94■■■■□ 3.18
PDCD10-212ENST00000483451 FHAD1B1AJZ9 1412 aa34.94■■■■□ 3.18
PDCD10-212ENST00000483451 ARAP1Q96P48 1450 aa34.84■■■■□ 3.17
PDCD10-212ENST00000483451 NUP160Q12769 1436 aa34.82■■■■□ 3.17
PDCD10-212ENST00000483451 CEP170Q5SW79 1584 aa34.82■■■■□ 3.16
PDCD10-212ENST00000483451 KIF27Q86VH2 1401 aa34.79■■■■□ 3.16
PDCD10-212ENST00000483451 CUL7Q14999 1698 aa34.7■■■■□ 3.15
PDCD10-212ENST00000483451 TRHP20396 242 aaPredicted RBP34.7■■■■□ 3.15
PDCD10-212ENST00000483451 IGF1RP08069 1367 aa34.67■■■■□ 3.14
PDCD10-212ENST00000483451 SHROOM2Q13796 1616 aa34.66■■■■□ 3.14
PDCD10-212ENST00000483451 RUSC2Q8N2Y8 1516 aa34.57■■■■□ 3.12
PDCD10-212ENST00000483451 ERCC6L2Q5T890 1561 aa34.55■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms