RNA–Protein interactions for RNA: ENST00000482250.1

USP34-213, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 515 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-213ENST00000482250 NISCHQ9Y2I1 1504 aa28.61■■■□□ 2.17
USP34-213ENST00000482250 AEBP2Q6ZN18 517 aaPredicted RBP27.78■■■□□ 2.04
USP34-213ENST00000482250 CHIC1Q5VXU3 224 aa26.45■■□□□ 1.82
USP34-213ENST00000482250 CCDC180Q9P1Z9 1646 aa25.7■■□□□ 1.7
USP34-213ENST00000482250 ABCC9O60706 1549 aa25.55■■□□□ 1.68
USP34-213ENST00000482250 RB1CC1Q8TDY2 1594 aa24.35■■□□□ 1.49
USP34-213ENST00000482250 NACADO15069 1562 aa24.19■■□□□ 1.46
USP34-213ENST00000482250 DCAF8L2P0C7V8 631 aa24.03■■□□□ 1.44
USP34-213ENST00000482250 UNC13AQ9UPW8 1703 aa24.01■■□□□ 1.43
USP34-213ENST00000482250 DNAJC5BQ9UF47 199 aa23.87■■□□□ 1.41
USP34-213ENST00000482250 MYO15BQ96JP2 1530 aa23.85■■□□□ 1.41
USP34-213ENST00000482250 PABPN1Q86U42 306 aaKnown RBP eCLIP23.76■■□□□ 1.39
USP34-213ENST00000482250 ZCCHC6Q5VYS8 1495 aaKnown RBP23.75■■□□□ 1.39
USP34-213ENST00000482250 BICRAQ9NZM4 1560 aa23.71■■□□□ 1.39
USP34-213ENST00000482250 SENP3Q9H4L4 574 aaPredicted RBP23.63■■□□□ 1.37
USP34-213ENST00000482250 DCAF1Q9Y4B6 1507 aa23.61■■□□□ 1.37
USP34-213ENST00000482250 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
USP34-213ENST00000482250 PHF23Q9BUL5 403 aaPredicted RBP23.33■■□□□ 1.33
USP34-213ENST00000482250 SHROOM4Q9ULL8 1493 aa23.27■■□□□ 1.32
USP34-213ENST00000482250 CC2D2AQ9P2K1 1620 aa23.13■■□□□ 1.29
USP34-213ENST00000482250 EIF4G1Q04637 1599 aaKnown RBP23.08■■□□□ 1.29
USP34-213ENST00000482250 CECR2Q9BXF3 1484 aa22.98■■□□□ 1.27
USP34-213ENST00000482250 SMARCA4P51532 1647 aa22.35■■□□□ 1.17
USP34-213ENST00000482250 NCAPD3P42695 1498 aa22.3■■□□□ 1.16
USP34-213ENST00000482250 ATAD2BQ9ULI0 1458 aa22.28■■□□□ 1.16
USP34-213ENST00000482250 SMARCA2P51531 1590 aa22.21■■□□□ 1.15
USP34-213ENST00000482250 HMGXB3Q12766 1538 aa22.2■■□□□ 1.14
USP34-213ENST00000482250 BAZ1AQ9NRL2 1556 aaPredicted RBP22.19■■□□□ 1.14
USP34-213ENST00000482250 PEG3Q9GZU2 1588 aa22.1■■□□□ 1.13
USP34-213ENST00000482250 MROH2BQ7Z745 1585 aa22.08■■□□□ 1.12
USP34-213ENST00000482250 BAZ1BQ9UIG0 1483 aaKnown RBP22.07■■□□□ 1.12
USP34-213ENST00000482250 FOXD1Q16676 465 aa22.04■■□□□ 1.12
USP34-213ENST00000482250 NESP48681 1621 aa22.02■■□□□ 1.11
USP34-213ENST00000482250 ERCC6Q03468 1493 aa22.01■■□□□ 1.11
USP34-213ENST00000482250 CUX2O14529 1486 aa21.93■■□□□ 1.1
USP34-213ENST00000482250 WIZO95785 1651 aa21.88■■□□□ 1.09
USP34-213ENST00000482250 LAMC3Q9Y6N6 1575 aa21.83■■□□□ 1.09
USP34-213ENST00000482250 KIF21AQ7Z4S6 1674 aa21.82■■□□□ 1.08
USP34-213ENST00000482250 THOC2Q8NI27 1593 aaKnown RBP21.81■■□□□ 1.08
USP34-213ENST00000482250 DNAJC5Q9H3Z4 198 aa21.76■■□□□ 1.07
USP34-213ENST00000482250 PDS5BQ9NTI5 1447 aa21.63■■□□□ 1.05
USP34-213ENST00000482250 RSF1Q96T23 1441 aaPredicted RBP21.61■■□□□ 1.05
USP34-213ENST00000482250 CADPSQ9ULU8 1353 aa21.61■■□□□ 1.05
USP34-213ENST00000482250 TOP2AP11388 1531 aaKnown RBP21.54■■□□□ 1.04
USP34-213ENST00000482250 MRC2Q9UBG0 1479 aa21.49■■□□□ 1.03
USP34-213ENST00000482250 WDR62O43379 1518 aa21.47■■□□□ 1.03
USP34-213ENST00000482250 CEP164Q9UPV0 1460 aa21.43■■□□□ 1.02
USP34-213ENST00000482250 CFTRP13569 1480 aa21.42■■□□□ 1.02
USP34-213ENST00000482250 FANCD2Q9BXW9 1451 aa21.41■■□□□ 1.02
USP34-213ENST00000482250 PRDM2Q13029 1718 aa21.4■■□□□ 1.02
USP34-213ENST00000482250 CCDC88BA6NC98 1476 aa21.27■■□□□ 1
USP34-213ENST00000482250 URB2Q14146 1524 aaKnown RBP21.27■■□□□ 1
USP34-213ENST00000482250 PLPPR3Q6T4P5 718 aa21.12■□□□□ 0.97
USP34-213ENST00000482250 TOPBP1Q92547 1522 aa21.04■□□□□ 0.96
USP34-213ENST00000482250 ZNF608Q9ULD9 1512 aaPredicted RBP20.99■□□□□ 0.95
USP34-213ENST00000482250 DNMBPQ6XZF7 1577 aa20.98■□□□□ 0.95
USP34-213ENST00000482250 IFT140Q96RY7 1462 aa20.97■□□□□ 0.95
USP34-213ENST00000482250 EIF4G3O43432 1585 aaKnown RBP20.93■□□□□ 0.94
USP34-213ENST00000482250 ABCC8Q09428 1581 aa20.92■□□□□ 0.94
USP34-213ENST00000482250 TARBP1Q13395 1621 aaKnown RBP20.9■□□□□ 0.94
USP34-213ENST00000482250 TRIM41Q8WV44 630 aa20.89■□□□□ 0.93
USP34-213ENST00000482250 OSCARQ8IYS5 282 aa20.88■□□□□ 0.93
USP34-213ENST00000482250 POLA1P09884 1462 aaPredicted RBP20.83■□□□□ 0.93
USP34-213ENST00000482250 CHD1O14646 1710 aa20.81■□□□□ 0.92
USP34-213ENST00000482250 AQRO60306 1485 aaKnown RBP eCLIP20.78■□□□□ 0.92
USP34-213ENST00000482250 RIMBP3CA6NJZ7 1639 aa20.77■□□□□ 0.92
USP34-213ENST00000482250 RIMBP3BA6NNM3 1639 aa20.77■□□□□ 0.92
USP34-213ENST00000482250 RIMBP3Q9UFD9 1639 aa20.77■□□□□ 0.92
USP34-213ENST00000482250 RAD54L2Q9Y4B4 1467 aa20.76■□□□□ 0.91
USP34-213ENST00000482250 CUX1P39880 1505 aa20.74■□□□□ 0.91
USP34-213ENST00000482250 FGD5Q6ZNL6 1462 aa20.72■□□□□ 0.91
USP34-213ENST00000482250 SUPT5HO00267 1087 aaKnown RBP20.69■□□□□ 0.9
USP34-213ENST00000482250 SOGA1O94964 1423 aa20.68■□□□□ 0.9
USP34-213ENST00000482250 WDR97A6NE52 1622 aa20.67■□□□□ 0.9
USP34-213ENST00000482250 PPP6R1Q9UPN7 881 aa20.67■□□□□ 0.9
USP34-213ENST00000482250 ARHGEF11O15085 1522 aa20.66■□□□□ 0.9
USP34-213ENST00000482250 TDRD9Q8NDG6 1382 aaKnown RBP20.64■□□□□ 0.89
USP34-213ENST00000482250 PBRM1Q86U86 1689 aa20.59■□□□□ 0.89
USP34-213ENST00000482250 SNAPC4Q5SXM2 1469 aa20.59■□□□□ 0.89
USP34-213ENST00000482250 MSH5O43196 834 aa20.57■□□□□ 0.88
USP34-213ENST00000482250 FBLN2P98095 1184 aa20.57■□□□□ 0.88
USP34-213ENST00000482250 ADRA2BP18089 450 aa20.56■□□□□ 0.88
USP34-213ENST00000482250 PIAS4Q8N2W9 510 aaPredicted RBP20.54■□□□□ 0.88
USP34-213ENST00000482250 GRIN2BQ13224 1484 aa20.5■□□□□ 0.87
USP34-213ENST00000482250 MAGI1Q96QZ7 1491 aaPredicted RBP20.5■□□□□ 0.87
USP34-213ENST00000482250 ABCA5Q8WWZ7 1642 aa20.5■□□□□ 0.87
USP34-213ENST00000482250 CLASP1Q7Z460 1538 aa20.49■□□□□ 0.87
USP34-213ENST00000482250 BIVM-ERCC5R4GMW8 1640 aa20.47■□□□□ 0.87
USP34-213ENST00000482250 ARAP1Q96P48 1450 aa20.47■□□□□ 0.87
USP34-213ENST00000482250 ABCA10Q8WWZ4 1543 aa20.47■□□□□ 0.87
USP34-213ENST00000482250 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
USP34-213ENST00000482250 GAPVD1Q14C86 1478 aa20.45■□□□□ 0.86
USP34-213ENST00000482250 TOP2BQ02880 1626 aa20.44■□□□□ 0.86
USP34-213ENST00000482250 SYNJ2O15056 1496 aa20.43■□□□□ 0.86
USP34-213ENST00000482250 CYB5RLQ6IPT4 315 aa20.42■□□□□ 0.86
USP34-213ENST00000482250 CHMP7Q8WUX9 453 aaPredicted RBP20.41■□□□□ 0.86
USP34-213ENST00000482250 WRNQ14191 1432 aaPredicted RBP eCLIP20.36■□□□□ 0.85
USP34-213ENST00000482250 ADAMTS12P58397 1594 aa20.33■□□□□ 0.84
USP34-213ENST00000482250 GRIN2AQ12879 1464 aa20.27■□□□□ 0.84
USP34-213ENST00000482250 CEP170Q5SW79 1584 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms