RNA–Protein interactions for RNA: ENST00000481997.5

ARPC1B-217, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 2

Gene ARPC1B, Length 945 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-217ENST00000481997 NISCHQ9Y2I1 1504 aa34.65■■■■□ 3.14
ARPC1B-217ENST00000481997 ABCC9O60706 1549 aa30.68■■■□□ 2.5
ARPC1B-217ENST00000481997 CCDC180Q9P1Z9 1646 aa30.47■■■□□ 2.47
ARPC1B-217ENST00000481997 DNAJC5BQ9UF47 199 aa29.89■■■□□ 2.38
ARPC1B-217ENST00000481997 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
ARPC1B-217ENST00000481997 DCAF1Q9Y4B6 1507 aa28.71■■■□□ 2.19
ARPC1B-217ENST00000481997 DCAF8L2P0C7V8 631 aa28.62■■■□□ 2.17
ARPC1B-217ENST00000481997 RB1CC1Q8TDY2 1594 aa28.62■■■□□ 2.17
ARPC1B-217ENST00000481997 MYO15BQ96JP2 1530 aa28.52■■■□□ 2.16
ARPC1B-217ENST00000481997 DNAJC5Q9H3Z4 198 aa28.47■■■□□ 2.15
ARPC1B-217ENST00000481997 NACADO15069 1562 aa28.43■■■□□ 2.14
ARPC1B-217ENST00000481997 PABPN1Q86U42 306 aaKnown RBP eCLIP28.41■■■□□ 2.14
ARPC1B-217ENST00000481997 SHROOM4Q9ULL8 1493 aa27.91■■■□□ 2.06
ARPC1B-217ENST00000481997 SCRIBQ14160 1630 aa27.88■■■□□ 2.05
ARPC1B-217ENST00000481997 UNC13AQ9UPW8 1703 aa27.81■■■□□ 2.04
ARPC1B-217ENST00000481997 CECR2Q9BXF3 1484 aa27.78■■■□□ 2.04
ARPC1B-217ENST00000481997 BICRAQ9NZM4 1560 aa27.73■■■□□ 2.03
ARPC1B-217ENST00000481997 CC2D2AQ9P2K1 1620 aa27.59■■■□□ 2.01
ARPC1B-217ENST00000481997 EIF4G1Q04637 1599 aaKnown RBP27.22■■□□□ 1.95
ARPC1B-217ENST00000481997 CUX2O14529 1486 aa26.98■■□□□ 1.91
ARPC1B-217ENST00000481997 BAZ1AQ9NRL2 1556 aaPredicted RBP26.81■■□□□ 1.88
ARPC1B-217ENST00000481997 TRIM41Q8WV44 630 aa26.76■■□□□ 1.87
ARPC1B-217ENST00000481997 SMARCA4P51532 1647 aa26.74■■□□□ 1.87
ARPC1B-217ENST00000481997 MROH2BQ7Z745 1585 aa26.74■■□□□ 1.87
ARPC1B-217ENST00000481997 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
ARPC1B-217ENST00000481997 SUPT5HO00267 1087 aaKnown RBP26.68■■□□□ 1.86
ARPC1B-217ENST00000481997 ERCC6Q03468 1493 aa26.65■■□□□ 1.86
ARPC1B-217ENST00000481997 WIZO95785 1651 aa26.51■■□□□ 1.83
ARPC1B-217ENST00000481997 PEG3Q9GZU2 1588 aa26.44■■□□□ 1.82
ARPC1B-217ENST00000481997 SMARCA2P51531 1590 aa26.37■■□□□ 1.81
ARPC1B-217ENST00000481997 ATAD2BQ9ULI0 1458 aa26.35■■□□□ 1.81
ARPC1B-217ENST00000481997 TOP2AP11388 1531 aaKnown RBP26.26■■□□□ 1.79
ARPC1B-217ENST00000481997 NCAPD3P42695 1498 aa26.21■■□□□ 1.79
ARPC1B-217ENST00000481997 BAZ1BQ9UIG0 1483 aaKnown RBP26.2■■□□□ 1.78
ARPC1B-217ENST00000481997 HMGXB3Q12766 1538 aa26.17■■□□□ 1.78
ARPC1B-217ENST00000481997 CCDC88BA6NC98 1476 aa25.94■■□□□ 1.74
ARPC1B-217ENST00000481997 NESP48681 1621 aa25.93■■□□□ 1.74
ARPC1B-217ENST00000481997 THOC2Q8NI27 1593 aaKnown RBP25.88■■□□□ 1.73
ARPC1B-217ENST00000481997 CHIC1Q5VXU3 224 aa25.83■■□□□ 1.73
ARPC1B-217ENST00000481997 OSCARQ8IYS5 282 aa25.63■■□□□ 1.69
ARPC1B-217ENST00000481997 AEBP2Q6ZN18 517 aaPredicted RBP25.6■■□□□ 1.69
ARPC1B-217ENST00000481997 LAMC3Q9Y6N6 1575 aa25.56■■□□□ 1.68
ARPC1B-217ENST00000481997 PDS5BQ9NTI5 1447 aa25.55■■□□□ 1.68
ARPC1B-217ENST00000481997 CFTRP13569 1480 aa25.52■■□□□ 1.68
ARPC1B-217ENST00000481997 KIF21AQ7Z4S6 1674 aa25.52■■□□□ 1.68
ARPC1B-217ENST00000481997 CADPSQ9ULU8 1353 aa25.49■■□□□ 1.67
ARPC1B-217ENST00000481997 PRDM2Q13029 1718 aa25.47■■□□□ 1.67
ARPC1B-217ENST00000481997 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
ARPC1B-217ENST00000481997 TRHP20396 242 aaPredicted RBP25.32■■□□□ 1.64
ARPC1B-217ENST00000481997 RIMBP3CA6NJZ7 1639 aa25.29■■□□□ 1.64
ARPC1B-217ENST00000481997 RIMBP3BA6NNM3 1639 aa25.29■■□□□ 1.64
ARPC1B-217ENST00000481997 RIMBP3Q9UFD9 1639 aa25.29■■□□□ 1.64
ARPC1B-217ENST00000481997 WDR62O43379 1518 aa25.28■■□□□ 1.64
ARPC1B-217ENST00000481997 ABCC8Q09428 1581 aa25.27■■□□□ 1.64
ARPC1B-217ENST00000481997 FANCD2Q9BXW9 1451 aa25.21■■□□□ 1.63
ARPC1B-217ENST00000481997 WRNQ14191 1432 aaPredicted RBP eCLIP25.18■■□□□ 1.62
ARPC1B-217ENST00000481997 CYB5RLQ6IPT4 315 aa25.12■■□□□ 1.61
ARPC1B-217ENST00000481997 CEP164Q9UPV0 1460 aa25.1■■□□□ 1.61
ARPC1B-217ENST00000481997 ARHGEF11O15085 1522 aa25.1■■□□□ 1.61
ARPC1B-217ENST00000481997 SYNJ1O43426 1573 aa25.09■■□□□ 1.61
ARPC1B-217ENST00000481997 TOP2BQ02880 1626 aa25.04■■□□□ 1.6
ARPC1B-217ENST00000481997 BIVM-ERCC5R4GMW8 1640 aa25.04■■□□□ 1.6
ARPC1B-217ENST00000481997 CUX1P39880 1505 aa25.03■■□□□ 1.6
ARPC1B-217ENST00000481997 DNMBPQ6XZF7 1577 aa24.96■■□□□ 1.59
ARPC1B-217ENST00000481997 URB2Q14146 1524 aaKnown RBP24.91■■□□□ 1.58
ARPC1B-217ENST00000481997 TOPBP1Q92547 1522 aa24.91■■□□□ 1.58
ARPC1B-217ENST00000481997 FGD5Q6ZNL6 1462 aa24.82■■□□□ 1.56
ARPC1B-217ENST00000481997 POLA1P09884 1462 aaPredicted RBP24.75■■□□□ 1.55
ARPC1B-217ENST00000481997 ARAP1Q96P48 1450 aa24.74■■□□□ 1.55
ARPC1B-217ENST00000481997 SOGA1O94964 1423 aa24.69■■□□□ 1.54
ARPC1B-217ENST00000481997 EEA1Q15075 1411 aa24.67■■□□□ 1.54
ARPC1B-217ENST00000481997 FAM9AQ8IZU1 332 aaPredicted RBP24.64■■□□□ 1.54
ARPC1B-217ENST00000481997 RAD54L2Q9Y4B4 1467 aa24.63■■□□□ 1.53
ARPC1B-217ENST00000481997 RUSC2Q8N2Y8 1516 aa24.62■■□□□ 1.53
ARPC1B-217ENST00000481997 ABCA10Q8WWZ4 1543 aa24.61■■□□□ 1.53
ARPC1B-217ENST00000481997 WDR97A6NE52 1622 aa24.6■■□□□ 1.53
ARPC1B-217ENST00000481997 ILDR1Q86SU0 546 aaPredicted RBP24.59■■□□□ 1.53
ARPC1B-217ENST00000481997 ZNF608Q9ULD9 1512 aaPredicted RBP24.59■■□□□ 1.53
ARPC1B-217ENST00000481997 TARBP1Q13395 1621 aaKnown RBP24.58■■□□□ 1.53
ARPC1B-217ENST00000481997 KIF27Q86VH2 1401 aa24.58■■□□□ 1.53
ARPC1B-217ENST00000481997 IFT140Q96RY7 1462 aa24.56■■□□□ 1.52
ARPC1B-217ENST00000481997 CSRNP3Q8WYN3 585 aa24.51■■□□□ 1.51
ARPC1B-217ENST00000481997 FBLN2P98095 1184 aa24.49■■□□□ 1.51
ARPC1B-217ENST00000481997 ABCA5Q8WWZ7 1642 aa24.46■■□□□ 1.51
ARPC1B-217ENST00000481997 TDRD9Q8NDG6 1382 aaKnown RBP24.42■■□□□ 1.5
ARPC1B-217ENST00000481997 CHD1O14646 1710 aa24.41■■□□□ 1.5
ARPC1B-217ENST00000481997 GAPVD1Q14C86 1478 aa24.39■■□□□ 1.5
ARPC1B-217ENST00000481997 KIF21BO75037 1637 aa24.37■■□□□ 1.49
ARPC1B-217ENST00000481997 IGF1RP08069 1367 aa24.37■■□□□ 1.49
ARPC1B-217ENST00000481997 LOC105371045A0A1W2PR82 267 aa24.36■■□□□ 1.49
ARPC1B-217ENST00000481997 EIF4G3O43432 1585 aaKnown RBP24.36■■□□□ 1.49
ARPC1B-217ENST00000481997 ERICH3Q5RHP9 1530 aa24.33■■□□□ 1.49
ARPC1B-217ENST00000481997 PBRM1Q86U86 1689 aa24.33■■□□□ 1.49
ARPC1B-217ENST00000481997 AQRO60306 1485 aaKnown RBP eCLIP24.32■■□□□ 1.486e-8■■■■■ 42.2
ARPC1B-217ENST00000481997 PRXQ9BXM0 1461 aa24.32■■□□□ 1.48
ARPC1B-217ENST00000481997 CUL7Q14999 1698 aa24.3■■□□□ 1.48
ARPC1B-217ENST00000481997 GOLGA3Q08378 1498 aa24.29■■□□□ 1.48
ARPC1B-217ENST00000481997 GRIN2BQ13224 1484 aa24.27■■□□□ 1.48
ARPC1B-217ENST00000481997 CARMIL1Q5VZK9 1371 aa24.25■■□□□ 1.47
ARPC1B-217ENST00000481997 EHMT2Q96KQ7 1210 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms