RNA–Protein interactions for RNA: ENST00000481946.5

PTK7-214, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-214ENST00000481946 NISCHQ9Y2I1 1504 aa32.14■■■□□ 2.74
PTK7-214ENST00000481946 ABCC9O60706 1549 aa29.34■■■□□ 2.29
PTK7-214ENST00000481946 CCDC180Q9P1Z9 1646 aa29.09■■■□□ 2.25
PTK7-214ENST00000481946 RB1CC1Q8TDY2 1594 aa27.81■■■□□ 2.04
PTK7-214ENST00000481946 DNAJC5BQ9UF47 199 aa27.79■■■□□ 2.04
PTK7-214ENST00000481946 NACADO15069 1562 aa27.52■■■□□ 2
PTK7-214ENST00000481946 UNC13AQ9UPW8 1703 aa27.32■■□□□ 1.96
PTK7-214ENST00000481946 DCAF8L2P0C7V8 631 aa27.21■■□□□ 1.95
PTK7-214ENST00000481946 PABPN1Q86U42 306 aaKnown RBP eCLIP27.2■■□□□ 1.94
PTK7-214ENST00000481946 BICRAQ9NZM4 1560 aa27.02■■□□□ 1.92
PTK7-214ENST00000481946 MYO15BQ96JP2 1530 aa27■■□□□ 1.91
PTK7-214ENST00000481946 SHROOM4Q9ULL8 1493 aa26.59■■□□□ 1.85
PTK7-214ENST00000481946 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
PTK7-214ENST00000481946 CC2D2AQ9P2K1 1620 aa26.54■■□□□ 1.84
PTK7-214ENST00000481946 DCAF1Q9Y4B6 1507 aa26.53■■□□□ 1.84
PTK7-214ENST00000481946 CECR2Q9BXF3 1484 aa26.46■■□□□ 1.83
PTK7-214ENST00000481946 SCRIBQ14160 1630 aa26.44■■□□□ 1.82
PTK7-214ENST00000481946 EIF4G1Q04637 1599 aaKnown RBP26.37■■□□□ 1.81
PTK7-214ENST00000481946 DNAJC5Q9H3Z4 198 aa25.78■■□□□ 1.72
PTK7-214ENST00000481946 CUX2O14529 1486 aa25.43■■□□□ 1.66
PTK7-214ENST00000481946 NCAPD3P42695 1498 aa25.36■■□□□ 1.65
PTK7-214ENST00000481946 ERCC6Q03468 1493 aa25.35■■□□□ 1.65
PTK7-214ENST00000481946 ATAD2BQ9ULI0 1458 aa25.24■■□□□ 1.63
PTK7-214ENST00000481946 SMARCA4P51532 1647 aa25.19■■□□□ 1.62
PTK7-214ENST00000481946 SMARCA2P51531 1590 aa25.18■■□□□ 1.62
PTK7-214ENST00000481946 HMGXB3Q12766 1538 aa25.18■■□□□ 1.62
PTK7-214ENST00000481946 NESP48681 1621 aa25.11■■□□□ 1.61
PTK7-214ENST00000481946 BAZ1BQ9UIG0 1483 aaKnown RBP24.99■■□□□ 1.59
PTK7-214ENST00000481946 THOC2Q8NI27 1593 aaKnown RBP24.98■■□□□ 1.59
PTK7-214ENST00000481946 BAZ1AQ9NRL2 1556 aaPredicted RBP24.98■■□□□ 1.59
PTK7-214ENST00000481946 PEG3Q9GZU2 1588 aa24.93■■□□□ 1.58
PTK7-214ENST00000481946 LAMC3Q9Y6N6 1575 aa24.91■■□□□ 1.58
PTK7-214ENST00000481946 KIF21AQ7Z4S6 1674 aa24.88■■□□□ 1.57
PTK7-214ENST00000481946 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
PTK7-214ENST00000481946 PDS5BQ9NTI5 1447 aa24.71■■□□□ 1.55
PTK7-214ENST00000481946 CADPSQ9ULU8 1353 aa24.55■■□□□ 1.52
PTK7-214ENST00000481946 MRC2Q9UBG0 1479 aa24.54■■□□□ 1.52
PTK7-214ENST00000481946 WDR62O43379 1518 aa24.52■■□□□ 1.52
PTK7-214ENST00000481946 WIZO95785 1651 aa24.5■■□□□ 1.51
PTK7-214ENST00000481946 TRIM41Q8WV44 630 aa24.5■■□□□ 1.51
PTK7-214ENST00000481946 CEP164Q9UPV0 1460 aa24.38■■□□□ 1.49
PTK7-214ENST00000481946 FANCD2Q9BXW9 1451 aa24.31■■□□□ 1.48
PTK7-214ENST00000481946 CFTRP13569 1480 aa24.23■■□□□ 1.47
PTK7-214ENST00000481946 OSCARQ8IYS5 282 aa24.16■■□□□ 1.46
PTK7-214ENST00000481946 URB2Q14146 1524 aaKnown RBP24.15■■□□□ 1.46
PTK7-214ENST00000481946 PRDM2Q13029 1718 aa24.14■■□□□ 1.45
PTK7-214ENST00000481946 TOP2AP11388 1531 aaKnown RBP24.13■■□□□ 1.45
PTK7-214ENST00000481946 RSF1Q96T23 1441 aaPredicted RBP24.08■■□□□ 1.44
PTK7-214ENST00000481946 RIMBP3CA6NJZ7 1639 aa24■■□□□ 1.43
PTK7-214ENST00000481946 RIMBP3BA6NNM3 1639 aa24■■□□□ 1.43
PTK7-214ENST00000481946 RIMBP3Q9UFD9 1639 aa24■■□□□ 1.43
PTK7-214ENST00000481946 ZNF608Q9ULD9 1512 aaPredicted RBP23.9■■□□□ 1.42
PTK7-214ENST00000481946 IFT140Q96RY7 1462 aa23.9■■□□□ 1.42
PTK7-214ENST00000481946 ARHGEF11O15085 1522 aa23.84■■□□□ 1.41
PTK7-214ENST00000481946 CCDC88BA6NC98 1476 aa23.83■■□□□ 1.41
PTK7-214ENST00000481946 TOPBP1Q92547 1522 aa23.83■■□□□ 1.41
PTK7-214ENST00000481946 EIF4G3O43432 1585 aaKnown RBP23.81■■□□□ 1.4
PTK7-214ENST00000481946 CHD1O14646 1710 aa23.76■■□□□ 1.39
PTK7-214ENST00000481946 ABCC8Q09428 1581 aa23.74■■□□□ 1.39
PTK7-214ENST00000481946 DNMBPQ6XZF7 1577 aa23.74■■□□□ 1.39
PTK7-214ENST00000481946 TARBP1Q13395 1621 aaKnown RBP23.69■■□□□ 1.38
PTK7-214ENST00000481946 CYB5RLQ6IPT4 315 aa23.62■■□□□ 1.37
PTK7-214ENST00000481946 AQRO60306 1485 aaKnown RBP eCLIP23.62■■□□□ 1.374e-6■□□□□ 10.2
PTK7-214ENST00000481946 ARAP1Q96P48 1450 aa23.57■■□□□ 1.36
PTK7-214ENST00000481946 POLA1P09884 1462 aaPredicted RBP23.56■■□□□ 1.36
PTK7-214ENST00000481946 FBLN2P98095 1184 aa23.51■■□□□ 1.35
PTK7-214ENST00000481946 TRHP20396 242 aaPredicted RBP23.48■■□□□ 1.35
PTK7-214ENST00000481946 RAD54L2Q9Y4B4 1467 aa23.46■■□□□ 1.35
PTK7-214ENST00000481946 SUPT5HO00267 1087 aaKnown RBP23.45■■□□□ 1.34
PTK7-214ENST00000481946 WDR97A6NE52 1622 aa23.42■■□□□ 1.34
PTK7-214ENST00000481946 SOGA1O94964 1423 aa23.41■■□□□ 1.34
PTK7-214ENST00000481946 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
PTK7-214ENST00000481946 CLASP1Q7Z460 1538 aa23.39■■□□□ 1.34
PTK7-214ENST00000481946 SNAPC4Q5SXM2 1469 aa23.39■■□□□ 1.34
PTK7-214ENST00000481946 FGD5Q6ZNL6 1462 aa23.36■■□□□ 1.33
PTK7-214ENST00000481946 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
PTK7-214ENST00000481946 MAGI1Q96QZ7 1491 aaPredicted RBP23.31■■□□□ 1.32
PTK7-214ENST00000481946 CUX1P39880 1505 aa23.28■■□□□ 1.32
PTK7-214ENST00000481946 CHMP7Q8WUX9 453 aaPredicted RBP23.28■■□□□ 1.32
PTK7-214ENST00000481946 PBRM1Q86U86 1689 aa23.28■■□□□ 1.32
PTK7-214ENST00000481946 GRIN2BQ13224 1484 aa23.27■■□□□ 1.32
PTK7-214ENST00000481946 SYNJ2O15056 1496 aa23.24■■□□□ 1.31
PTK7-214ENST00000481946 GAPVD1Q14C86 1478 aa23.14■■□□□ 1.29
PTK7-214ENST00000481946 ABCA5Q8WWZ7 1642 aa23.12■■□□□ 1.29
PTK7-214ENST00000481946 ABCA10Q8WWZ4 1543 aa23.07■■□□□ 1.28
PTK7-214ENST00000481946 AEBP2Q6ZN18 517 aaPredicted RBP23.06■■□□□ 1.28
PTK7-214ENST00000481946 ERCC6L2Q5T890 1561 aa23.01■■□□□ 1.27
PTK7-214ENST00000481946 GRIN2AQ12879 1464 aa22.98■■□□□ 1.27
PTK7-214ENST00000481946 ADAMTS12P58397 1594 aa22.96■■□□□ 1.27
PTK7-214ENST00000481946 CEP170Q5SW79 1584 aa22.94■■□□□ 1.26
PTK7-214ENST00000481946 SHROOM2Q13796 1616 aa22.91■■□□□ 1.26
PTK7-214ENST00000481946 NUP160Q12769 1436 aa22.9■■□□□ 1.26
PTK7-214ENST00000481946 BIVM-ERCC5R4GMW8 1640 aa22.89■■□□□ 1.25
PTK7-214ENST00000481946 KIF13AQ9H1H9 1805 aa22.88■■□□□ 1.25
PTK7-214ENST00000481946 WRNQ14191 1432 aaPredicted RBP eCLIP22.88■■□□□ 1.25
PTK7-214ENST00000481946 TOP2BQ02880 1626 aa22.85■■□□□ 1.25
PTK7-214ENST00000481946 FHAD1B1AJZ9 1412 aa22.82■■□□□ 1.24
PTK7-214ENST00000481946 ERICH3Q5RHP9 1530 aa22.79■■□□□ 1.24
PTK7-214ENST00000481946 PRG4Q92954 1404 aaPredicted RBP22.7■■□□□ 1.22
PTK7-214ENST00000481946 RUSC2Q8N2Y8 1516 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms