RNA–Protein interactions for RNA: ENST00000481202.5

PHF20-211, Transcript of PHD finger protein 20, humanhuman

TSL 1 (best)

Gene PHF20, Length 1,635 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-211ENST00000481202 NISCHQ9Y2I1 1504 aa29.61■■■□□ 2.33
PHF20-211ENST00000481202 CCDC180Q9P1Z9 1646 aa25.87■■□□□ 1.73
PHF20-211ENST00000481202 ZCCHC6Q5VYS8 1495 aaKnown RBP24.86■■□□□ 1.57
PHF20-211ENST00000481202 ABCC9O60706 1549 aa24.65■■□□□ 1.54
PHF20-211ENST00000481202 DCAF1Q9Y4B6 1507 aa24.48■■□□□ 1.51
PHF20-211ENST00000481202 DCAF8L2P0C7V8 631 aa24.47■■□□□ 1.51
PHF20-211ENST00000481202 MYO15BQ96JP2 1530 aa24.25■■□□□ 1.47
PHF20-211ENST00000481202 NACADO15069 1562 aa24.15■■□□□ 1.46
PHF20-211ENST00000481202 SHROOM4Q9ULL8 1493 aa24.04■■□□□ 1.44
PHF20-211ENST00000481202 RB1CC1Q8TDY2 1594 aa23.97■■□□□ 1.43
PHF20-211ENST00000481202 SCRIBQ14160 1630 aa23.8■■□□□ 1.4
PHF20-211ENST00000481202 UNC13AQ9UPW8 1703 aa23.46■■□□□ 1.35
PHF20-211ENST00000481202 BICRAQ9NZM4 1560 aa23.3■■□□□ 1.32
PHF20-211ENST00000481202 PABPN1Q86U42 306 aaKnown RBP eCLIP23.22■■□□□ 1.31
PHF20-211ENST00000481202 CECR2Q9BXF3 1484 aa23.05■■□□□ 1.28
PHF20-211ENST00000481202 SUPT5HO00267 1087 aaKnown RBP23.02■■□□□ 1.28
PHF20-211ENST00000481202 RSF1Q96T23 1441 aaPredicted RBP22.93■■□□□ 1.26
PHF20-211ENST00000481202 MROH2BQ7Z745 1585 aa22.89■■□□□ 1.26
PHF20-211ENST00000481202 BAZ1AQ9NRL2 1556 aaPredicted RBP22.86■■□□□ 1.25
PHF20-211ENST00000481202 SMARCA4P51532 1647 aa22.79■■□□□ 1.24
PHF20-211ENST00000481202 WIZO95785 1651 aa22.67■■□□□ 1.22
PHF20-211ENST00000481202 EIF4G1Q04637 1599 aaKnown RBP22.59■■□□□ 1.21
PHF20-211ENST00000481202 PEG3Q9GZU2 1588 aa22.52■■□□□ 1.2
PHF20-211ENST00000481202 ATAD2BQ9ULI0 1458 aa22.48■■□□□ 1.19
PHF20-211ENST00000481202 TOP2AP11388 1531 aaKnown RBP22.44■■□□□ 1.18
PHF20-211ENST00000481202 SMARCA2P51531 1590 aa22.43■■□□□ 1.18
PHF20-211ENST00000481202 BAZ1BQ9UIG0 1483 aaKnown RBP22.33■■□□□ 1.16
PHF20-211ENST00000481202 NCAPD3P42695 1498 aa22.31■■□□□ 1.16
PHF20-211ENST00000481202 CC2D2AQ9P2K1 1620 aa22.29■■□□□ 1.16
PHF20-211ENST00000481202 DNAJC5BQ9UF47 199 aa22.28■■□□□ 1.16
PHF20-211ENST00000481202 HMGXB3Q12766 1538 aa22.25■■□□□ 1.15
PHF20-211ENST00000481202 CCDC88BA6NC98 1476 aa22.21■■□□□ 1.15
PHF20-211ENST00000481202 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
PHF20-211ENST00000481202 CFTRP13569 1480 aa21.76■■□□□ 1.07
PHF20-211ENST00000481202 CADPSQ9ULU8 1353 aa21.72■■□□□ 1.07
PHF20-211ENST00000481202 ABCC8Q09428 1581 aa21.68■■□□□ 1.06
PHF20-211ENST00000481202 TRIM41Q8WV44 630 aa21.64■■□□□ 1.05
PHF20-211ENST00000481202 NESP48681 1621 aa21.61■■□□□ 1.05
PHF20-211ENST00000481202 PRDM2Q13029 1718 aa21.57■■□□□ 1.04
PHF20-211ENST00000481202 WRNQ14191 1432 aaPredicted RBP eCLIP21.57■■□□□ 1.04
PHF20-211ENST00000481202 LAMC3Q9Y6N6 1575 aa21.55■■□□□ 1.04
PHF20-211ENST00000481202 SYNJ1O43426 1573 aa21.49■■□□□ 1.03
PHF20-211ENST00000481202 FANCD2Q9BXW9 1451 aa21.49■■□□□ 1.03
PHF20-211ENST00000481202 CUX1P39880 1505 aa21.42■■□□□ 1.02
PHF20-211ENST00000481202 TOP2BQ02880 1626 aa21.39■■□□□ 1.02
PHF20-211ENST00000481202 PDS5BQ9NTI5 1447 aa21.39■■□□□ 1.01
PHF20-211ENST00000481202 BIVM-ERCC5R4GMW8 1640 aa21.37■■□□□ 1.01
PHF20-211ENST00000481202 CEP164Q9UPV0 1460 aa21.36■■□□□ 1.01
PHF20-211ENST00000481202 KIF21AQ7Z4S6 1674 aa21.3■■□□□ 1
PHF20-211ENST00000481202 FAM9AQ8IZU1 332 aaPredicted RBP21.26■□□□□ 0.99
PHF20-211ENST00000481202 SOGA1O94964 1423 aa21.25■□□□□ 0.99
PHF20-211ENST00000481202 URB2Q14146 1524 aaKnown RBP21.25■□□□□ 0.99
PHF20-211ENST00000481202 DNMBPQ6XZF7 1577 aa21.25■□□□□ 0.99
PHF20-211ENST00000481202 TOPBP1Q92547 1522 aa21.23■□□□□ 0.99
PHF20-211ENST00000481202 RUSC2Q8N2Y8 1516 aa21.2■□□□□ 0.98
PHF20-211ENST00000481202 FGD5Q6ZNL6 1462 aa21.19■□□□□ 0.98
PHF20-211ENST00000481202 MRC2Q9UBG0 1479 aa21.15■□□□□ 0.98
PHF20-211ENST00000481202 EEA1Q15075 1411 aa21.14■□□□□ 0.97
PHF20-211ENST00000481202 ERCC6Q03468 1493 aa21.13■□□□□ 0.97
PHF20-211ENST00000481202 LOC105371045A0A1W2PR82 267 aa21.12■□□□□ 0.97
PHF20-211ENST00000481202 POLA1P09884 1462 aaPredicted RBP21.12■□□□□ 0.97
PHF20-211ENST00000481202 RAD54L2Q9Y4B4 1467 aa21.06■□□□□ 0.96
PHF20-211ENST00000481202 CSRNP3Q8WYN3 585 aa21.05■□□□□ 0.96
PHF20-211ENST00000481202 WDR62O43379 1518 aa21.05■□□□□ 0.96
PHF20-211ENST00000481202 KIF27Q86VH2 1401 aa21.03■□□□□ 0.96
PHF20-211ENST00000481202 CUX2O14529 1486 aa21.03■□□□□ 0.96
PHF20-211ENST00000481202 THOC2Q8NI27 1593 aaKnown RBP21.02■□□□□ 0.96
PHF20-211ENST00000481202 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
PHF20-211ENST00000481202 EHMT2Q96KQ7 1210 aa20.97■□□□□ 0.95
PHF20-211ENST00000481202 WDR97A6NE52 1622 aa20.93■□□□□ 0.94
PHF20-211ENST00000481202 TARBP1Q13395 1621 aaKnown RBP20.93■□□□□ 0.94
PHF20-211ENST00000481202 KIF21BO75037 1637 aa20.89■□□□□ 0.93
PHF20-211ENST00000481202 IGF1RP08069 1367 aa20.88■□□□□ 0.93
PHF20-211ENST00000481202 PRXQ9BXM0 1461 aa20.87■□□□□ 0.93
PHF20-211ENST00000481202 TDRD9Q8NDG6 1382 aaKnown RBP20.87■□□□□ 0.93
PHF20-211ENST00000481202 GOLGA3Q08378 1498 aa20.86■□□□□ 0.93
PHF20-211ENST00000481202 IFT140Q96RY7 1462 aa20.86■□□□□ 0.93
PHF20-211ENST00000481202 ABCA5Q8WWZ7 1642 aa20.84■□□□□ 0.93
PHF20-211ENST00000481202 RAPGEF2Q9Y4G8 1499 aa20.83■□□□□ 0.92
PHF20-211ENST00000481202 GAPVD1Q14C86 1478 aa20.8■□□□□ 0.92
PHF20-211ENST00000481202 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
PHF20-211ENST00000481202 ZNF608Q9ULD9 1512 aaPredicted RBP20.78■□□□□ 0.92
PHF20-211ENST00000481202 CARMIL1Q5VZK9 1371 aa20.76■□□□□ 0.91
PHF20-211ENST00000481202 TNIKQ9UKE5 1360 aa20.76■□□□□ 0.91
PHF20-211ENST00000481202 AQRO60306 1485 aaKnown RBP eCLIP20.75■□□□□ 0.912e-7■■■□□ 16.8
PHF20-211ENST00000481202 UBTFP17480 764 aaKnown RBP20.75■□□□□ 0.91
PHF20-211ENST00000481202 CUL7Q14999 1698 aa20.69■□□□□ 0.9
PHF20-211ENST00000481202 EIF4G3O43432 1585 aaKnown RBP20.67■□□□□ 0.9
PHF20-211ENST00000481202 PBRM1Q86U86 1689 aa20.67■□□□□ 0.9
PHF20-211ENST00000481202 GRIN2BQ13224 1484 aa20.67■□□□□ 0.9
PHF20-211ENST00000481202 CEP162Q5TB80 1403 aa20.65■□□□□ 0.9
PHF20-211ENST00000481202 ADAMTS12P58397 1594 aa20.59■□□□□ 0.89
PHF20-211ENST00000481202 FHAD1B1AJZ9 1412 aa20.58■□□□□ 0.89
PHF20-211ENST00000481202 SNAPC4Q5SXM2 1469 aa20.57■□□□□ 0.88
PHF20-211ENST00000481202 CLIP1P30622 1438 aa20.52■□□□□ 0.88
PHF20-211ENST00000481202 MAGI1Q96QZ7 1491 aaPredicted RBP20.51■□□□□ 0.87
PHF20-211ENST00000481202 RANGAP1P46060 587 aaPredicted RBP20.48■□□□□ 0.87
PHF20-211ENST00000481202 SYNJ2O15056 1496 aa20.44■□□□□ 0.86
PHF20-211ENST00000481202 DNAJC5Q9H3Z4 198 aa20.43■□□□□ 0.86
PHF20-211ENST00000481202 GRIN2AQ12879 1464 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms