RNA–Protein interactions for RNA: ENST00000481136.1

PDCD10-211, Transcript of programmed cell death 10, humanhuman

TSL 2

Gene PDCD10, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-211ENST00000481136 NISCHQ9Y2I1 1504 aa28.14■■■□□ 2.1
PDCD10-211ENST00000481136 CCDC180Q9P1Z9 1646 aa25.12■■□□□ 1.61
PDCD10-211ENST00000481136 ABCC9O60706 1549 aa24.74■■□□□ 1.55
PDCD10-211ENST00000481136 RB1CC1Q8TDY2 1594 aa23.7■■□□□ 1.38
PDCD10-211ENST00000481136 NACADO15069 1562 aa23.65■■□□□ 1.38
PDCD10-211ENST00000481136 MYO15BQ96JP2 1530 aa23.48■■□□□ 1.35
PDCD10-211ENST00000481136 DCAF8L2P0C7V8 631 aa23.46■■□□□ 1.35
PDCD10-211ENST00000481136 ZCCHC6Q5VYS8 1495 aaKnown RBP23.4■■□□□ 1.34
PDCD10-211ENST00000481136 DCAF1Q9Y4B6 1507 aa23.28■■□□□ 1.32
PDCD10-211ENST00000481136 UNC13AQ9UPW8 1703 aa23.28■■□□□ 1.32
PDCD10-211ENST00000481136 BICRAQ9NZM4 1560 aa23.09■■□□□ 1.29
PDCD10-211ENST00000481136 PABPN1Q86U42 306 aaKnown RBP eCLIP23.07■■□□□ 1.28
PDCD10-211ENST00000481136 DNAJC5BQ9UF47 199 aa22.99■■□□□ 1.27
PDCD10-211ENST00000481136 SCRIBQ14160 1630 aa22.86■■□□□ 1.25
PDCD10-211ENST00000481136 SHROOM4Q9ULL8 1493 aa22.74■■□□□ 1.23
PDCD10-211ENST00000481136 EIF4G1Q04637 1599 aaKnown RBP22.44■■□□□ 1.18
PDCD10-211ENST00000481136 CC2D2AQ9P2K1 1620 aa22.41■■□□□ 1.18
PDCD10-211ENST00000481136 CECR2Q9BXF3 1484 aa22.25■■□□□ 1.15
PDCD10-211ENST00000481136 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
PDCD10-211ENST00000481136 NCAPD3P42695 1498 aa21.84■■□□□ 1.09
PDCD10-211ENST00000481136 ATAD2BQ9ULI0 1458 aa21.82■■□□□ 1.08
PDCD10-211ENST00000481136 BAZ1AQ9NRL2 1556 aaPredicted RBP21.79■■□□□ 1.08
PDCD10-211ENST00000481136 SMARCA2P51531 1590 aa21.74■■□□□ 1.07
PDCD10-211ENST00000481136 PEG3Q9GZU2 1588 aa21.7■■□□□ 1.06
PDCD10-211ENST00000481136 AEBP2Q6ZN18 517 aaPredicted RBP21.7■■□□□ 1.06
PDCD10-211ENST00000481136 HMGXB3Q12766 1538 aa21.7■■□□□ 1.06
PDCD10-211ENST00000481136 MROH2BQ7Z745 1585 aa21.7■■□□□ 1.06
PDCD10-211ENST00000481136 BAZ1BQ9UIG0 1483 aaKnown RBP21.57■■□□□ 1.04
PDCD10-211ENST00000481136 WIZO95785 1651 aa21.45■■□□□ 1.02
PDCD10-211ENST00000481136 NESP48681 1621 aa21.38■■□□□ 1.01
PDCD10-211ENST00000481136 RSF1Q96T23 1441 aaPredicted RBP21.35■■□□□ 1.01
PDCD10-211ENST00000481136 LAMC3Q9Y6N6 1575 aa21.28■■□□□ 1
PDCD10-211ENST00000481136 ERCC6Q03468 1493 aa21.26■□□□□ 0.99
PDCD10-211ENST00000481136 CUX2O14529 1486 aa21.2■□□□□ 0.98
PDCD10-211ENST00000481136 TOP2AP11388 1531 aaKnown RBP21.18■□□□□ 0.98
PDCD10-211ENST00000481136 CADPSQ9ULU8 1353 aa21.16■□□□□ 0.98
PDCD10-211ENST00000481136 KIF21AQ7Z4S6 1674 aa21.13■□□□□ 0.97
PDCD10-211ENST00000481136 THOC2Q8NI27 1593 aaKnown RBP21.12■□□□□ 0.97
PDCD10-211ENST00000481136 PDS5BQ9NTI5 1447 aa21.09■□□□□ 0.97
PDCD10-211ENST00000481136 CFTRP13569 1480 aa21.02■□□□□ 0.96
PDCD10-211ENST00000481136 CCDC88BA6NC98 1476 aa20.94■□□□□ 0.94
PDCD10-211ENST00000481136 FANCD2Q9BXW9 1451 aa20.91■□□□□ 0.94
PDCD10-211ENST00000481136 MRC2Q9UBG0 1479 aa20.91■□□□□ 0.94
PDCD10-211ENST00000481136 WDR62O43379 1518 aa20.9■□□□□ 0.94
PDCD10-211ENST00000481136 CEP164Q9UPV0 1460 aa20.88■□□□□ 0.93
PDCD10-211ENST00000481136 PRDM2Q13029 1718 aa20.86■□□□□ 0.93
PDCD10-211ENST00000481136 DNAJC5Q9H3Z4 198 aa20.82■□□□□ 0.92
PDCD10-211ENST00000481136 URB2Q14146 1524 aaKnown RBP20.75■□□□□ 0.91
PDCD10-211ENST00000481136 TOPBP1Q92547 1522 aa20.58■□□□□ 0.88
PDCD10-211ENST00000481136 SUPT5HO00267 1087 aaKnown RBP20.54■□□□□ 0.88
PDCD10-211ENST00000481136 ABCC8Q09428 1581 aa20.52■□□□□ 0.88
PDCD10-211ENST00000481136 DNMBPQ6XZF7 1577 aa20.52■□□□□ 0.88
PDCD10-211ENST00000481136 IFT140Q96RY7 1462 aa20.47■□□□□ 0.87
PDCD10-211ENST00000481136 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
PDCD10-211ENST00000481136 TARBP1Q13395 1621 aaKnown RBP20.41■□□□□ 0.86
PDCD10-211ENST00000481136 POLA1P09884 1462 aaPredicted RBP20.38■□□□□ 0.85
PDCD10-211ENST00000481136 CUX1P39880 1505 aa20.35■□□□□ 0.85
PDCD10-211ENST00000481136 EIF4G3O43432 1585 aaKnown RBP20.34■□□□□ 0.85
PDCD10-211ENST00000481136 RAD54L2Q9Y4B4 1467 aa20.3■□□□□ 0.84
PDCD10-211ENST00000481136 FGD5Q6ZNL6 1462 aa20.29■□□□□ 0.84
PDCD10-211ENST00000481136 AQRO60306 1485 aaKnown RBP eCLIP20.28■□□□□ 0.84
PDCD10-211ENST00000481136 SOGA1O94964 1423 aa20.27■□□□□ 0.83
PDCD10-211ENST00000481136 OSCARQ8IYS5 282 aa20.24■□□□□ 0.83
PDCD10-211ENST00000481136 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
PDCD10-211ENST00000481136 TDRD9Q8NDG6 1382 aaKnown RBP20.18■□□□□ 0.82
PDCD10-211ENST00000481136 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
PDCD10-211ENST00000481136 CHD1O14646 1710 aa20.13■□□□□ 0.81
PDCD10-211ENST00000481136 BIVM-ERCC5R4GMW8 1640 aa20.13■□□□□ 0.81
PDCD10-211ENST00000481136 TOP2BQ02880 1626 aa20.11■□□□□ 0.81
PDCD10-211ENST00000481136 SYNJ1O43426 1573 aa20.11■□□□□ 0.81
PDCD10-211ENST00000481136 ABCA10Q8WWZ4 1543 aa20.1■□□□□ 0.81
PDCD10-211ENST00000481136 WRNQ14191 1432 aaPredicted RBP eCLIP20.09■□□□□ 0.81
PDCD10-211ENST00000481136 SNAPC4Q5SXM2 1469 aa20.06■□□□□ 0.8
PDCD10-211ENST00000481136 ABCA5Q8WWZ7 1642 aa20.06■□□□□ 0.8
PDCD10-211ENST00000481136 GRIN2BQ13224 1484 aa20.05■□□□□ 0.8
PDCD10-211ENST00000481136 PBRM1Q86U86 1689 aa20.03■□□□□ 0.8
PDCD10-211ENST00000481136 GAPVD1Q14C86 1478 aa20.03■□□□□ 0.8
PDCD10-211ENST00000481136 MAGI1Q96QZ7 1491 aaPredicted RBP20.03■□□□□ 0.8
PDCD10-211ENST00000481136 RIMBP3CA6NJZ7 1639 aa20.01■□□□□ 0.79
PDCD10-211ENST00000481136 RIMBP3BA6NNM3 1639 aa20.01■□□□□ 0.79
PDCD10-211ENST00000481136 RIMBP3Q9UFD9 1639 aa20.01■□□□□ 0.79
PDCD10-211ENST00000481136 FBLN2P98095 1184 aa19.97■□□□□ 0.79
PDCD10-211ENST00000481136 ARHGEF11O15085 1522 aa19.97■□□□□ 0.79
PDCD10-211ENST00000481136 SYNJ2O15056 1496 aa19.96■□□□□ 0.79
PDCD10-211ENST00000481136 TRIM41Q8WV44 630 aa19.94■□□□□ 0.78
PDCD10-211ENST00000481136 CLASP1Q7Z460 1538 aa19.92■□□□□ 0.78
PDCD10-211ENST00000481136 CHMP7Q8WUX9 453 aaPredicted RBP19.91■□□□□ 0.78
PDCD10-211ENST00000481136 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
PDCD10-211ENST00000481136 ERICH3Q5RHP9 1530 aa19.84■□□□□ 0.77
PDCD10-211ENST00000481136 GRIN2AQ12879 1464 aa19.81■□□□□ 0.76
PDCD10-211ENST00000481136 ARAP1Q96P48 1450 aa19.79■□□□□ 0.76
PDCD10-211ENST00000481136 FHAD1B1AJZ9 1412 aa19.78■□□□□ 0.76
PDCD10-211ENST00000481136 NUP160Q12769 1436 aa19.76■□□□□ 0.75
PDCD10-211ENST00000481136 CEP170Q5SW79 1584 aa19.76■□□□□ 0.75
PDCD10-211ENST00000481136 CYB5RLQ6IPT4 315 aa19.74■□□□□ 0.75
PDCD10-211ENST00000481136 IGF1RP08069 1367 aa19.68■□□□□ 0.74
PDCD10-211ENST00000481136 SHROOM2Q13796 1616 aa19.67■□□□□ 0.74
PDCD10-211ENST00000481136 KIF27Q86VH2 1401 aa19.67■□□□□ 0.74
PDCD10-211ENST00000481136 ERCC6L2Q5T890 1561 aa19.65■□□□□ 0.74
PDCD10-211ENST00000481136 CUL7Q14999 1698 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms