RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 NISCHQ9Y2I1 1504 aa23.85■■□□□ 1.41
GTF3C2-210ENST00000480989 ABCC9O60706 1549 aa21.55■■□□□ 1.04
GTF3C2-210ENST00000480989 CCDC180Q9P1Z9 1646 aa21.45■■□□□ 1.02
GTF3C2-210ENST00000480989 RB1CC1Q8TDY2 1594 aa20.42■□□□□ 0.86
GTF3C2-210ENST00000480989 DNAJC5BQ9UF47 199 aa20.38■□□□□ 0.85
GTF3C2-210ENST00000480989 NACADO15069 1562 aa20.25■□□□□ 0.83
GTF3C2-210ENST00000480989 UNC13AQ9UPW8 1703 aa20.13■□□□□ 0.81
GTF3C2-210ENST00000480989 PABPN1Q86U42 306 aaKnown RBP eCLIP20.02■□□□□ 0.8
GTF3C2-210ENST00000480989 DCAF8L2P0C7V8 631 aa20.01■□□□□ 0.79
GTF3C2-210ENST00000480989 BICRAQ9NZM4 1560 aa19.98■□□□□ 0.79
GTF3C2-210ENST00000480989 MYO15BQ96JP2 1530 aa19.96■□□□□ 0.79
GTF3C2-210ENST00000480989 ZCCHC6Q5VYS8 1495 aaKnown RBP19.78■□□□□ 0.76
GTF3C2-210ENST00000480989 DCAF1Q9Y4B6 1507 aa19.68■□□□□ 0.74
GTF3C2-210ENST00000480989 SCRIBQ14160 1630 aa19.56■□□□□ 0.72
GTF3C2-210ENST00000480989 SHROOM4Q9ULL8 1493 aa19.54■□□□□ 0.72
GTF3C2-210ENST00000480989 CC2D2AQ9P2K1 1620 aa19.49■□□□□ 0.71
GTF3C2-210ENST00000480989 EIF4G1Q04637 1599 aaKnown RBP19.42■□□□□ 0.7
GTF3C2-210ENST00000480989 CECR2Q9BXF3 1484 aa19.39■□□□□ 0.69
GTF3C2-210ENST00000480989 NCAPD3P42695 1498 aa18.72■□□□□ 0.59
GTF3C2-210ENST00000480989 ATAD2BQ9ULI0 1458 aa18.67■□□□□ 0.58
GTF3C2-210ENST00000480989 DNAJC5Q9H3Z4 198 aa18.67■□□□□ 0.58
GTF3C2-210ENST00000480989 SMARCA4P51532 1647 aa18.66■□□□□ 0.58
GTF3C2-210ENST00000480989 HMGXB3Q12766 1538 aa18.59■□□□□ 0.57
GTF3C2-210ENST00000480989 CUX2O14529 1486 aa18.57■□□□□ 0.56
GTF3C2-210ENST00000480989 SMARCA2P51531 1590 aa18.56■□□□□ 0.56
GTF3C2-210ENST00000480989 NESP48681 1621 aa18.54■□□□□ 0.56
GTF3C2-210ENST00000480989 ERCC6Q03468 1493 aa18.52■□□□□ 0.55
GTF3C2-210ENST00000480989 BAZ1AQ9NRL2 1556 aaPredicted RBP18.48■□□□□ 0.55
GTF3C2-210ENST00000480989 PEG3Q9GZU2 1588 aa18.47■□□□□ 0.55
GTF3C2-210ENST00000480989 BAZ1BQ9UIG0 1483 aaKnown RBP18.44■□□□□ 0.54
GTF3C2-210ENST00000480989 MROH2BQ7Z745 1585 aa18.42■□□□□ 0.54
GTF3C2-210ENST00000480989 THOC2Q8NI27 1593 aaKnown RBP18.39■□□□□ 0.53
GTF3C2-210ENST00000480989 LAMC3Q9Y6N6 1575 aa18.31■□□□□ 0.52
GTF3C2-210ENST00000480989 KIF21AQ7Z4S6 1674 aa18.31■□□□□ 0.52
GTF3C2-210ENST00000480989 WIZO95785 1651 aa18.21■□□□□ 0.51
GTF3C2-210ENST00000480989 PDS5BQ9NTI5 1447 aa18.14■□□□□ 0.49
GTF3C2-210ENST00000480989 CADPSQ9ULU8 1353 aa18.12■□□□□ 0.49
GTF3C2-210ENST00000480989 WDR62O43379 1518 aa18.07■□□□□ 0.48
GTF3C2-210ENST00000480989 AEBP2Q6ZN18 517 aaPredicted RBP18.06■□□□□ 0.48
GTF3C2-210ENST00000480989 MRC2Q9UBG0 1479 aa18.06■□□□□ 0.48
GTF3C2-210ENST00000480989 RSF1Q96T23 1441 aaPredicted RBP17.97■□□□□ 0.47
GTF3C2-210ENST00000480989 CEP164Q9UPV0 1460 aa17.95■□□□□ 0.46
GTF3C2-210ENST00000480989 FANCD2Q9BXW9 1451 aa17.94■□□□□ 0.46
GTF3C2-210ENST00000480989 CFTRP13569 1480 aa17.93■□□□□ 0.46
GTF3C2-210ENST00000480989 TOP2AP11388 1531 aaKnown RBP17.92■□□□□ 0.46
GTF3C2-210ENST00000480989 URB2Q14146 1524 aaKnown RBP17.86■□□□□ 0.45
GTF3C2-210ENST00000480989 PRDM2Q13029 1718 aa17.79■□□□□ 0.44
GTF3C2-210ENST00000480989 TRIM41Q8WV44 630 aa17.77■□□□□ 0.44
GTF3C2-210ENST00000480989 CCDC88BA6NC98 1476 aa17.71■□□□□ 0.43
GTF3C2-210ENST00000480989 ZNF608Q9ULD9 1512 aaPredicted RBP17.67■□□□□ 0.42
GTF3C2-210ENST00000480989 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
GTF3C2-210ENST00000480989 TOPBP1Q92547 1522 aa17.62■□□□□ 0.41
GTF3C2-210ENST00000480989 IFT140Q96RY7 1462 aa17.58■□□□□ 0.41
GTF3C2-210ENST00000480989 RIMBP3CA6NJZ7 1639 aa17.56■□□□□ 0.4
GTF3C2-210ENST00000480989 RIMBP3BA6NNM3 1639 aa17.56■□□□□ 0.4
GTF3C2-210ENST00000480989 RIMBP3Q9UFD9 1639 aa17.56■□□□□ 0.4
GTF3C2-210ENST00000480989 EIF4G3O43432 1585 aaKnown RBP17.55■□□□□ 0.4
GTF3C2-210ENST00000480989 DNMBPQ6XZF7 1577 aa17.53■□□□□ 0.4
GTF3C2-210ENST00000480989 TARBP1Q13395 1621 aaKnown RBP17.51■□□□□ 0.39
GTF3C2-210ENST00000480989 CHIC1Q5VXU3 224 aa17.48■□□□□ 0.39
GTF3C2-210ENST00000480989 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
GTF3C2-210ENST00000480989 CHD1O14646 1710 aa17.46■□□□□ 0.39
GTF3C2-210ENST00000480989 ABCC8Q09428 1581 aa17.45■□□□□ 0.38
GTF3C2-210ENST00000480989 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.382e-7■■■■■ 29
GTF3C2-210ENST00000480989 POLA1P09884 1462 aaPredicted RBP17.44■□□□□ 0.38
GTF3C2-210ENST00000480989 RAD54L2Q9Y4B4 1467 aa17.38■□□□□ 0.37
GTF3C2-210ENST00000480989 ARAP1Q96P48 1450 aa17.32■□□□□ 0.36
GTF3C2-210ENST00000480989 CUX1P39880 1505 aa17.31■□□□□ 0.36
GTF3C2-210ENST00000480989 FGD5Q6ZNL6 1462 aa17.3■□□□□ 0.36
GTF3C2-210ENST00000480989 TDRD9Q8NDG6 1382 aaKnown RBP17.29■□□□□ 0.36
GTF3C2-210ENST00000480989 SOGA1O94964 1423 aa17.28■□□□□ 0.36
GTF3C2-210ENST00000480989 WDR97A6NE52 1622 aa17.27■□□□□ 0.36
GTF3C2-210ENST00000480989 SNAPC4Q5SXM2 1469 aa17.26■□□□□ 0.35
GTF3C2-210ENST00000480989 CYB5RLQ6IPT4 315 aa17.25■□□□□ 0.35
GTF3C2-210ENST00000480989 CLASP1Q7Z460 1538 aa17.25■□□□□ 0.35
GTF3C2-210ENST00000480989 FBLN2P98095 1184 aa17.21■□□□□ 0.35
GTF3C2-210ENST00000480989 PBRM1Q86U86 1689 aa17.17■□□□□ 0.34
GTF3C2-210ENST00000480989 MAGI1Q96QZ7 1491 aaPredicted RBP17.17■□□□□ 0.34
GTF3C2-210ENST00000480989 GRIN2BQ13224 1484 aa17.15■□□□□ 0.34
GTF3C2-210ENST00000480989 SYNJ1O43426 1573 aa17.13■□□□□ 0.33
GTF3C2-210ENST00000480989 ABCA5Q8WWZ7 1642 aa17.13■□□□□ 0.33
GTF3C2-210ENST00000480989 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
GTF3C2-210ENST00000480989 GAPVD1Q14C86 1478 aa17.09■□□□□ 0.33
GTF3C2-210ENST00000480989 ABCA10Q8WWZ4 1543 aa17.09■□□□□ 0.33
GTF3C2-210ENST00000480989 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
GTF3C2-210ENST00000480989 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
GTF3C2-210ENST00000480989 ERCC6L2Q5T890 1561 aa17.02■□□□□ 0.32
GTF3C2-210ENST00000480989 BIVM-ERCC5R4GMW8 1640 aa17■□□□□ 0.31
GTF3C2-210ENST00000480989 ADAMTS12P58397 1594 aa16.99■□□□□ 0.31
GTF3C2-210ENST00000480989 SUPT5HO00267 1087 aaKnown RBP16.98■□□□□ 0.31
GTF3C2-210ENST00000480989 CEP170Q5SW79 1584 aa16.98■□□□□ 0.31
GTF3C2-210ENST00000480989 TOP2BQ02880 1626 aa16.97■□□□□ 0.31
GTF3C2-210ENST00000480989 GRIN2AQ12879 1464 aa16.97■□□□□ 0.31
GTF3C2-210ENST00000480989 NUP160Q12769 1436 aa16.94■□□□□ 0.3
GTF3C2-210ENST00000480989 WRNQ14191 1432 aaPredicted RBP eCLIP16.92■□□□□ 0.3
GTF3C2-210ENST00000480989 SHROOM2Q13796 1616 aa16.91■□□□□ 0.3
GTF3C2-210ENST00000480989 FHAD1B1AJZ9 1412 aa16.85■□□□□ 0.29
GTF3C2-210ENST00000480989 ERICH3Q5RHP9 1530 aa16.85■□□□□ 0.29
GTF3C2-210ENST00000480989 KIF13AQ9H1H9 1805 aa16.77■□□□□ 0.27
GTF3C2-210ENST00000480989 RUSC2Q8N2Y8 1516 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms