RNA–Protein interactions for RNA: ENST00000480538.2

TMEM120A-208, Transcript of transmembrane protein 120A, humanhuman

TSL 2

Gene TMEM120A, Length 668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM120A-208ENST00000480538 NISCHQ9Y2I1 1504 aa45.14■■■■■ 4.82
TMEM120A-208ENST00000480538 CCDC180Q9P1Z9 1646 aa40.58■■■■■ 4.09
TMEM120A-208ENST00000480538 ABCC9O60706 1549 aa40.35■■■■■ 4.05
TMEM120A-208ENST00000480538 RB1CC1Q8TDY2 1594 aa38.57■■■■□ 3.76
TMEM120A-208ENST00000480538 NACADO15069 1562 aa38.31■■■■□ 3.72
TMEM120A-208ENST00000480538 DCAF8L2P0C7V8 631 aa38.03■■■■□ 3.68
TMEM120A-208ENST00000480538 MYO15BQ96JP2 1530 aa37.84■■■■□ 3.65
TMEM120A-208ENST00000480538 UNC13AQ9UPW8 1703 aa37.59■■■■□ 3.61
TMEM120A-208ENST00000480538 DNAJC5BQ9UF47 199 aa37.58■■■■□ 3.61
TMEM120A-208ENST00000480538 PABPN1Q86U42 306 aaKnown RBP eCLIP37.51■■■■□ 3.6
TMEM120A-208ENST00000480538 ZCCHC6Q5VYS8 1495 aaKnown RBP37.45■■■■□ 3.59
TMEM120A-208ENST00000480538 DCAF1Q9Y4B6 1507 aa37.36■■■■□ 3.57
TMEM120A-208ENST00000480538 BICRAQ9NZM4 1560 aa37.29■■■■□ 3.56
TMEM120A-208ENST00000480538 SHROOM4Q9ULL8 1493 aa37.02■■■■□ 3.52
TMEM120A-208ENST00000480538 SCRIBQ14160 1630 aa36.88■■■■□ 3.5
TMEM120A-208ENST00000480538 CC2D2AQ9P2K1 1620 aa36.48■■■■□ 3.43
TMEM120A-208ENST00000480538 EIF4G1Q04637 1599 aaKnown RBP36.45■■■■□ 3.43
TMEM120A-208ENST00000480538 CECR2Q9BXF3 1484 aa36.37■■■■□ 3.41
TMEM120A-208ENST00000480538 NCAPD3P42695 1498 aa35.31■■■■□ 3.24
TMEM120A-208ENST00000480538 SMARCA4P51532 1647 aa35.22■■■■□ 3.23
TMEM120A-208ENST00000480538 ATAD2BQ9ULI0 1458 aa35.2■■■■□ 3.23
TMEM120A-208ENST00000480538 SMARCA2P51531 1590 aa35.2■■■■□ 3.23
TMEM120A-208ENST00000480538 HMGXB3Q12766 1538 aa35.12■■■■□ 3.21
TMEM120A-208ENST00000480538 BAZ1AQ9NRL2 1556 aaPredicted RBP35.11■■■■□ 3.21
TMEM120A-208ENST00000480538 ERCC6Q03468 1493 aa34.93■■■■□ 3.18
TMEM120A-208ENST00000480538 BAZ1BQ9UIG0 1483 aaKnown RBP34.93■■■■□ 3.18
TMEM120A-208ENST00000480538 PEG3Q9GZU2 1588 aa34.9■■■■□ 3.18
TMEM120A-208ENST00000480538 CUX2O14529 1486 aa34.84■■■■□ 3.17
TMEM120A-208ENST00000480538 MROH2BQ7Z745 1585 aa34.73■■■■□ 3.15
TMEM120A-208ENST00000480538 NESP48681 1621 aa34.63■■■■□ 3.13
TMEM120A-208ENST00000480538 DNAJC5Q9H3Z4 198 aa34.58■■■■□ 3.13
TMEM120A-208ENST00000480538 LAMC3Q9Y6N6 1575 aa34.57■■■■□ 3.12
TMEM120A-208ENST00000480538 PDS5BQ9NTI5 1447 aa34.37■■■■□ 3.09
TMEM120A-208ENST00000480538 THOC2Q8NI27 1593 aaKnown RBP34.36■■■■□ 3.09
TMEM120A-208ENST00000480538 WIZO95785 1651 aa34.34■■■■□ 3.09
TMEM120A-208ENST00000480538 KIF21AQ7Z4S6 1674 aa34.28■■■■□ 3.08
TMEM120A-208ENST00000480538 CADPSQ9ULU8 1353 aa34.24■■■■□ 3.07
TMEM120A-208ENST00000480538 RSF1Q96T23 1441 aaPredicted RBP34.05■■■■□ 3.04
TMEM120A-208ENST00000480538 MRC2Q9UBG0 1479 aa34.03■■■■□ 3.04
TMEM120A-208ENST00000480538 TOP2AP11388 1531 aaKnown RBP33.99■■■■□ 3.03
TMEM120A-208ENST00000480538 CEP164Q9UPV0 1460 aa33.94■■■■□ 3.02
TMEM120A-208ENST00000480538 WDR62O43379 1518 aa33.94■■■■□ 3.02
TMEM120A-208ENST00000480538 CFTRP13569 1480 aa33.87■■■■□ 3.01
TMEM120A-208ENST00000480538 FANCD2Q9BXW9 1451 aa33.87■■■■□ 3.01
TMEM120A-208ENST00000480538 PRDM2Q13029 1718 aa33.65■■■□□ 2.98
TMEM120A-208ENST00000480538 CCDC88BA6NC98 1476 aa33.52■■■□□ 2.96
TMEM120A-208ENST00000480538 URB2Q14146 1524 aaKnown RBP33.52■■■□□ 2.96
TMEM120A-208ENST00000480538 ABCC8Q09428 1581 aa33.26■■■□□ 2.92
TMEM120A-208ENST00000480538 IFT140Q96RY7 1462 aa33.25■■■□□ 2.91
TMEM120A-208ENST00000480538 TOPBP1Q92547 1522 aa33.23■■■□□ 2.91
TMEM120A-208ENST00000480538 OSCARQ8IYS5 282 aa33.21■■■□□ 2.91
TMEM120A-208ENST00000480538 DNMBPQ6XZF7 1577 aa33.16■■■□□ 2.9
TMEM120A-208ENST00000480538 TRIM41Q8WV44 630 aa33.13■■■□□ 2.89
TMEM120A-208ENST00000480538 ZNF608Q9ULD9 1512 aaPredicted RBP33.07■■■□□ 2.89
TMEM120A-208ENST00000480538 EIF4G3O43432 1585 aaKnown RBP32.99■■■□□ 2.87
TMEM120A-208ENST00000480538 TARBP1Q13395 1621 aaKnown RBP32.9■■■□□ 2.86
TMEM120A-208ENST00000480538 POLA1P09884 1462 aaPredicted RBP32.88■■■□□ 2.85
TMEM120A-208ENST00000480538 AQRO60306 1485 aaKnown RBP eCLIP32.8■■■□□ 2.84
TMEM120A-208ENST00000480538 RIMBP3CA6NJZ7 1639 aa32.75■■■□□ 2.83
TMEM120A-208ENST00000480538 RIMBP3BA6NNM3 1639 aa32.75■■■□□ 2.83
TMEM120A-208ENST00000480538 RIMBP3Q9UFD9 1639 aa32.75■■■□□ 2.83
TMEM120A-208ENST00000480538 SOGA1O94964 1423 aa32.74■■■□□ 2.83
TMEM120A-208ENST00000480538 WDR97A6NE52 1622 aa32.73■■■□□ 2.83
TMEM120A-208ENST00000480538 CHD1O14646 1710 aa32.71■■■□□ 2.83
TMEM120A-208ENST00000480538 FGD5Q6ZNL6 1462 aa32.7■■■□□ 2.83
TMEM120A-208ENST00000480538 RAD54L2Q9Y4B4 1467 aa32.7■■■□□ 2.83
TMEM120A-208ENST00000480538 ARHGEF11O15085 1522 aa32.67■■■□□ 2.82
TMEM120A-208ENST00000480538 CUX1P39880 1505 aa32.64■■■□□ 2.82
TMEM120A-208ENST00000480538 FBLN2P98095 1184 aa32.62■■■□□ 2.81
TMEM120A-208ENST00000480538 TDRD9Q8NDG6 1382 aaKnown RBP32.61■■■□□ 2.81
TMEM120A-208ENST00000480538 SUPT5HO00267 1087 aaKnown RBP32.61■■■□□ 2.81
TMEM120A-208ENST00000480538 SNAPC4Q5SXM2 1469 aa32.53■■■□□ 2.8
TMEM120A-208ENST00000480538 MAGI1Q96QZ7 1491 aaPredicted RBP32.51■■■□□ 2.79
TMEM120A-208ENST00000480538 GRIN2BQ13224 1484 aa32.48■■■□□ 2.79
TMEM120A-208ENST00000480538 CHMP7Q8WUX9 453 aaPredicted RBP32.42■■■□□ 2.78
TMEM120A-208ENST00000480538 SYNJ1O43426 1573 aa32.41■■■□□ 2.78
TMEM120A-208ENST00000480538 PBRM1Q86U86 1689 aa32.37■■■□□ 2.77
TMEM120A-208ENST00000480538 SYNJ2O15056 1496 aa32.37■■■□□ 2.77
TMEM120A-208ENST00000480538 CYB5RLQ6IPT4 315 aa32.37■■■□□ 2.77
TMEM120A-208ENST00000480538 GAPVD1Q14C86 1478 aa32.36■■■□□ 2.77
TMEM120A-208ENST00000480538 ABCA10Q8WWZ4 1543 aa32.36■■■□□ 2.77
TMEM120A-208ENST00000480538 CLASP1Q7Z460 1538 aa32.33■■■□□ 2.77
TMEM120A-208ENST00000480538 ARAP1Q96P48 1450 aa32.32■■■□□ 2.76
TMEM120A-208ENST00000480538 ABCA5Q8WWZ7 1642 aa32.29■■■□□ 2.76
TMEM120A-208ENST00000480538 WRNQ14191 1432 aaPredicted RBP eCLIP32.27■■■□□ 2.76
TMEM120A-208ENST00000480538 BIVM-ERCC5R4GMW8 1640 aa32.22■■■□□ 2.75
TMEM120A-208ENST00000480538 TOP2BQ02880 1626 aa32.22■■■□□ 2.75
TMEM120A-208ENST00000480538 ADAMTS12P58397 1594 aa32.07■■■□□ 2.72
TMEM120A-208ENST00000480538 GRIN2AQ12879 1464 aa32.05■■■□□ 2.72
TMEM120A-208ENST00000480538 TRHP20396 242 aaPredicted RBP32.04■■■□□ 2.72
TMEM120A-208ENST00000480538 ERICH3Q5RHP9 1530 aa31.99■■■□□ 2.71
TMEM120A-208ENST00000480538 FHAD1B1AJZ9 1412 aa31.98■■■□□ 2.71
TMEM120A-208ENST00000480538 NUP160Q12769 1436 aa31.92■■■□□ 2.7
TMEM120A-208ENST00000480538 CEP170Q5SW79 1584 aa31.9■■■□□ 2.7
TMEM120A-208ENST00000480538 SHROOM2Q13796 1616 aa31.78■■■□□ 2.68
TMEM120A-208ENST00000480538 ERCC6L2Q5T890 1561 aa31.73■■■□□ 2.67
TMEM120A-208ENST00000480538 KIF27Q86VH2 1401 aa31.62■■■□□ 2.65
TMEM120A-208ENST00000480538 RUSC2Q8N2Y8 1516 aa31.61■■■□□ 2.65
TMEM120A-208ENST00000480538 PRG4Q92954 1404 aaPredicted RBP31.6■■■□□ 2.65
TMEM120A-208ENST00000480538 CUL7Q14999 1698 aa31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms