RNA–Protein interactions for RNA: ENST00000480297.5

ACTA2-204, Transcript of actin, alpha 2, smooth muscle, aorta, humanhuman

TSL 2

Gene ACTA2, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA2-204ENST00000480297 NISCHQ9Y2I1 1504 aa35.24■■■■□ 3.23
ACTA2-204ENST00000480297 CCDC180Q9P1Z9 1646 aa31.45■■■□□ 2.62
ACTA2-204ENST00000480297 ABCC9O60706 1549 aa30.69■■■□□ 2.5
ACTA2-204ENST00000480297 RB1CC1Q8TDY2 1594 aa29.6■■■□□ 2.33
ACTA2-204ENST00000480297 NACADO15069 1562 aa29.57■■■□□ 2.32
ACTA2-204ENST00000480297 MYO15BQ96JP2 1530 aa29.43■■■□□ 2.3
ACTA2-204ENST00000480297 ZCCHC6Q5VYS8 1495 aaKnown RBP29.35■■■□□ 2.29
ACTA2-204ENST00000480297 DCAF8L2P0C7V8 631 aa29.29■■■□□ 2.28
ACTA2-204ENST00000480297 DCAF1Q9Y4B6 1507 aa29.25■■■□□ 2.27
ACTA2-204ENST00000480297 UNC13AQ9UPW8 1703 aa28.88■■■□□ 2.21
ACTA2-204ENST00000480297 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
ACTA2-204ENST00000480297 PABPN1Q86U42 306 aaKnown RBP eCLIP28.6■■■□□ 2.17
ACTA2-204ENST00000480297 SCRIBQ14160 1630 aa28.55■■■□□ 2.16
ACTA2-204ENST00000480297 SHROOM4Q9ULL8 1493 aa28.52■■■□□ 2.16
ACTA2-204ENST00000480297 DNAJC5BQ9UF47 199 aa28.2■■■□□ 2.1
ACTA2-204ENST00000480297 EIF4G1Q04637 1599 aaKnown RBP27.92■■■□□ 2.06
ACTA2-204ENST00000480297 CC2D2AQ9P2K1 1620 aa27.81■■■□□ 2.04
ACTA2-204ENST00000480297 CECR2Q9BXF3 1484 aa27.64■■■□□ 2.01
ACTA2-204ENST00000480297 SMARCA4P51532 1647 aa27.36■■□□□ 1.97
ACTA2-204ENST00000480297 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
ACTA2-204ENST00000480297 NCAPD3P42695 1498 aa27.26■■□□□ 1.95
ACTA2-204ENST00000480297 SMARCA2P51531 1590 aa27.24■■□□□ 1.95
ACTA2-204ENST00000480297 ATAD2BQ9ULI0 1458 aa27.23■■□□□ 1.95
ACTA2-204ENST00000480297 PEG3Q9GZU2 1588 aa27.16■■□□□ 1.94
ACTA2-204ENST00000480297 HMGXB3Q12766 1538 aa27.15■■□□□ 1.94
ACTA2-204ENST00000480297 MROH2BQ7Z745 1585 aa27.1■■□□□ 1.93
ACTA2-204ENST00000480297 BAZ1BQ9UIG0 1483 aaKnown RBP27■■□□□ 1.91
ACTA2-204ENST00000480297 WIZO95785 1651 aa26.79■■□□□ 1.88
ACTA2-204ENST00000480297 RSF1Q96T23 1441 aaPredicted RBP26.78■■□□□ 1.88
ACTA2-204ENST00000480297 TOP2AP11388 1531 aaKnown RBP26.58■■□□□ 1.85
ACTA2-204ENST00000480297 LAMC3Q9Y6N6 1575 aa26.57■■□□□ 1.84
ACTA2-204ENST00000480297 NESP48681 1621 aa26.52■■□□□ 1.84
ACTA2-204ENST00000480297 ERCC6Q03468 1493 aa26.5■■□□□ 1.83
ACTA2-204ENST00000480297 CADPSQ9ULU8 1353 aa26.43■■□□□ 1.82
ACTA2-204ENST00000480297 PDS5BQ9NTI5 1447 aa26.38■■□□□ 1.81
ACTA2-204ENST00000480297 CUX2O14529 1486 aa26.34■■□□□ 1.81
ACTA2-204ENST00000480297 CFTRP13569 1480 aa26.27■■□□□ 1.8
ACTA2-204ENST00000480297 KIF21AQ7Z4S6 1674 aa26.25■■□□□ 1.79
ACTA2-204ENST00000480297 THOC2Q8NI27 1593 aaKnown RBP26.23■■□□□ 1.79
ACTA2-204ENST00000480297 CCDC88BA6NC98 1476 aa26.22■■□□□ 1.79
ACTA2-204ENST00000480297 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
ACTA2-204ENST00000480297 CEP164Q9UPV0 1460 aa26.11■■□□□ 1.77
ACTA2-204ENST00000480297 PRDM2Q13029 1718 aa26.11■■□□□ 1.77
ACTA2-204ENST00000480297 MRC2Q9UBG0 1479 aa26.1■■□□□ 1.77
ACTA2-204ENST00000480297 WDR62O43379 1518 aa26.03■■□□□ 1.76
ACTA2-204ENST00000480297 SUPT5HO00267 1087 aaKnown RBP25.9■■□□□ 1.74
ACTA2-204ENST00000480297 URB2Q14146 1524 aaKnown RBP25.84■■□□□ 1.73
ACTA2-204ENST00000480297 ABCC8Q09428 1581 aa25.77■■□□□ 1.72
ACTA2-204ENST00000480297 TOPBP1Q92547 1522 aa25.69■■□□□ 1.7
ACTA2-204ENST00000480297 DNMBPQ6XZF7 1577 aa25.69■■□□□ 1.7
ACTA2-204ENST00000480297 IFT140Q96RY7 1462 aa25.59■■□□□ 1.69
ACTA2-204ENST00000480297 DNAJC5Q9H3Z4 198 aa25.55■■□□□ 1.68
ACTA2-204ENST00000480297 POLA1P09884 1462 aaPredicted RBP25.47■■□□□ 1.67
ACTA2-204ENST00000480297 CUX1P39880 1505 aa25.45■■□□□ 1.66
ACTA2-204ENST00000480297 TARBP1Q13395 1621 aaKnown RBP25.44■■□□□ 1.66
ACTA2-204ENST00000480297 ZNF608Q9ULD9 1512 aaPredicted RBP25.39■■□□□ 1.66
ACTA2-204ENST00000480297 FGD5Q6ZNL6 1462 aa25.37■■□□□ 1.65
ACTA2-204ENST00000480297 SOGA1O94964 1423 aa25.35■■□□□ 1.65
ACTA2-204ENST00000480297 EIF4G3O43432 1585 aaKnown RBP25.35■■□□□ 1.65
ACTA2-204ENST00000480297 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
ACTA2-204ENST00000480297 RAD54L2Q9Y4B4 1467 aa25.29■■□□□ 1.64
ACTA2-204ENST00000480297 WRNQ14191 1432 aaPredicted RBP eCLIP25.26■■□□□ 1.63
ACTA2-204ENST00000480297 BIVM-ERCC5R4GMW8 1640 aa25.26■■□□□ 1.63
ACTA2-204ENST00000480297 TOP2BQ02880 1626 aa25.25■■□□□ 1.63
ACTA2-204ENST00000480297 AQRO60306 1485 aaKnown RBP eCLIP25.23■■□□□ 1.63
ACTA2-204ENST00000480297 SYNJ1O43426 1573 aa25.18■■□□□ 1.62
ACTA2-204ENST00000480297 ABCA10Q8WWZ4 1543 aa25.17■■□□□ 1.62
ACTA2-204ENST00000480297 TDRD9Q8NDG6 1382 aaKnown RBP25.17■■□□□ 1.62
ACTA2-204ENST00000480297 OSCARQ8IYS5 282 aa25.15■■□□□ 1.62
ACTA2-204ENST00000480297 GRIN2BQ13224 1484 aa25.1■■□□□ 1.61
ACTA2-204ENST00000480297 ABCA5Q8WWZ7 1642 aa25.08■■□□□ 1.61
ACTA2-204ENST00000480297 GAPVD1Q14C86 1478 aa25.07■■□□□ 1.6
ACTA2-204ENST00000480297 MAGI1Q96QZ7 1491 aaPredicted RBP25.07■■□□□ 1.6
ACTA2-204ENST00000480297 SNAPC4Q5SXM2 1469 aa25.03■■□□□ 1.6
ACTA2-204ENST00000480297 PBRM1Q86U86 1689 aa25.03■■□□□ 1.6
ACTA2-204ENST00000480297 CHD1O14646 1710 aa25.03■■□□□ 1.6
ACTA2-204ENST00000480297 SYNJ2O15056 1496 aa24.95■■□□□ 1.58
ACTA2-204ENST00000480297 FBLN2P98095 1184 aa24.9■■□□□ 1.58
ACTA2-204ENST00000480297 ERICH3Q5RHP9 1530 aa24.9■■□□□ 1.58
ACTA2-204ENST00000480297 CHMP7Q8WUX9 453 aaPredicted RBP24.88■■□□□ 1.57
ACTA2-204ENST00000480297 ADAMTS12P58397 1594 aa24.84■■□□□ 1.57
ACTA2-204ENST00000480297 FHAD1B1AJZ9 1412 aa24.8■■□□□ 1.56
ACTA2-204ENST00000480297 CLASP1Q7Z460 1538 aa24.8■■□□□ 1.56
ACTA2-204ENST00000480297 RIMBP3CA6NJZ7 1639 aa24.76■■□□□ 1.55
ACTA2-204ENST00000480297 RIMBP3BA6NNM3 1639 aa24.76■■□□□ 1.55
ACTA2-204ENST00000480297 RIMBP3Q9UFD9 1639 aa24.76■■□□□ 1.55
ACTA2-204ENST00000480297 KIF27Q86VH2 1401 aa24.76■■□□□ 1.55
ACTA2-204ENST00000480297 GRIN2AQ12879 1464 aa24.76■■□□□ 1.55
ACTA2-204ENST00000480297 ARHGEF11O15085 1522 aa24.76■■□□□ 1.55
ACTA2-204ENST00000480297 NUP160Q12769 1436 aa24.68■■□□□ 1.54
ACTA2-204ENST00000480297 CUL7Q14999 1698 aa24.66■■□□□ 1.54
ACTA2-204ENST00000480297 IGF1RP08069 1367 aa24.64■■□□□ 1.53
ACTA2-204ENST00000480297 CEP170Q5SW79 1584 aa24.62■■□□□ 1.53
ACTA2-204ENST00000480297 TRIM41Q8WV44 630 aa24.57■■□□□ 1.52
ACTA2-204ENST00000480297 ARAP1Q96P48 1450 aa24.55■■□□□ 1.52
ACTA2-204ENST00000480297 SHROOM2Q13796 1616 aa24.51■■□□□ 1.51
ACTA2-204ENST00000480297 CARMIL1Q5VZK9 1371 aa24.49■■□□□ 1.51
ACTA2-204ENST00000480297 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
ACTA2-204ENST00000480297 CYB5RLQ6IPT4 315 aa24.45■■□□□ 1.5
ACTA2-204ENST00000480297 KIAA0586Q9BVV6 1533 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 194.8 ms