RNA–Protein interactions for RNA: ENST00000480176.5

SSR2-209, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 2

Gene SSR2, Length 1,040 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-209ENST00000480176 NISCHQ9Y2I1 1504 aa31.19■■■□□ 2.58
SSR2-209ENST00000480176 CCDC180Q9P1Z9 1646 aa27.49■■□□□ 1.99
SSR2-209ENST00000480176 ABCC9O60706 1549 aa26.48■■□□□ 1.83
SSR2-209ENST00000480176 ZCCHC6Q5VYS8 1495 aaKnown RBP26.05■■□□□ 1.76
SSR2-209ENST00000480176 DCAF8L2P0C7V8 631 aa26■■□□□ 1.75
SSR2-209ENST00000480176 DCAF1Q9Y4B6 1507 aa25.78■■□□□ 1.72
SSR2-209ENST00000480176 NACADO15069 1562 aa25.73■■□□□ 1.71
SSR2-209ENST00000480176 MYO15BQ96JP2 1530 aa25.69■■□□□ 1.7
SSR2-209ENST00000480176 RB1CC1Q8TDY2 1594 aa25.66■■□□□ 1.7
SSR2-209ENST00000480176 DNAJC5BQ9UF47 199 aa25.49■■□□□ 1.67
SSR2-209ENST00000480176 SCRIBQ14160 1630 aa25.18■■□□□ 1.62
SSR2-209ENST00000480176 UNC13AQ9UPW8 1703 aa25.09■■□□□ 1.61
SSR2-209ENST00000480176 SHROOM4Q9ULL8 1493 aa25.04■■□□□ 1.6
SSR2-209ENST00000480176 PABPN1Q86U42 306 aaKnown RBP eCLIP24.86■■□□□ 1.57
SSR2-209ENST00000480176 BICRAQ9NZM4 1560 aa24.84■■□□□ 1.57
SSR2-209ENST00000480176 CECR2Q9BXF3 1484 aa24.25■■□□□ 1.47
SSR2-209ENST00000480176 DNAJC5Q9H3Z4 198 aa24.19■■□□□ 1.46
SSR2-209ENST00000480176 EIF4G1Q04637 1599 aaKnown RBP24.16■■□□□ 1.46
SSR2-209ENST00000480176 BAZ1AQ9NRL2 1556 aaPredicted RBP24.14■■□□□ 1.45
SSR2-209ENST00000480176 SMARCA4P51532 1647 aa24.1■■□□□ 1.45
SSR2-209ENST00000480176 MROH2BQ7Z745 1585 aa24.06■■□□□ 1.44
SSR2-209ENST00000480176 RSF1Q96T23 1441 aaPredicted RBP23.96■■□□□ 1.43
SSR2-209ENST00000480176 CC2D2AQ9P2K1 1620 aa23.95■■□□□ 1.42
SSR2-209ENST00000480176 WIZO95785 1651 aa23.84■■□□□ 1.41
SSR2-209ENST00000480176 SMARCA2P51531 1590 aa23.84■■□□□ 1.41
SSR2-209ENST00000480176 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
SSR2-209ENST00000480176 ATAD2BQ9ULI0 1458 aa23.83■■□□□ 1.41
SSR2-209ENST00000480176 PEG3Q9GZU2 1588 aa23.81■■□□□ 1.4
SSR2-209ENST00000480176 NCAPD3P42695 1498 aa23.73■■□□□ 1.39
SSR2-209ENST00000480176 BAZ1BQ9UIG0 1483 aaKnown RBP23.69■■□□□ 1.38
SSR2-209ENST00000480176 HMGXB3Q12766 1538 aa23.65■■□□□ 1.38
SSR2-209ENST00000480176 TOP2AP11388 1531 aaKnown RBP23.59■■□□□ 1.37
SSR2-209ENST00000480176 CCDC88BA6NC98 1476 aa23.33■■□□□ 1.33
SSR2-209ENST00000480176 CADPSQ9ULU8 1353 aa23.09■■□□□ 1.29
SSR2-209ENST00000480176 LAMC3Q9Y6N6 1575 aa23.05■■□□□ 1.28
SSR2-209ENST00000480176 NESP48681 1621 aa23.04■■□□□ 1.28
SSR2-209ENST00000480176 CFTRP13569 1480 aa23.04■■□□□ 1.28
SSR2-209ENST00000480176 PRDM2Q13029 1718 aa22.94■■□□□ 1.26
SSR2-209ENST00000480176 PDS5BQ9NTI5 1447 aa22.9■■□□□ 1.26
SSR2-209ENST00000480176 CUX2O14529 1486 aa22.87■■□□□ 1.25
SSR2-209ENST00000480176 FANCD2Q9BXW9 1451 aa22.84■■□□□ 1.25
SSR2-209ENST00000480176 ERCC6Q03468 1493 aa22.8■■□□□ 1.24
SSR2-209ENST00000480176 KIF21AQ7Z4S6 1674 aa22.8■■□□□ 1.24
SSR2-209ENST00000480176 CEP164Q9UPV0 1460 aa22.77■■□□□ 1.24
SSR2-209ENST00000480176 TRIM41Q8WV44 630 aa22.71■■□□□ 1.23
SSR2-209ENST00000480176 ABCC8Q09428 1581 aa22.65■■□□□ 1.22
SSR2-209ENST00000480176 MRC2Q9UBG0 1479 aa22.61■■□□□ 1.21
SSR2-209ENST00000480176 WRNQ14191 1432 aaPredicted RBP eCLIP22.58■■□□□ 1.21
SSR2-209ENST00000480176 URB2Q14146 1524 aaKnown RBP22.57■■□□□ 1.2
SSR2-209ENST00000480176 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
SSR2-209ENST00000480176 CUX1P39880 1505 aa22.54■■□□□ 1.2
SSR2-209ENST00000480176 DNMBPQ6XZF7 1577 aa22.54■■□□□ 1.2
SSR2-209ENST00000480176 TOPBP1Q92547 1522 aa22.52■■□□□ 1.2
SSR2-209ENST00000480176 WDR62O43379 1518 aa22.5■■□□□ 1.19
SSR2-209ENST00000480176 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
SSR2-209ENST00000480176 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
SSR2-209ENST00000480176 TOP2BQ02880 1626 aa22.47■■□□□ 1.19
SSR2-209ENST00000480176 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
SSR2-209ENST00000480176 FGD5Q6ZNL6 1462 aa22.39■■□□□ 1.17
SSR2-209ENST00000480176 POLA1P09884 1462 aaPredicted RBP22.35■■□□□ 1.17
SSR2-209ENST00000480176 SOGA1O94964 1423 aa22.31■■□□□ 1.16
SSR2-209ENST00000480176 RAD54L2Q9Y4B4 1467 aa22.28■■□□□ 1.16
SSR2-209ENST00000480176 IFT140Q96RY7 1462 aa22.25■■□□□ 1.15
SSR2-209ENST00000480176 TARBP1Q13395 1621 aaKnown RBP22.23■■□□□ 1.15
SSR2-209ENST00000480176 ABCA10Q8WWZ4 1543 aa22.17■■□□□ 1.14
SSR2-209ENST00000480176 WDR97A6NE52 1622 aa22.15■■□□□ 1.14
SSR2-209ENST00000480176 TDRD9Q8NDG6 1382 aaKnown RBP22.12■■□□□ 1.13
SSR2-209ENST00000480176 ZNF608Q9ULD9 1512 aaPredicted RBP22.11■■□□□ 1.13
SSR2-209ENST00000480176 KIF27Q86VH2 1401 aa22.09■■□□□ 1.13
SSR2-209ENST00000480176 AQRO60306 1485 aaKnown RBP eCLIP22.08■■□□□ 1.12
SSR2-209ENST00000480176 EIF4G3O43432 1585 aaKnown RBP22.05■■□□□ 1.12
SSR2-209ENST00000480176 GAPVD1Q14C86 1478 aa22.05■■□□□ 1.12
SSR2-209ENST00000480176 RUSC2Q8N2Y8 1516 aa22.05■■□□□ 1.12
SSR2-209ENST00000480176 ABCA5Q8WWZ7 1642 aa22.04■■□□□ 1.12
SSR2-209ENST00000480176 FAM9AQ8IZU1 332 aaPredicted RBP22.03■■□□□ 1.12
SSR2-209ENST00000480176 EEA1Q15075 1411 aa21.98■■□□□ 1.11
SSR2-209ENST00000480176 PBRM1Q86U86 1689 aa21.98■■□□□ 1.11
SSR2-209ENST00000480176 GRIN2BQ13224 1484 aa21.96■■□□□ 1.11
SSR2-209ENST00000480176 ERICH3Q5RHP9 1530 aa21.92■■□□□ 1.1
SSR2-209ENST00000480176 IGF1RP08069 1367 aa21.92■■□□□ 1.1
SSR2-209ENST00000480176 CSRNP3Q8WYN3 585 aa21.92■■□□□ 1.1
SSR2-209ENST00000480176 SNAPC4Q5SXM2 1469 aa21.87■■□□□ 1.09
SSR2-209ENST00000480176 MAGI1Q96QZ7 1491 aaPredicted RBP21.84■■□□□ 1.09
SSR2-209ENST00000480176 CUL7Q14999 1698 aa21.83■■□□□ 1.09
SSR2-209ENST00000480176 CARMIL1Q5VZK9 1371 aa21.82■■□□□ 1.08
SSR2-209ENST00000480176 ADAMTS12P58397 1594 aa21.8■■□□□ 1.08
SSR2-209ENST00000480176 FHAD1B1AJZ9 1412 aa21.8■■□□□ 1.08
SSR2-209ENST00000480176 FBLN2P98095 1184 aa21.79■■□□□ 1.08
SSR2-209ENST00000480176 CHMP7Q8WUX9 453 aaPredicted RBP21.77■■□□□ 1.08
SSR2-209ENST00000480176 OSCARQ8IYS5 282 aa21.76■■□□□ 1.07
SSR2-209ENST00000480176 SYNJ2O15056 1496 aa21.76■■□□□ 1.07
SSR2-209ENST00000480176 PRXQ9BXM0 1461 aa21.76■■□□□ 1.07
SSR2-209ENST00000480176 EHMT2Q96KQ7 1210 aa21.74■■□□□ 1.07
SSR2-209ENST00000480176 RAPGEF2Q9Y4G8 1499 aa21.74■■□□□ 1.07
SSR2-209ENST00000480176 KIF21BO75037 1637 aa21.71■■□□□ 1.07
SSR2-209ENST00000480176 CHD1O14646 1710 aa21.7■■□□□ 1.06
SSR2-209ENST00000480176 GRIN2AQ12879 1464 aa21.68■■□□□ 1.06
SSR2-209ENST00000480176 GOLGA3Q08378 1498 aa21.65■■□□□ 1.06
SSR2-209ENST00000480176 UBTFP17480 764 aaKnown RBP21.63■■□□□ 1.05
SSR2-209ENST00000480176 AEBP2Q6ZN18 517 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms