RNA–Protein interactions for RNA: ENST00000480106.1

AGAP3-217, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 2

Gene AGAP3, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-217ENST00000480106 NISCHQ9Y2I1 1504 aa20.08■□□□□ 0.81
AGAP3-217ENST00000480106 CCDC180Q9P1Z9 1646 aa18.05■□□□□ 0.48
AGAP3-217ENST00000480106 ABCC9O60706 1549 aa17.74■□□□□ 0.43
AGAP3-217ENST00000480106 RB1CC1Q8TDY2 1594 aa17.02■□□□□ 0.32
AGAP3-217ENST00000480106 NACADO15069 1562 aa16.98■□□□□ 0.31
AGAP3-217ENST00000480106 MYO15BQ96JP2 1530 aa16.88■□□□□ 0.29
AGAP3-217ENST00000480106 ZCCHC6Q5VYS8 1495 aaKnown RBP16.73■□□□□ 0.27
AGAP3-217ENST00000480106 UNC13AQ9UPW8 1703 aa16.7■□□□□ 0.26
AGAP3-217ENST00000480106 DCAF1Q9Y4B6 1507 aa16.69■□□□□ 0.26
AGAP3-217ENST00000480106 BICRAQ9NZM4 1560 aa16.6■□□□□ 0.25
AGAP3-217ENST00000480106 DCAF8L2P0C7V8 631 aa16.53■□□□□ 0.24
AGAP3-217ENST00000480106 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
AGAP3-217ENST00000480106 SHROOM4Q9ULL8 1493 aa16.45■□□□□ 0.22
AGAP3-217ENST00000480106 PABPN1Q86U42 306 aaKnown RBP eCLIP16.44■□□□□ 0.22
AGAP3-217ENST00000480106 SCRIBQ14160 1630 aa16.32■□□□□ 0.2
AGAP3-217ENST00000480106 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
AGAP3-217ENST00000480106 CC2D2AQ9P2K1 1620 aa16.11■□□□□ 0.17
AGAP3-217ENST00000480106 CECR2Q9BXF3 1484 aa16■□□□□ 0.15
AGAP3-217ENST00000480106 NCAPD3P42695 1498 aa15.66■□□□□ 0.1
AGAP3-217ENST00000480106 SMARCA4P51532 1647 aa15.65■□□□□ 0.1
AGAP3-217ENST00000480106 ATAD2BQ9ULI0 1458 aa15.62■□□□□ 0.09
AGAP3-217ENST00000480106 HMGXB3Q12766 1538 aa15.61■□□□□ 0.09
AGAP3-217ENST00000480106 SMARCA2P51531 1590 aa15.58■□□□□ 0.09
AGAP3-217ENST00000480106 PEG3Q9GZU2 1588 aa15.58■□□□□ 0.09
AGAP3-217ENST00000480106 BAZ1AQ9NRL2 1556 aaPredicted RBP15.58■□□□□ 0.08
AGAP3-217ENST00000480106 MROH2BQ7Z745 1585 aa15.45■□□□□ 0.06
AGAP3-217ENST00000480106 BAZ1BQ9UIG0 1483 aaKnown RBP15.42■□□□□ 0.06
AGAP3-217ENST00000480106 CUX2O14529 1486 aa15.34■□□□□ 0.05
AGAP3-217ENST00000480106 NESP48681 1621 aa15.31■□□□□ 0.04
AGAP3-217ENST00000480106 LAMC3Q9Y6N6 1575 aa15.29■□□□□ 0.04
AGAP3-217ENST00000480106 ERCC6Q03468 1493 aa15.27■□□□□ 0.04
AGAP3-217ENST00000480106 WIZO95785 1651 aa15.25■□□□□ 0.03
AGAP3-217ENST00000480106 THOC2Q8NI27 1593 aaKnown RBP15.25■□□□□ 0.03
AGAP3-217ENST00000480106 RSF1Q96T23 1441 aaPredicted RBP15.17■□□□□ 0.02
AGAP3-217ENST00000480106 KIF21AQ7Z4S6 1674 aa15.16■□□□□ 0.02
AGAP3-217ENST00000480106 CADPSQ9ULU8 1353 aa15.13■□□□□ 0.01
AGAP3-217ENST00000480106 TOP2AP11388 1531 aaKnown RBP15.12■□□□□ 0.01
AGAP3-217ENST00000480106 PDS5BQ9NTI5 1447 aa15.12■□□□□ 0.01
AGAP3-217ENST00000480106 DNAJC5Q9H3Z4 198 aa15.08■□□□□ 0
AGAP3-217ENST00000480106 CFTRP13569 1480 aa15.05■□□□□ -0
AGAP3-217ENST00000480106 WDR62O43379 1518 aa15.05■□□□□ -0
AGAP3-217ENST00000480106 MRC2Q9UBG0 1479 aa15.02■□□□□ -0
AGAP3-217ENST00000480106 CEP164Q9UPV0 1460 aa14.97□□□□□ -0.01
AGAP3-217ENST00000480106 FANCD2Q9BXW9 1451 aa14.96□□□□□ -0.01
AGAP3-217ENST00000480106 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
AGAP3-217ENST00000480106 CCDC88BA6NC98 1476 aa14.89□□□□□ -0.03
AGAP3-217ENST00000480106 URB2Q14146 1524 aaKnown RBP14.87□□□□□ -0.03
AGAP3-217ENST00000480106 TOPBP1Q92547 1522 aa14.72□□□□□ -0.05
AGAP3-217ENST00000480106 DNMBPQ6XZF7 1577 aa14.7□□□□□ -0.06
AGAP3-217ENST00000480106 ABCC8Q09428 1581 aa14.68□□□□□ -0.06
AGAP3-217ENST00000480106 IFT140Q96RY7 1462 aa14.68□□□□□ -0.06
AGAP3-217ENST00000480106 ZNF608Q9ULD9 1512 aaPredicted RBP14.64□□□□□ -0.07
AGAP3-217ENST00000480106 TARBP1Q13395 1621 aaKnown RBP14.63□□□□□ -0.07
AGAP3-217ENST00000480106 EIF4G3O43432 1585 aaKnown RBP14.61□□□□□ -0.07
AGAP3-217ENST00000480106 POLA1P09884 1462 aaPredicted RBP14.59□□□□□ -0.07
AGAP3-217ENST00000480106 WDR97A6NE52 1622 aa14.54□□□□□ -0.08
AGAP3-217ENST00000480106 CUX1P39880 1505 aa14.53□□□□□ -0.08
AGAP3-217ENST00000480106 OSCARQ8IYS5 282 aa14.49□□□□□ -0.09
AGAP3-217ENST00000480106 FGD5Q6ZNL6 1462 aa14.49□□□□□ -0.09
AGAP3-217ENST00000480106 AQRO60306 1485 aaKnown RBP eCLIP14.47□□□□□ -0.094e-7■■■■■ 29.2
AGAP3-217ENST00000480106 RAD54L2Q9Y4B4 1467 aa14.46□□□□□ -0.09
AGAP3-217ENST00000480106 CHD1O14646 1710 aa14.45□□□□□ -0.1
AGAP3-217ENST00000480106 SOGA1O94964 1423 aa14.43□□□□□ -0.1
AGAP3-217ENST00000480106 RIMBP3CA6NJZ7 1639 aa14.43□□□□□ -0.1
AGAP3-217ENST00000480106 RIMBP3BA6NNM3 1639 aa14.43□□□□□ -0.1
AGAP3-217ENST00000480106 RIMBP3Q9UFD9 1639 aa14.43□□□□□ -0.1
AGAP3-217ENST00000480106 ARHGEF11O15085 1522 aa14.4□□□□□ -0.1
AGAP3-217ENST00000480106 ABCA5Q8WWZ7 1642 aa14.38□□□□□ -0.11
AGAP3-217ENST00000480106 MAGI1Q96QZ7 1491 aaPredicted RBP14.38□□□□□ -0.11
AGAP3-217ENST00000480106 BIVM-ERCC5R4GMW8 1640 aa14.37□□□□□ -0.11
AGAP3-217ENST00000480106 ABCA10Q8WWZ4 1543 aa14.37□□□□□ -0.11
AGAP3-217ENST00000480106 SNAPC4Q5SXM2 1469 aa14.37□□□□□ -0.11
AGAP3-217ENST00000480106 TDRD9Q8NDG6 1382 aaKnown RBP14.36□□□□□ -0.11
AGAP3-217ENST00000480106 CLASP1Q7Z460 1538 aa14.36□□□□□ -0.11
AGAP3-217ENST00000480106 GRIN2BQ13224 1484 aa14.35□□□□□ -0.11
AGAP3-217ENST00000480106 TOP2BQ02880 1626 aa14.34□□□□□ -0.11
AGAP3-217ENST00000480106 PBRM1Q86U86 1689 aa14.34□□□□□ -0.11
AGAP3-217ENST00000480106 SUPT5HO00267 1087 aaKnown RBP14.33□□□□□ -0.12
AGAP3-217ENST00000480106 TRIM41Q8WV44 630 aa14.32□□□□□ -0.12
AGAP3-217ENST00000480106 SYNJ1O43426 1573 aa14.31□□□□□ -0.12
AGAP3-217ENST00000480106 SYNJ2O15056 1496 aa14.31□□□□□ -0.12
AGAP3-217ENST00000480106 GAPVD1Q14C86 1478 aa14.3□□□□□ -0.12
AGAP3-217ENST00000480106 ARAP1Q96P48 1450 aa14.28□□□□□ -0.12
AGAP3-217ENST00000480106 WRNQ14191 1432 aaPredicted RBP eCLIP14.27□□□□□ -0.12
AGAP3-217ENST00000480106 ADAMTS12P58397 1594 aa14.25□□□□□ -0.13
AGAP3-217ENST00000480106 ERICH3Q5RHP9 1530 aa14.2□□□□□ -0.14
AGAP3-217ENST00000480106 GRIN2AQ12879 1464 aa14.18□□□□□ -0.14
AGAP3-217ENST00000480106 NUP160Q12769 1436 aa14.18□□□□□ -0.14
AGAP3-217ENST00000480106 FBLN2P98095 1184 aa14.17□□□□□ -0.14
AGAP3-217ENST00000480106 CEP170Q5SW79 1584 aa14.15□□□□□ -0.14
AGAP3-217ENST00000480106 CHMP7Q8WUX9 453 aaPredicted RBP14.15□□□□□ -0.14
AGAP3-217ENST00000480106 SHROOM2Q13796 1616 aa14.14□□□□□ -0.15
AGAP3-217ENST00000480106 FHAD1B1AJZ9 1412 aa14.14□□□□□ -0.15
AGAP3-217ENST00000480106 CYB5RLQ6IPT4 315 aa14.1□□□□□ -0.15
AGAP3-217ENST00000480106 ERCC6L2Q5T890 1561 aa14.08□□□□□ -0.16
AGAP3-217ENST00000480106 RUSC2Q8N2Y8 1516 aa14.05□□□□□ -0.16
AGAP3-217ENST00000480106 CUL7Q14999 1698 aa14.01□□□□□ -0.17
AGAP3-217ENST00000480106 KIF27Q86VH2 1401 aa13.98□□□□□ -0.17
AGAP3-217ENST00000480106 IGF1RP08069 1367 aa13.97□□□□□ -0.17
AGAP3-217ENST00000480106 KIAA0586Q9BVV6 1533 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms